Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:22 (3301363): wrapper (7.7.26015): starting
09:13:22 (3301363): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:13:22] Arguments: --nthreads 3
[2025-10-13 09:13:22] Threads: 3
[2025-10-13 09:13:22] Checking for CVMFS
[2025-10-13 09:13:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:13:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:13:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:13:25] 2.9.2.0 1615862 5398 85552 151653 4 1 31616643 36864001 0 130560 0 4267903 99.991 188071 905 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:13:25] CVMFS is ok
[2025-10-13 09:13:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:13:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:13:25] Further information can be found at the LHC@home message board.
[2025-10-13 09:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:13:25] Checking for apptainer binary...
[2025-10-13 09:13:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:13:25] Running /usr/bin/apptainer --version
[2025-10-13 09:13:25] apptainer version 1.4.1-1.1
[2025-10-13 09:13:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:13:25] thA323
[2025-10-13 09:13:25] apptainer works
[2025-10-13 09:13:25] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:13:25] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:13:25] Starting ATLAS job with PandaID=6840182028
[2025-10-13 09:13:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:38:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:38:43] 2025-10-13 08:38:02,623 | INFO     | [data] control thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:02,624 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:03,236 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:03,265 | INFO     | [job] control thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:03,296 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:04,778 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:38:43] 2025-10-13 08:38:29,198 | INFO     | 5069s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 10:38:43] 2025-10-13 08:38:30,265 | INFO     | PID=3305079 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:38:43] 2025-10-13 08:38:30,265 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:38:43] 2025-10-13 08:38:30,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:38:43] 2025-10-13 08:38:30,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:38:43] 2025-10-13 08:38:37,051 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:38:43] 2025-10-13 08:38:38,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789638010688)>', '<ExcThread(monitor, started 139788619339520)>']
[2025-10-13 10:38:43] 2025-10-13 08:38:39,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:38:43] 2025-10-13 08:38:39,310 | INFO     | [monitor] control thread has ended
[2025-10-13 10:38:43] 2025-10-13 08:38:43,602 | INFO     | all workflow threads have been joined
[2025-10-13 10:38:43] 2025-10-13 08:38:43,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:38:43] 2025-10-13 08:38:43,602 | INFO     | traces error code: 0
[2025-10-13 10:38:43] 2025-10-13 08:38:43,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:38:43] 2025-10-13 08:38:43,656 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:38:43] 2025-10-13 08:38:43,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:38:43] 2025-10-13 08:38:43,661 [wrapper] pilotpid: 3305079
[2025-10-13 10:38:43] 2025-10-13 08:38:43,664 [wrapper] Pilot exit status: 0
[2025-10-13 10:38:43] 2025-10-13 08:38:43,671 [wrapper] pandaids: 6840182028
[2025-10-13 10:38:43] 2025-10-13 08:38:43,691 [wrapper] cleanup supervisor_pilot 3323887 3305080
[2025-10-13 10:38:43] 2025-10-13 08:38:43,693 [wrapper] Test setup, not cleaning
[2025-10-13 10:38:43] 2025-10-13 08:38:43,696 [wrapper] apfmon messages muted
[2025-10-13 10:38:43] 2025-10-13 08:38:43,698 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:38:43] 2025-10-13 08:38:43,701 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:38:43]  *** Error codes and diagnostics ***
[2025-10-13 10:38:43]     "exeErrorCode": 0,
[2025-10-13 10:38:43]     "exeErrorDiag": "",
[2025-10-13 10:38:43]     "pilotErrorCode": 0,
[2025-10-13 10:38:43]     "pilotErrorDiag": "",
[2025-10-13 10:38:43]  *** Listing of results directory ***
[2025-10-13 10:38:43] total 414672
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:34 queuedata.json
[2025-10-13 10:38:43] -rwx------ 1 boinc boinc     36292 Oct 12 16:34 runpilot2-wrapper.sh
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:38:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:13 run_atlas
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:13 job.xml
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc 219028773 Oct 13 09:13 EVNT.46676267._004338.pool.root.1
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:13 input.tar.gz
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:13 start_atlas.sh
[2025-10-13 10:38:43] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:13 shared
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:13 boinc_setup_complete
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      6446 Oct 13 09:13 init_data.xml
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:13 boinc_lockfile
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      2549 Oct 13 09:13 pandaJob.out
[2025-10-13 10:38:43] -rw------- 1 boinc boinc    972849 Oct 13 09:13 agis_schedconf.cvmfs.json
[2025-10-13 10:38:43] -rw------- 1 boinc boinc   1560580 Oct 13 09:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:38:43] drwx------ 5 boinc boinc      4096 Oct 13 09:13 pilot3
[2025-10-13 10:38:43] -rw------- 1 boinc boinc 199738363 Oct 13 10:37 HITS.46676269._080888.pool.root.1
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc       530 Oct 13 10:37 boinc_task_state.xml
[2025-10-13 10:38:43] -rw------- 1 boinc boinc      1017 Oct 13 10:37 memory_monitor_summary.json
[2025-10-13 10:38:43] -rw------- 1 boinc boinc    243922 Oct 13 10:37 log.46676269._080888.job.log.tgz.1
[2025-10-13 10:38:43] -rw------- 1 boinc boinc        95 Oct 13 10:37 pilot_heartbeat.json
[2025-10-13 10:38:43] -rw------- 1 boinc boinc      7753 Oct 13 10:37 heartbeat.json
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:38 boinc_mmap_file
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:38 wrapper_checkpoint.txt
[2025-10-13 10:38:43] -rw------- 1 boinc boinc      4867 Oct 13 10:38 pilotlog.txt
[2025-10-13 10:38:43] -rw------- 1 boinc boinc    742033 Oct 13 10:38 log.46676269._080888.job.log.1
[2025-10-13 10:38:43] -rw------- 1 boinc boinc       357 Oct 13 10:38 output.list
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:38 runtime_log
[2025-10-13 10:38:43] -rw------- 1 boinc boinc   1003520 Oct 13 10:38 result.tar.gz
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      8777 Oct 13 10:38 runtime_log.err
[2025-10-13 10:38:43] -rw------- 1 boinc boinc       658 Oct 13 10:38 ognKDmlKCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmu7TMDm10HHCo.diag
[2025-10-13 10:38:43] -rw-r--r-- 1 boinc boinc      5437 Oct 13 10:38 stderr.txt
[2025-10-13 10:38:43] HITS file was successfully produced:
[2025-10-13 10:38:43] -rw------- 1 boinc boinc 199738363 Oct 13 10:37 shared/HITS.pool.root.1
[2025-10-13 10:38:43]  *** Contents of shared directory: ***
[2025-10-13 10:38:43] total 410520
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc 219028773 Oct 13 09:13 ATLAS.root_0
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc    569680 Oct 13 09:13 input.tar.gz
[2025-10-13 10:38:43] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:13 start_atlas.sh
[2025-10-13 10:38:43] -rw------- 1 boinc boinc 199738363 Oct 13 10:37 HITS.pool.root.1
[2025-10-13 10:38:43] -rw------- 1 boinc boinc   1003520 Oct 13 10:38 result.tar.gz
10:38:44 (3301363): run_atlas exited; CPU time 14521.156380
10:38:44 (3301363): called boinc_finish(0)

</stderr_txt>
]]>

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