Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:42 (733227): wrapper (7.7.26015): starting
12:52:42 (733227): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 12:52:42] Arguments: --nthreads 12
[2025-10-13 12:52:42] Threads: 12
[2025-10-13 12:52:42] Checking for CVMFS
[2025-10-13 12:52:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:52:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:52:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:52:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:52:44] 2.13.1.0 733444 0 30872 151658 3 1 3369893 4097025 0 130560 0 0 0.000 1291 11226 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 12:52:44] CVMFS is ok
[2025-10-13 12:52:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:52:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:52:44] Further information can be found at the LHC@home message board.
[2025-10-13 12:52:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:52:44] Checking for apptainer binary...
[2025-10-13 12:52:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 12:52:44] apptainer is not installed, using version from CVMFS
[2025-10-13 12:52:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:52:44] pckelar6.cern.ch
[2025-10-13 12:52:44] apptainer works
[2025-10-13 12:52:44] Set ATHENA_PROC_NUMBER=12
[2025-10-13 12:52:44] Set ATHENA_CORE_NUMBER=12
[2025-10-13 12:52:44] Starting ATLAS job with PandaID=6840531144
[2025-10-13 12:52:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:59:27]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:59:27] 2025-10-13 12:00:54,817 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840531144/log.46676269._085586.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._085586.job
[2025-10-13 18:59:27] 2025-10-13 12:00:54,855 | INFO     | adding to output.list: log.46676269._085586.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/89/log.46676269._085586.job.log.tg
[2025-10-13 18:59:27] 2025-10-13 12:00:54,856 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 18:59:27] 2025-10-13 12:00:54,856 | INFO     | summary of transferred files:
[2025-10-13 18:59:27] 2025-10-13 12:00:54,856 | INFO     |  -- lfn=log.46676269._085586.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 18:59:27] 2025-10-13 12:00:54,857 | INFO     | stage-out finished correctly
[2025-10-13 18:59:27] 2025-10-13 12:00:55,108 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 18:59:27] 2025-10-13 12:00:56,029 | INFO     | time since job start (4083s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:00:56,156 | INFO     | monitor loop #303: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:00:56,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:00:57,890 | INFO     | job 6840531144 has state=finished
[2025-10-13 18:59:27] 2025-10-13 12:00:57,890 | INFO     | preparing for final server update for job 6840531144 in state='finished'
[2025-10-13 18:59:27] 2025-10-13 12:00:57,891 | INFO     | this job has now completed (state=finished)
[2025-10-13 18:59:27] 2025-10-13 12:00:57,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 18:59:27] 2025-10-13 12:00:57,891 | INFO     | log transfer has been attempted: DONE
[2025-10-13 18:59:27] 2025-10-13 12:00:57,891 | INFO     | job 6840531144 has finished - writing final server update
[2025-10-13 18:59:27] 2025-10-13 12:00:57,891 | INFO     | total number of processed events: 400 (read)
[2025-10-13 18:59:27] 2025-10-13 12:00:57,894 | INFO     | executing command: lscpu
[2025-10-13 18:59:27] 2025-10-13 12:00:57,945 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 18:59:27] 2025-10-13 12:00:58,034 | INFO     | time since job start (4085s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:00:58,659 | INFO     | monitor loop #304: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:00:58,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:01:00,042 | INFO     | time since job start (4087s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:01:01,162 | INFO     | monitor loop #305: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:01:01,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:01:02,047 | INFO     | time since job start (4089s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:01:03,665 | INFO     | monitor loop #306: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:01:03,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:01:04,052 | INFO     | time since job start (4091s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:01:06,057 | INFO     | time since job start (4093s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:01:06,168 | INFO     | monitor loop #307: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:01:06,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:01:08,062 | INFO     | time since job start (4095s) is within the limit (172800.0s)
[2025-10-13 18:59:27] 2025-10-13 12:01:08,671 | INFO     | monitor loop #308: job 0:6840531144 is in state 'finished'
