Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:07 (2212451): wrapper (7.7.26015): starting
17:31:07 (2212451): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:31:07] Arguments: --nthreads 8
[2025-10-12 17:31:07] Threads: 8
[2025-10-12 17:31:07] Checking for CVMFS
[2025-10-12 17:31:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:31:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:31:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:31:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:31:09] 2.13.2.0 558603 129805 520436 151638 3 574 25711486 32935936 40064 16776704 0 259757742 99.628 247884257 19953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 17:31:09] CVMFS is ok
[2025-10-12 17:31:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:31:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:31:09] Further information can be found at the LHC@home message board.
[2025-10-12 17:31:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:31:09] Checking for apptainer binary...
[2025-10-12 17:31:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:31:09] Running /usr/bin/apptainer --version
[2025-10-12 17:31:09] apptainer version 1.4.3-1.el9
[2025-10-12 17:31:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:31:10] c6-6-8-3.aglt2.org
[2025-10-12 17:31:10] apptainer works
[2025-10-12 17:31:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:31:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:31:10] Starting ATLAS job with PandaID=6840182216
[2025-10-12 17:31:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:59:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:59:40] 2025-10-13 04:58:36,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:59:40] 2025-10-13 04:58:36,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:59:40] 2025-10-13 04:58:36,291 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:59:40] 2025-10-13 04:58:36,292 | INFO     | sum of square deviations: 25700148321.733967
[2025-10-13 00:59:40] 2025-10-13 04:58:36,306 | INFO     | sum of deviations: 112949628629.76581
[2025-10-13 00:59:40] 2025-10-13 04:58:36,307 | INFO     | mean x: 1760318146.2155964
[2025-10-13 00:59:40] 2025-10-13 04:58:36,307 | INFO     | mean y: 2092809.0344036696
[2025-10-13 00:59:40] 2025-10-13 04:58:36,307 | INFO     | -- intersect: -7734332615.294615
[2025-10-13 00:59:40] 2025-10-13 04:58:36,307 | INFO     | intersect: -7734332615.294615
[2025-10-13 00:59:40] 2025-10-13 04:58:36,334 | INFO     | chi2: 4.0651864524541
[2025-10-13 00:59:40] 2025-10-13 04:58:36,375 | INFO     | sum of square deviations: 24826135378.589203
[2025-10-13 00:59:40] 2025-10-13 04:58:36,432 | INFO     | sum of deviations: 163574672555.5429
[2025-10-13 00:59:40] 2025-10-13 04:58:36,432 | INFO     | mean x: 1760317993.7215776
[2025-10-13 00:59:40] 2025-10-13 04:58:36,432 | INFO     | mean y: 2101589.554524362
[2025-10-13 00:59:40] 2025-10-13 04:58:36,432 | INFO     | -- intersect: -11596298041.544252
[2025-10-13 00:59:40] 2025-10-13 04:58:36,433 | INFO     | intersect: -11596298041.544252
[2025-10-13 00:59:40] 2025-10-13 04:58:36,433 | INFO     | chi2: 2.593998164873732
[2025-10-13 00:59:40] 2025-10-13 04:58:36,433 | INFO     | current chi2=2.593998164873732 (change=36.18993383912885 %)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,434 | INFO     | sum of square deviations: 23972064520.69725
[2025-10-13 00:59:40] 2025-10-13 04:58:36,469 | INFO     | sum of deviations: 165308713446.0773
[2025-10-13 00:59:40] 2025-10-13 04:58:36,505 | INFO     | mean x: 1760317841.2183099
[2025-10-13 00:59:40] 2025-10-13 04:58:36,505 | INFO     | mean y: 2101894.2464788733
[2025-10-13 00:59:40] 2025-10-13 04:58:36,505 | INFO     | -- intersect: -12136855822.004116
[2025-10-13 00:59:40] 2025-10-13 04:58:36,505 | INFO     | intersect: -12136855822.004116
[2025-10-13 00:59:40] 2025-10-13 04:58:36,538 | INFO     | chi2: 2.5794844777720494
[2025-10-13 00:59:40] 2025-10-13 04:58:36,538 | INFO     | current chi2=2.5794844777720494 (change=0.5595103072244904 %)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,567 | INFO     | right removable region: 425
[2025-10-13 00:59:40] 2025-10-13 04:58:36,567 | INFO     | sum of square deviations: 24825971654.14404
[2025-10-13 00:59:40] 2025-10-13 04:58:36,595 | INFO     | sum of deviations: 28212743290.220486
[2025-10-13 00:59:40] 2025-10-13 04:58:36,595 | INFO     | mean x: 1760318298.723898
[2025-10-13 00:59:40] 2025-10-13 04:58:36,595 | INFO     | mean y: 2107555.464037123
[2025-10-13 00:59:40] 2025-10-13 04:58:36,595 | INFO     | -- intersect: -1998354257.7872882
[2025-10-13 00:59:40] 2025-10-13 04:58:36,595 | INFO     | intersect: -1998354257.7872882
[2025-10-13 00:59:40] 2025-10-13 04:58:36,596 | INFO     | chi2: 1.9165288025910847
[2025-10-13 00:59:40] 2025-10-13 04:58:36,596 | INFO     | current chi2=1.9165288025910847 (change=52.85508241733656 %)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,597 | INFO     | sum of square deviations: 23971867921.45536
[2025-10-13 00:59:40] 2025-10-13 04:58:36,635 | INFO     | sum of deviations: 7376740336.1455345
[2025-10-13 00:59:40] 2025-10-13 04:58:36,635 | INFO     | mean x: 1760318451.230047
