Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 10:24:57 (315064): vboxwrapper version 26210
2025-10-13 10:24:57 (315064): BOINC client version: 7.24.1
2025-10-13 10:24:57 (315064): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-10-13 10:24:57 (315064): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 10:24:57 (315064): Create VM. (boinc_fcb7756e1592fbff, slot#0)
2025-10-13 10:24:57 (315064): Setting Memory Size for VM. (4800MB)
2025-10-13 10:24:57 (315064): Setting CPU Count for VM. (8)
2025-10-13 10:24:57 (315064): Setting Chipset Options for VM.
2025-10-13 10:24:57 (315064): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 10:24:57 (315064): Setting Boot Options for VM.
2025-10-13 10:24:57 (315064): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 10:24:57 (315064): Enabling VM Network Access.
2025-10-13 10:24:57 (315064): Disabling USB Support for VM.
2025-10-13 10:24:57 (315064): Disabling COM Port Support for VM.
2025-10-13 10:24:58 (315064): Disabling LPT Port Support for VM.
2025-10-13 10:24:58 (315064): Disabling Audio Support for VM.
2025-10-13 10:24:58 (315064): Disabling Clipboard Support for VM.
2025-10-13 10:24:58 (315064): Disabling Drag and Drop Support for VM.
2025-10-13 10:24:58 (315064): Adding storage controller(s) to VM.
2025-10-13 10:24:58 (315064): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 10:24:58 (315064): Adding VirtualBox Guest Additions to VM.
2025-10-13 10:24:58 (315064): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 10:24:58 (315064): forwarding host port 41719 to guest port 80
2025-10-13 10:24:59 (315064): Enabling remote desktop for VM.
2025-10-13 10:24:59 (315064): Enabling shared directory for VM.
2025-10-13 10:24:59 (315064): Starting VM using VBoxManage interface. (boinc_fcb7756e1592fbff, slot#0)
2025-10-13 10:25:00 (315064): Successfully started VM. (PID = '315564')
2025-10-13 10:25:00 (315064): Reporting VM Process ID to BOINC.
2025-10-13 10:25:00 (315064): Guest Log: BIOS: VirtualBox 7.0.16
2025-10-13 10:25:00 (315064): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 10:25:00 (315064): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 10:25:00 (315064): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 10:25:00 (315064): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 10:25:00 (315064): Detected: Web Application Enabled (http://localhost:41719)
2025-10-13 10:25:00 (315064): Detected: Remote Desktop Enabled (localhost:42091)
2025-10-13 10:25:00 (315064): Preference change detected
2025-10-13 10:25:00 (315064): Setting CPU throttle for VM. (100%)
2025-10-13 10:25:00 (315064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 10:25:02 (315064): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 10:25:02 (315064): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 10:25:04 (315064): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 10:25:04 (315064): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 10:25:04 (315064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 10:25:09 (315064): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 10:25:09 (315064): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 10:25:14 (315064): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000213 main     Log opened 2025-10-13T07:25:12.390980000Z
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000387 main     OS Product: Linux
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000419 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000440 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000505 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000505 main     Process ID: 1372
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.000506 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 10:25:14 (315064): Guest Log: 00:00:00.001158 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 10:25:14 (315064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 10:25:14 (315064): Guest Log: [INFO] Mounting shared directory
2025-10-13 10:25:14 (315064): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 10:25:16 (315064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 10:25:16 (315064): Guest Log: [INFO] Detected branch: prod
2025-10-13 10:25:16 (315064): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 10:25:16 (315064): Guest Log: Copying input files
2025-10-13 10:25:18 (315064): Guest Log: Copied input files into RunAtlas.