[2025-10-13 18:59:27] 2025-10-13 12:01:08,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,276 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 18:59:27] 2025-10-13 12:01:09,279 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2800.069
[2025-10-13 18:59:27] 2025-10-13 12:01:09,281 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840531144/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,282 | INFO     | extracted standard info from prmon json
[2025-10-13 18:59:27] 2025-10-13 12:01:09,282 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:59:27] 2025-10-13 12:01:09,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:59:27] 2025-10-13 12:01:09,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:59:27] 2025-10-13 12:01:09,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | sum of square deviations: 66959395.0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | sum of deviations: -5813031874.5
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | mean x: 1760354901.5
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | mean y: 2811444.0166666666
[2025-10-13 18:59:27] 2025-10-13 12:01:09,286 | INFO     | -- intersect: 152826760239.4293
[2025-10-13 18:59:27] 2025-10-13 12:01:09,287 | INFO     | intersect: 152826760239.4293
[2025-10-13 18:59:27] 2025-10-13 12:01:09,287 | INFO     | chi2: 0.09650243236744842
[2025-10-13 18:59:27] 2025-10-13 12:01:09,287 | INFO     | -- intersect: 152826760239.4293
[2025-10-13 18:59:27] 2025-10-13 12:01:09,287 | INFO     | current memory leak: -86.81 B/s (using 60 data points, chi2=0.10)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,287 | INFO     | could have reported an average CPU frequency of 2819 MHz (6 samples)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | ..............................
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . Timing measurements:
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . get job = 0 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . initial setup = 1 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . payload setup = 6 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . stage-in = 0 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . payload execution = 4057 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . stage-out = 0 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | . log creation = 0 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,288 | INFO     | ..............................
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | 
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | job summary report
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | --------------------------------------------------
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | PanDA job id: 6840531144
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | task id: 46676269
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | errors: (none)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | pilot state: finished 
[2025-10-13 18:59:27] 2025-10-13 12:01:09,366 | INFO     | transexitcode: 0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | exeerrorcode: 0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | exeerrordiag: 
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | exitcode: 0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | exitmsg: OK
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | cpuconsumptiontime: 43057 s
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | nevents: 400
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | neventsw: 0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | pid: 744901
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | pgrp: 744901
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | corecount: 12
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | event service: False
[2025-10-13 18:59:27] 2025-10-13 12:01:09,367 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 4067: 2375093, 4068: 2384147, 4082: 2384285}
[2025-10-13 18:59:27] 2025-10-13 12:01:09,368 | INFO     | --------------------------------------------------
[2025-10-13 18:59:27] 2025-10-13 12:01:09,368 | INFO     | 
[2025-10-13 18:59:27] 2025-10-13 12:01:09,368 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 18:59:27] 2025-10-13 12:01:09,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | job 6840531144 has completed (purged errors)
[2025-10-13 18:59:27] 2025-10-13 12:01:09,403 | INFO     | overall cleanup function is called
[2025-10-13 18:59:27] 2025-10-13 12:01:10,410 | INFO     | --- collectZombieJob: --- 10, [744901]
[2025-10-13 18:59:27] 2025-10-13 12:01:10,410 | INFO     | zombie collector waiting for pid 744901
[2025-10-13 18:59:27] 2025-10-13 12:01:10,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:59:27] 2025-10-13 12:01:10,410 | INFO     | collected zombie processes
[2025-10-13 18:59:27] 2025-10-13 12:01:10,410 | INFO     | will attempt to kill all subprocesses of pid=744901
[2025-10-13 18:59:27] 2025-10-13 12:01:10,521 | INFO     | process IDs to be killed: [744901] (in reverse order)