[2025-10-13 00:59:40] 2025-10-13 04:58:36,635 | INFO     | mean y: 2111262.723004695
[2025-10-13 00:59:40] 2025-10-13 04:58:36,635 | INFO     | -- intersect: -539582532.9460299
[2025-10-13 00:59:40] 2025-10-13 04:58:36,635 | INFO     | intersect: -539582532.9460299
[2025-10-13 00:59:40] 2025-10-13 04:58:36,636 | INFO     | chi2: 1.7776047446462422
[2025-10-13 00:59:40] 2025-10-13 04:58:36,636 | INFO     | current chi2=1.7776047446462422 (change=7.2487331135864865 %)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,636 | INFO     | left removable region: 20
[2025-10-13 00:59:40] 2025-10-13 04:58:36,637 | INFO     | sum of square deviations: 20598504987.29371
[2025-10-13 00:59:40] 2025-10-13 04:58:36,656 | INFO     | sum of deviations: 46094717707.47899
[2025-10-13 00:59:40] 2025-10-13 04:58:36,656 | INFO     | mean x: 1760318420.7432098
[2025-10-13 00:59:40] 2025-10-13 04:58:36,656 | INFO     | mean y: 2123730.4469135804
[2025-10-13 00:59:40] 2025-10-13 04:58:36,656 | INFO     | -- intersect: -3937064124.6661615
[2025-10-13 00:59:40] 2025-10-13 04:58:36,656 | INFO     | intersect: -3937064124.6661615
[2025-10-13 00:59:40] 2025-10-13 04:58:36,657 | INFO     | chi2: 0.2206322910725013
[2025-10-13 00:59:40] 2025-10-13 04:58:36,657 | INFO     | -- intersect: -3937064124.6661615
[2025-10-13 00:59:40] 2025-10-13 04:58:36,657 | INFO     | current memory leak: 2.24 B/s (using 405 data points, chi2=0.22)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | could have reported an average CPU frequency of 2634 MHz (18 samples)
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | ..............................
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . Timing measurements:
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . get job = 0 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . initial setup = 7 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . payload setup = 36 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . stage-in = 0 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . payload execution = 26607 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . stage-out = 5 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | . log creation = 0 s
[2025-10-13 00:59:40] 2025-10-13 04:58:36,672 | INFO     | ..............................
[2025-10-13 00:59:40] 2025-10-13 04:58:36,740 | INFO     | time since job start (26771s) is within the limit (172800.0s)
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | 
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | job summary report
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | --------------------------------------------------
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | PanDA job id: 6840182216
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | task id: 46676269
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | errors: (none)
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:59:40] 2025-10-13 04:58:37,285 | INFO     | pilot state: finished 
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | transexitcode: 0
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | exeerrorcode: 0
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | exeerrordiag: 
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | exitcode: 0
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | exitmsg: OK
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | cpuconsumptiontime: 47108 s
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | nevents: 400
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | neventsw: 0
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | pid: 2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | pgrp: 2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | corecount: 8
[2025-10-13 00:59:40] 2025-10-13 04:58:37,286 | INFO     | event service: False
[2025-10-13 00:59:40] 2025-10-13 04:58:37,287 | INFO     | sizes: {0: 2348579, 1: 2348635, 2: 2348663, 3: 2348890, 4: 2348890, 15: 2348918, 27: 2349074, 34: 2349364, 38: 2349392, 26648: 2385609, 26649: 2385608, 26655: 2394
[2025-10-13 00:59:40] 2025-10-13 04:58:37,287 | INFO     | --------------------------------------------------
[2025-10-13 00:59:40] 2025-10-13 04:58:37,287 | INFO     | 
[2025-10-13 00:59:40] 2025-10-13 04:58:37,287 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 00:59:40] 2025-10-13 04:58:37,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:59:40] 2025-10-13 04:58:37,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:59:40] 2025-10-13 04:58:37,421 | INFO     | job 6840182216 has completed (purged errors)
[2025-10-13 00:59:40] 2025-10-13 04:58:37,421 | INFO     | overall cleanup function is called
[2025-10-13 00:59:40] 2025-10-13 04:58:38,443 | INFO     | --- collectZombieJob: --- 10, [2234814]
[2025-10-13 00:59:40] 2025-10-13 04:58:38,443 | INFO     | zombie collector waiting for pid 2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:38,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:59:40] 2025-10-13 04:58:38,443 | INFO     | collected zombie processes