2025-10-13 10:25:18 (315064): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-10-13 10:25:27 (315064): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 10:25:27 (315064): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 10:25:27 (315064): Guest Log: 2.6.3.0 1647 0 29604 151653 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-10-13 10:25:28 (315064): Guest Log: copied the webapp to /var/www
2025-10-13 10:25:29 (315064): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-13 10:25:29 (315064): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-13 10:25:29 (315064): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 10:25:29 (315064): Guest Log:  *** Starting ATLAS job. (PandaID=6840530399 taskID=46676269) ***
2025-10-13 10:26:18 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 10:26:38 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 10:29:28 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 10:29:48 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 10:30:09 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 10:30:29 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 10:34:39 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 10:34:59 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 10:54:41 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 10:55:02 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 11:26:36 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 11:26:57 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 11:40:19 (315064): VM state change detected. (old = 'running', new = 'paused')
2025-10-13 11:40:39 (315064): VM state change detected. (old = 'paused', new = 'running')
2025-10-13 11:41:04 (315064): Guest Log:  *** Job finished ***
2025-10-13 11:41:04 (315064): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:39:57,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:39:57,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:00,605 | INFO     | [monitor] cgroup control has ended
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:02,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364492801856)>', '<ExcThread(monitor, started 140363557762816)>']
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:02,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:02,180 | INFO     | [monitor] control thread has ended
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,175 | INFO     | all workflow threads have been joined
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,175 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,175 | INFO     | traces error code: 0
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,255 [wrapper] ==== pilot stdout END ====
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,260 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,264 [wrapper] pilotpid: 6058
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,268 [wrapper] Pilot exit status: 0
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,321 [wrapper] pandaids: 6840530399
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,353 [wrapper] cleanup supervisor_pilot 31717 6059
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,360 [wrapper] Test setup, not cleaning
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,364 [wrapper] apfmon messages muted
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,369 [wrapper] ==== wrapper stdout END ====
2025-10-13 11:41:04 (315064): Guest Log: 2025-10-13 08:40:07,373 [wrapper] ==== wrapper stderr END ====
2025-10-13 11:41:04 (315064): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 11:41:04 (315064): Guest Log:     "exeErrorCode": 0,
2025-10-13 11:41:04 (315064): Guest Log:     "exeErrorDiag": "",
2025-10-13 11:41:04 (315064): Guest Log:     "pilotErrorCode": 0,
2025-10-13 11:41:04 (315064): Guest Log:     "pilotErrorDiag": "",
2025-10-13 11:41:04 (315064): Guest Log:  *** Listing of results directory ***
2025-10-13 11:41:04 (315064): Guest Log: total 202980
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 17:32 pilot3.tar.gz
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 17:48 queuedata.json
2025-10-13 11:41:04 (315064): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 17:49 runpilot2-wrapper.sh
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas      6946 Oct 13 07:25 init_data.xml
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 13 07:25 start_atlas.sh
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas    569692 Oct 13 07:25 input.tar.gz
2025-10-13 11:41:04 (315064): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 07:25 EVNT.46676267._001695.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 07:25 pandaJob.out
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas    972849 Oct 13 07:25 agis_schedconf.cvmfs.json
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 07:25 agis_ddmendpoints.agis.ALL.json
2025-10-13 11:41:04 (315064): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 07:25 pilot3
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas 202141386 Oct 13 08:38 HITS.46676269._085325.pool.root.1
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 13 08:39 memory_monitor_summary.json
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas    326498 Oct 13 08:39 log.46676269._085325.job.log.tgz.1
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas      7812 Oct 13 08:39 heartbeat.json
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 08:39 pilot_heartbeat.json
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 13 08:40 pilotlog.txt
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas    616407 Oct 13 08:40 log.46676269._085325.job.log.1
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 08:40 output.list
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 08:40 runtime_log
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas    962560 Oct 13 08:40 result.tar.gz
2025-10-13 11:41:04 (315064): Guest Log: -rw-------. 1 atlas atlas       645 Oct 13 08:40 WB5NDmENFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoaUMDmZGIVGm.diag
2025-10-13 11:41:04 (315064): Guest Log: -rw-r--r--. 1 atlas atlas      8615 Oct 13 08:40 runtime_log.err
2025-10-13 11:41:05 (315064): Guest Log: Looking for outputfile HITS.46676269._085325.pool.root.1
2025-10-13 11:41:05 (315064): Guest Log: HITS file was successfully produced
2025-10-13 11:41:05 (315064): Guest Log: -rw-------. 1 atlas atlas 202141386 Oct 13 08:38 /home/atlas/RunAtlas/HITS.46676269._085325.pool.root.1
2025-10-13 11:41:05 (315064): Guest Log: Successfully finished the ATLAS job!
2025-10-13 11:41:05 (315064): Guest Log: Copying the results back to the shared directory!
2025-10-13 11:41:05 (315064): Guest Log:  *** Contents of shared directory: ***
2025-10-13 11:41:05 (315064): Guest Log: total 214980
2025-10-13 11:41:05 (315064): Guest Log: -rw-r--r--. 1 root root 219412847 Oct 13 07:24 ATLAS.root_0
2025-10-13 11:41:05 (315064): Guest Log: -rw-r--r--. 1 root root      6946 Oct 13 07:24 init_data.xml
2025-10-13 11:41:05 (315064): Guest Log: -rw-r--r--. 1 root root    569692 Oct 13 07:24 input.tar.gz
2025-10-13 11:41:05 (315064): Guest Log: -rw-r--r--. 1 root root    962560 Oct 13  2025 result.tar.gz
2025-10-13 11:41:05 (315064): Guest Log: -rw-r--r--. 1 root root     15120 Oct 13 07:24 start_atlas.sh
2025-10-13 11:41:05 (315064): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 11:41:05 (315064): VM Completion File Detected.
2025-10-13 11:41:05 (315064): Powering off VM.
2025-10-13 11:41:05 (315064): Successfully stopped VM.
2025-10-13 11:41:05 (315064): Deregistering VM. (boinc_fcb7756e1592fbff, slot#0)
2025-10-13 11:41:05 (315064): Removing network bandwidth throttle group from VM.
2025-10-13 11:41:05 (315064): Removing VM from VirtualBox.
2025-10-13 11:41:10 (315064): called boinc_finish(0)

</stderr_txt>
]]>

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