[2025-10-13 18:59:27] 2025-10-13 12:01:10,563 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:59:27] 2025-10-13 12:01:10,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:59:27] 2025-10-13 12:01:10,567 | INFO     | did not find any defunct processes belonging to 744901
[2025-10-13 18:59:27] 2025-10-13 12:01:10,569 | INFO     | did not find any defunct processes belonging to 744901
[2025-10-13 18:59:27] 2025-10-13 12:01:10,569 | INFO     | ready for new job
[2025-10-13 18:59:27] 2025-10-13 12:01:10,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:59:27] 2025-10-13 12:01:10,575 | INFO     | ***************************************
[2025-10-13 18:59:27] 2025-10-13 12:01:10,575 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:59:27] 2025-10-13 12:01:10,575 | INFO     | ***************************************
[2025-10-13 18:59:27] 2025-10-13 12:01:10,575 | INFO     | 
[2025-10-13 18:59:27] 2025-10-13 12:01:10,576 | INFO     | architecture information:
[2025-10-13 18:59:27] 2025-10-13 12:01:10,576 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:59:27] 2025-10-13 12:01:10,586 | INFO     | cat /etc/os-release:
[2025-10-13 18:59:27] NAME="CentOS Linux"
[2025-10-13 18:59:27] VERSION="7 (Core)"
[2025-10-13 18:59:27] ID="centos"
[2025-10-13 18:59:27] ID_LIKE="rhel fedora"
[2025-10-13 18:59:27] VERSION_ID="7"
[2025-10-13 18:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:59:27] ANSI_COLOR="0;31"
[2025-10-13 18:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:59:27] HOME_URL="https://www.centos.org/"
[2025-10-13 18:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:59:27] 
[2025-10-13 18:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:59:27] 
[2025-10-13 18:59:27] 2025-10-13 12:01:10,587 | INFO     | ***************************************
[2025-10-13 18:59:27] 2025-10-13 12:01:11,089 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 18:59:27] 2025-10-13 12:01:11,126 | INFO     | sufficient remaining disk space (871105560576 B)
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | INFO     | update_server=False
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:59:27] 2025-10-13 12:01:11,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:27] 2025-10-13 12:01:11,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:59:27] 2025-10-13 12:01:11,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:59:27] 2025-10-13 12:01:11,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:59:27] 2025-10-13 12:01:11,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:27] 2025-10-13 12:01:11,174 | INFO     | will abort loop
[2025-10-13 18:59:27] 2025-10-13 12:01:11,540 | INFO     | all payload control threads have been joined
[2025-10-13 18:59:27] 2025-10-13 12:01:11,696 | INFO     | all job control threads have been joined
[2025-10-13 18:59:27] 2025-10-13 12:01:11,738 | INFO     | all data control threads have been joined
[2025-10-13 18:59:27] 2025-10-13 12:01:12,132 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,133 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,179 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,402 | INFO     | [job] validate thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,545 | INFO     | [payload] control thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,701 | INFO     | [job] control thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,706 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,743 | INFO     | [data] control thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,777 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:12,972 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:13,093 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:13,126 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:13,133 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:15,134 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:59:27] 2025-10-13 12:01:41,244 | INFO     | PID=737568 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 18:59:27] 2025-10-13 12:01:41,244 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:59:27] 2025-10-13 12:01:41,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:59:27] 2025-10-13 12:01:41,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:59:27] 2025-10-13 12:01:59,361 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:59:27] 2025-10-13 12:02:00,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723737810752)>', '<ExcThread(monitor, started 139722928154368)>']
[2025-10-13 18:59:27] 2025-10-13 12:02:00,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:59:27] 2025-10-13 12:02:00,340 | INFO     | [monitor] control thread has ended
[2025-10-13 18:59:27] 2025-10-13 12:02:05,286 | INFO     | all workflow threads have been joined
[2025-10-13 18:59:27] 2025-10-13 12:02:05,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:59:27] 2025-10-13 12:02:05,286 | INFO     | traces error code: 0