[2025-10-13 00:59:40] 2025-10-13 04:58:38,443 | INFO     | will attempt to kill all subprocesses of pid=2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:40,387 | INFO     | process IDs to be killed: [2234814] (in reverse order)
[2025-10-13 00:59:40] 2025-10-13 04:58:40,753 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:59:40] 2025-10-13 04:58:40,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:59:40] 2025-10-13 04:58:40,796 | INFO     | did not find any defunct processes belonging to 2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:40,836 | INFO     | did not find any defunct processes belonging to 2234814
[2025-10-13 00:59:40] 2025-10-13 04:58:40,837 | INFO     | ready for new job
[2025-10-13 00:59:40] 2025-10-13 04:58:40,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:59:40] 2025-10-13 04:58:40,843 | INFO     | ***************************************
[2025-10-13 00:59:40] 2025-10-13 04:58:40,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:59:40] 2025-10-13 04:58:40,843 | INFO     | ***************************************
[2025-10-13 00:59:40] 2025-10-13 04:58:40,843 | INFO     | 
[2025-10-13 00:59:40] 2025-10-13 04:58:40,856 | INFO     | architecture information:
[2025-10-13 00:59:40] 2025-10-13 04:58:40,857 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:59:40] 2025-10-13 04:58:40,906 | INFO     | cat /etc/os-release:
[2025-10-13 00:59:40] NAME="CentOS Linux"
[2025-10-13 00:59:40] VERSION="7 (Core)"
[2025-10-13 00:59:40] ID="centos"
[2025-10-13 00:59:40] ID_LIKE="rhel fedora"
[2025-10-13 00:59:40] VERSION_ID="7"
[2025-10-13 00:59:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:59:40] ANSI_COLOR="0;31"
[2025-10-13 00:59:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:59:40] HOME_URL="https://www.centos.org/"
[2025-10-13 00:59:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:59:40] 
[2025-10-13 00:59:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:59:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:59:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:59:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:59:40] 
[2025-10-13 00:59:40] 2025-10-13 04:58:40,906 | INFO     | ***************************************
[2025-10-13 00:59:40] 2025-10-13 04:58:41,417 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 00:59:40] 2025-10-13 04:58:41,477 | INFO     | sufficient remaining disk space (92757032960 B)
[2025-10-13 00:59:40] 2025-10-13 04:58:41,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:59:40] 2025-10-13 04:58:41,478 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:59:40] 2025-10-13 04:58:41,478 | INFO     | update_server=False
[2025-10-13 00:59:40] 2025-10-13 04:58:41,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:59:40] 2025-10-13 04:58:41,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:59:40] 2025-10-13 04:58:41,657 | INFO     | all job control threads have been joined
[2025-10-13 00:59:40] 2025-10-13 04:58:41,838 | INFO     | all data control threads have been joined
[2025-10-13 00:59:40] 2025-10-13 04:58:41,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:59:40] 2025-10-13 04:58:41,862 | INFO     | aborting loop
[2025-10-13 00:59:40] 2025-10-13 04:58:42,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:59:40] 2025-10-13 04:58:42,466 | INFO     | all payload control threads have been joined
[2025-10-13 00:59:40] 2025-10-13 04:58:42,484 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:42,553 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:42,663 | INFO     | [job] control thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:42,829 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:42,844 | INFO     | [data] control thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:42,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:59:40] 2025-10-13 04:58:42,868 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,007 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,013 | INFO     | [job] validate thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,138 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,163 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,472 | INFO     | [payload] control thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,485 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,869 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:43,887 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:58:46,902 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:59:40] 2025-10-13 04:59:11,220 | INFO     | PID=2219498 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:59:40] 2025-10-13 04:59:11,221 | INFO     | .. there are 53 such processes running
[2025-10-13 00:59:40] 2025-10-13 04:59:11,221 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:59:40] 2025-10-13 04:59:11,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:59:40] 2025-10-13 04:59:11,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:59:40] 2025-10-13 04:59:12,558 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:59:40] 2025-10-13 04:59:14,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745373992768)>', '<ExcThread(monitor, started 139745101321984)>']
[2025-10-13 00:59:40] 2025-10-13 04:59:14,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:59:40] 2025-10-13 04:59:14,254 | INFO     | [monitor] control thread has ended
[2025-10-13 00:59:40] 2025-10-13 04:59:19,078 | INFO     | all workflow threads have been joined
[2025-10-13 00:59:40] 2025-10-13 04:59:19,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:59:40] 2025-10-13 04:59:19,078 | INFO     | traces error code: 0
[2025-10-13 00:59:40] 2025-10-13 04:59:19,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:59:40] 2025-10-13 04:59:19,502 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:59:40] 2025-10-13 04:59:19,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:59:40] 2025-10-13 04:59:19,757 [wrapper] pilotpid: 2219498
[2025-10-13 00:59:40] 2025-10-13 04:59:19,807 [wrapper] Pilot exit status: 0
[2025-10-13 00:59:40] 2025-10-13 04:59:19,942 [wrapper] pandaids: 6840182216
[2025-10-13 00:59:40] 2025-10-13 04:59:20,163 [wrapper] cleanup supervisor_pilot 3892667 2219500
[2025-10-13 00:59:40] 2025-10-13 04:59:20,197 [wrapper] Test setup, not cleaning
[2025-10-13 00:59:40] 2025-10-13 04:59:20,217 [wrapper] apfmon messages muted
[2025-10-13 00:59:40] 2025-10-13 04:59:20,259 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:59:40] 2025-10-13 04:59:20,279 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:59:40]  *** Error codes and diagnostics ***
[2025-10-13 00:59:40]     "exeErrorCode": 0,
[2025-10-13 00:59:40]     "exeErrorDiag": "",
[2025-10-13 00:59:40]     "pilotErrorCode": 0,
[2025-10-13 00:59:40]     "pilotErrorDiag": "",
[2025-10-13 00:59:40]  *** Listing of results directory ***
[2025-10-13 00:59:40] total 414296
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:36 queuedata.json
[2025-10-13 00:59:40] -rwx------. 1 boincer umatlas     36292 Oct 12 10:36 runpilot2-wrapper.sh
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:59:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:31 run_atlas
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:31 job.xml
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas 219547983 Oct 12 17:31 EVNT.46676267._004354.pool.root.1
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 17:31 input.tar.gz
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:31 start_atlas.sh
[2025-10-13 00:59:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:31 shared
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:31 boinc_lockfile
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 17:31 pandaJob.out
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas    975528 Oct 12 17:32 agis_schedconf.cvmfs.json
[2025-10-13 00:59:40] drwx------. 5 boincer umatlas      4096 Oct 12 17:32 pilot3
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas 193002390 Oct 13 00:54 HITS.46676269._081066.pool.root.1
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas       531 Oct 13 00:55 boinc_task_state.xml
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas      6859 Oct 13 00:56 init_data.xml
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas      1045 Oct 13 00:57 memory_monitor_summary.json
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas    607040 Oct 13 00:57 log.46676269._081066.job.log.tgz.1
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas        95 Oct 13 00:58 pilot_heartbeat.json
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas      7830 Oct 13 00:58 heartbeat.json
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas      4824 Oct 13 00:59 pilotlog.txt
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas   3282551 Oct 13 00:59 log.46676269._081066.job.log.1
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas       357 Oct 13 00:59 output.list
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas       620 Oct 13 00:59 runtime_log
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas   3911680 Oct 13 00:59 result.tar.gz
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 00:59 runtime_log.err
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas       657 Oct 13 00:59 IoPMDmiMCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNGkNDm66VNNm.diag
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas        28 Oct 13 00:59 wrapper_checkpoint.txt
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:59 boinc_mmap_file
[2025-10-13 00:59:40] -rw-r--r--. 1 boincer umatlas     21056 Oct 13 00:59 stderr.txt
[2025-10-13 00:59:40] HITS file was successfully produced:
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas 193002390 Oct 13 00:54 shared/HITS.pool.root.1
[2025-10-13 00:59:40]  *** Contents of shared directory: ***
[2025-10-13 00:59:40] total 407288
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas 219547983 Oct 12 17:31 ATLAS.root_0
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 17:31 input.tar.gz
[2025-10-13 00:59:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:31 start_atlas.sh
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas 193002390 Oct 13 00:54 HITS.pool.root.1
[2025-10-13 00:59:40] -rw-------. 1 boincer umatlas   3911680 Oct 13 00:59 result.tar.gz
00:59:41 (2212451): run_atlas exited; CPU time 48603.000207
00:59:41 (2212451): called boinc_finish(0)

</stderr_txt>
]]>

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