[2025-10-13 18:59:27] 2025-10-13 12:02:05,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:59:27] 2025-10-13 12:02:05,418 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:59:27] 2025-10-13 12:02:05,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:59:27] 2025-10-13 12:02:05,442 [wrapper] pilotpid: 737568
[2025-10-13 18:59:27] 2025-10-13 12:02:05,453 [wrapper] Pilot exit status: 0
[2025-10-13 18:59:27] 2025-10-13 12:02:05,492 [wrapper] pandaids: 6840531144
[2025-10-13 18:59:27] 2025-10-13 12:02:05,535 [wrapper] cleanup supervisor_pilot  759681 737569
[2025-10-13 18:59:27] 2025-10-13 12:02:05,544 [wrapper] Test setup, not cleaning
[2025-10-13 18:59:27] 2025-10-13 12:02:05,549 [wrapper] apfmon messages muted
[2025-10-13 18:59:27] 2025-10-13 12:02:05,555 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:59:27] 2025-10-13 12:02:05,564 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:59:27]  *** Error codes and diagnostics ***
[2025-10-13 18:59:27]     "exeErrorCode": 0,
[2025-10-13 18:59:27]     "exeErrorDiag": "",
[2025-10-13 18:59:27]     "pilotErrorCode": 0,
[2025-10-13 18:59:27]     "pilotErrorDiag": "",
[2025-10-13 18:59:27]  *** Listing of results directory ***
[2025-10-13 18:59:27] total 409428
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc    557409 Oct 12 19:57 pilot3.tar.gz
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc      5112 Oct 12 20:02 queuedata.json
[2025-10-13 18:59:27] -rwx------. 1 boinc boinc     36292 Oct 12 20:03 runpilot2-wrapper.sh
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc       100 Oct 13 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:59:27] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 12:52 run_atlas
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc       105 Oct 13 12:52 job.xml
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc 220953595 Oct 13 12:52 EVNT.46676267._004383.pool.root.1
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:52 start_atlas.sh
[2025-10-13 18:59:27] drwxrwx--x. 2 boinc boinc        68 Oct 13 12:52 shared
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc    569680 Oct 13 12:52 input.tar.gz
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc      6291 Oct 13 12:52 init_data.xml
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc         0 Oct 13 12:52 boinc_lockfile
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc      2550 Oct 13 12:52 pandaJob.out
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc    972497 Oct 13 12:52 agis_schedconf.cvmfs.json
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc   1560580 Oct 13 12:52 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:59:27] drwx------. 5 boinc boinc      4096 Oct 13 12:52 pilot3
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc 192446782 Oct 13 14:00 HITS.46676269._085586.pool.root.1
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc       530 Oct 13 14:00 boinc_task_state.xml
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc        95 Oct 13 14:00 pilot_heartbeat.json
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc      1015 Oct 13 14:00 memory_monitor_summary.json
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc    381608 Oct 13 14:00 log.46676269._085586.job.log.tgz.1
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc      7789 Oct 13 14:01 heartbeat.json
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc      4934 Oct 13 14:02 pilotlog.txt
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc    598348 Oct 13 14:02 log.46676269._085586.job.log.1
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc       357 Oct 13 14:02 output.list
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc       620 Oct 13 14:02 runtime_log
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc   1003520 Oct 13 14:02 result.tar.gz
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc       657 Oct 13 14:02 u5RMDmHbFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFdUMDmPnFDBo.diag
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc      8727 Oct 13 14:02 runtime_log.err
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc      8192 Oct 13 18:59 boinc_mmap_file
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc        27 Oct 13 18:59 wrapper_checkpoint.txt
[2025-10-13 18:59:27] -rw-r--r--. 1 boinc boinc     22435 Oct 13 18:59 stderr.txt
[2025-10-13 18:59:27] HITS file was successfully produced:
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc 192446782 Oct 13 14:00 shared/HITS.pool.root.1
[2025-10-13 18:59:27]  *** Contents of shared directory: ***
[2025-10-13 18:59:27] total 405272
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc 220953595 Oct 13 12:52 ATLAS.root_0
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc     15120 Oct 13 12:52 start_atlas.sh
[2025-10-13 18:59:27] -rw-r--r--. 2 boinc boinc    569680 Oct 13 12:52 input.tar.gz
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc 192446782 Oct 13 14:00 HITS.pool.root.1
[2025-10-13 18:59:27] -rw-------. 1 boinc boinc   1003520 Oct 13 14:02 result.tar.gz
18:59:28 (733227): run_atlas exited; CPU time 43077.228681
18:59:28 (733227): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN