Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:09:13 (1514): wrapper (7.7.26015): starting
17:09:13 (1514): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:09:13] Arguments: --nthreads 12
[2025-10-12 17:09:13] Threads: 12
[2025-10-12 17:09:13] Checking for CVMFS
[2025-10-12 17:09:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:09:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:09:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:09:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:09:13] 2.11.2.0 2984 223356 95660 151636 0 59 14914873 20275200 1 130560 1 110341562 99.984 13384899 12633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:09:13] CVMFS is ok
[2025-10-12 17:09:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:09:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:09:13] Further information can be found at the LHC@home message board.
[2025-10-12 17:09:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:09:13] Checking for apptainer binary...
[2025-10-12 17:09:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:09:13] Running /usr/bin/apptainer --version
[2025-10-12 17:09:13] apptainer version 1.3.2-1.el7
[2025-10-12 17:09:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:09:15] c-205-26.aglt2.org
[2025-10-12 17:09:15] apptainer works
[2025-10-12 17:09:15] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:09:15] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:09:15] Starting ATLAS job with PandaID=6840429863
[2025-10-12 17:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:28:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:28:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 18:28:43]  replicas=None
[2025-10-12 18:28:43]  scope=mc23_13p6TeV
[2025-10-12 18:28:43]  status=None
[2025-10-12 18:28:43]  status_code=0
[2025-10-12 18:28:43]  storage_token=
[2025-10-12 18:28:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840429863/log.46676269._084976.job.log.tgz.1
[2025-10-12 18:28:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/7d/log.46676269._084976.job.log.tgz.1
[2025-10-12 18:28:43]  workdir=None
[2025-10-12 18:28:43] ]
[2025-10-12 18:28:43] 2025-10-12 22:27:36,795 | INFO     | transferring file log.46676269._084976.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840429863/log.46676269._084976.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:28:43] 2025-10-12 22:27:36,795 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840429863/log.46676269._084976.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._084976.job
[2025-10-12 18:28:43] 2025-10-12 22:27:36,818 | INFO     | adding to output.list: log.46676269._084976.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/7d/log.46676269._084976.job.log.tg
[2025-10-12 18:28:43] 2025-10-12 22:27:36,819 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:28:43] 2025-10-12 22:27:36,819 | INFO     | summary of transferred files:
[2025-10-12 18:28:43] 2025-10-12 22:27:36,819 | INFO     |  -- lfn=log.46676269._084976.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:28:43] 2025-10-12 22:27:36,820 | INFO     | stage-out finished correctly
[2025-10-12 18:28:43] 2025-10-12 22:27:37,134 | INFO     | time since job start (4687s) is within the limit (172800.0s)
[2025-10-12 18:28:43] 2025-10-12 22:27:37,469 | INFO     | monitor loop #351: job 0:6840429863 is in state 'finished'
[2025-10-12 18:28:43] 2025-10-12 22:27:37,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:43] 2025-10-12 22:27:37,846 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:28:43] 2025-10-12 22:27:37,926 | INFO     | job 6840429863 has state=finished
[2025-10-12 18:28:43] 2025-10-12 22:27:37,926 | INFO     | preparing for final server update for job 6840429863 in state='finished'
[2025-10-12 18:28:43] 2025-10-12 22:27:37,927 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:28:43] 2025-10-12 22:27:37,927 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:28:43] 2025-10-12 22:27:37,927 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:28:43] 2025-10-12 22:27:37,927 | INFO     | job 6840429863 has finished - writing final server update
[2025-10-12 18:28:43] 2025-10-12 22:27:37,928 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:28:43] 2025-10-12 22:27:37,929 | INFO     | executing command: lscpu
[2025-10-12 18:28:43] 2025-10-12 22:27:37,957 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:28:43] 2025-10-12 22:27:39,140 | INFO     | time since job start (4689s) is within the limit (172800.0s)
[2025-10-12 18:28:43] 2025-10-12 22:27:39,973 | INFO     | monitor loop #352: job 0:6840429863 is in state 'finished'
[2025-10-12 18:28:43] 2025-10-12 22:27:39,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:43] 2025-10-12 22:27:41,146 | INFO     | time since job start (4691s) is within the limit (172800.0s)
[2025-10-12 18:28:43] 2025-10-12 22:27:42,476 | INFO     | monitor loop #353: job 0:6840429863 is in state 'finished'
[2025-10-12 18:28:43] 2025-10-12 22:27:42,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:43] 2025-10-12 22:27:42,835 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:28:43] 2025-10-12 22:27:42,838 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-12 18:28:43] 2025-10-12 22:27:42,841 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840429863/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:28:43] 2025-10-12 22:27:42,842 | INFO     | extracted standard info from prmon json
[2025-10-12 18:28:43] 2025-10-12 22:27:42,842 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:28:43] 2025-10-12 22:27:42,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:28:43] 2025-10-12 22:27:42,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:28:43] 2025-10-12 22:27:42,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | sum of square deviations: 106336877.5
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | sum of deviations: 1121016520.0
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | mean x: 1760305808.5
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | mean y: 2696563.057142857
[2025-10-12 18:28:43] 2025-10-12 22:27:42,846 | INFO     | -- intersect: -18554665078.30247
[2025-10-12 18:28:43] 2025-10-12 22:27:42,847 | INFO     | intersect: -18554665078.30247
[2025-10-12 18:28:43] 2025-10-12 22:27:42,847 | INFO     | chi2: 0.05528494621191546
[2025-10-12 18:28:43] 2025-10-12 22:27:42,847 | INFO     | -- intersect: -18554665078.30247
[2025-10-12 18:28:43] 2025-10-12 22:27:42,847 | INFO     | current memory leak: 10.54 B/s (using 70 data points, chi2=0.06)
[2025-10-12 18:28:43] 2025-10-12 22:27:42,847 | INFO     | could have reported an average CPU frequency of 2026 MHz (6 samples)
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | ..............................
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . Timing measurements:
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . get job = 0 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . initial setup = 2 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . payload setup = 7 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . stage-in = 0 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . payload execution = 4658 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . stage-out = 0 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,848 | INFO     | . log creation = 0 s
[2025-10-12 18:28:43] 2025-10-12 22:27:42,849 | INFO     | ..............................
[2025-10-12 18:28:43] 2025-10-12 22:27:43,151 | INFO     | time since job start (4693s) is within the limit (172800.0s)
[2025-10-12 18:28:43] 2025-10-12 22:27:43,298 | INFO     | 
[2025-10-12 18:28:43] 2025-10-12 22:27:43,298 | INFO     | job summary report
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | --------------------------------------------------
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | PanDA job id: 6840429863
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | task id: 46676269
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | errors: (none)
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:28:43] 2025-10-12 22:27:43,305 | INFO     | pilot state: finished 
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | transexitcode: 0
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | exeerrorcode: 0
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | exeerrordiag: 
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | exitcode: 0
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | exitmsg: OK
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | cpuconsumptiontime: 47694 s
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | nevents: 400
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | neventsw: 0
[2025-10-12 18:28:43] 2025-10-12 22:27:43,306 | INFO     | pid: 11717
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | pgrp: 11717
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | corecount: 12
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | event service: False
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4668: 2375365, 4669: 2375364, 4670: 2384418, 4671: 2384602, 4676: 2384796}
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | --------------------------------------------------
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | 
[2025-10-12 18:28:43] 2025-10-12 22:27:43,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:28:43] 2025-10-12 22:27:43,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:28:43] 2025-10-12 22:27:43,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:28:43] 2025-10-12 22:27:43,336 | INFO     | job 6840429863 has completed (purged errors)
[2025-10-12 18:28:43] 2025-10-12 22:27:43,336 | INFO     | overall cleanup function is called
[2025-10-12 18:28:43] 2025-10-12 22:27:44,344 | INFO     | --- collectZombieJob: --- 10, [11717]
[2025-10-12 18:28:43] 2025-10-12 22:27:44,344 | INFO     | zombie collector waiting for pid 11717
[2025-10-12 18:28:43] 2025-10-12 22:27:44,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:28:43] 2025-10-12 22:27:44,344 | INFO     | collected zombie processes
[2025-10-12 18:28:43] 2025-10-12 22:27:44,345 | INFO     | will attempt to kill all subprocesses of pid=11717
[2025-10-12 18:28:43] 2025-10-12 22:27:44,435 | INFO     | process IDs to be killed: [11717] (in reverse order)
[2025-10-12 18:28:43] 2025-10-12 22:27:44,490 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:28:43] 2025-10-12 22:27:44,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:28:43] 2025-10-12 22:27:44,493 | INFO     | did not find any defunct processes belonging to 11717
[2025-10-12 18:28:43] 2025-10-12 22:27:44,496 | INFO     | did not find any defunct processes belonging to 11717
[2025-10-12 18:28:43] 2025-10-12 22:27:44,496 | INFO     | ready for new job
[2025-10-12 18:28:43] 2025-10-12 22:27:44,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:28:43] 2025-10-12 22:27:44,497 | INFO     | ***************************************
[2025-10-12 18:28:43] 2025-10-12 22:27:44,497 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:28:43] 2025-10-12 22:27:44,498 | INFO     | ***************************************
[2025-10-12 18:28:43] 2025-10-12 22:27:44,498 | INFO     | 
[2025-10-12 18:28:43] 2025-10-12 22:27:44,498 | INFO     | architecture information:
[2025-10-12 18:28:43] 2025-10-12 22:27:44,499 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:28:43] 2025-10-12 22:27:44,515 | INFO     | cat /etc/os-release:
[2025-10-12 18:28:43] NAME="CentOS Linux"
[2025-10-12 18:28:43] VERSION="7 (Core)"
[2025-10-12 18:28:43] ID="centos"
[2025-10-12 18:28:43] ID_LIKE="rhel fedora"
[2025-10-12 18:28:43] VERSION_ID="7"
[2025-10-12 18:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:28:43] ANSI_COLOR="0;31"
[2025-10-12 18:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:28:43] HOME_URL="https://www.centos.org/"
[2025-10-12 18:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:28:43] 
[2025-10-12 18:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:28:43] 
[2025-10-12 18:28:43] 2025-10-12 22:27:44,515 | INFO     | ***************************************
[2025-10-12 18:28:43] 2025-10-12 22:27:45,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:28:43] 2025-10-12 22:27:45,034 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-12 18:28:43] 2025-10-12 22:27:45,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:28:43] 2025-10-12 22:27:45,034 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:28:43] 2025-10-12 22:27:45,034 | INFO     | update_server=False
[2025-10-12 18:28:43] 2025-10-12 22:27:45,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:28:43] 2025-10-12 22:27:45,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:28:43] 2025-10-12 22:27:45,035 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 18:28:43] 2025-10-12 22:27:45,036 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:28:43] 2025-10-12 22:27:45,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:28:43] 2025-10-12 22:27:45,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:28:43] 2025-10-12 22:27:45,073 | INFO     | all job control threads have been joined
[2025-10-12 18:28:43] 2025-10-12 22:27:45,559 | INFO     | all payload control threads have been joined
[2025-10-12 18:28:43] 2025-10-12 22:27:45,726 | INFO     | all data control threads have been joined
[2025-10-12 18:28:43] 2025-10-12 22:27:45,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:43] 2025-10-12 22:27:45,984 | INFO     | aborting loop
[2025-10-12 18:28:43] 2025-10-12 22:27:46,040 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,078 | INFO     | [job] control thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,452 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,564 | INFO     | [payload] control thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,732 | INFO     | [data] control thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,866 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,921 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:46,990 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,041 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,074 | INFO     | [job] validate thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,450 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,452 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,637 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:47,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:43] 2025-10-12 22:27:48,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:28:43] 2025-10-12 22:27:48,945 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:27:52,441 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:28:43] 2025-10-12 22:28:37,262 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:28:43] 2025-10-12 22:28:38,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868582307648)>', '<ExcThread(monitor, started 139867480647424)>']
[2025-10-12 18:28:43] 2025-10-12 22:28:38,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:28:43] 2025-10-12 22:28:38,303 | INFO     | [monitor] control thread has ended
[2025-10-12 18:28:43] 2025-10-12 22:28:43,269 | INFO     | all workflow threads have been joined
[2025-10-12 18:28:43] 2025-10-12 22:28:43,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:28:43] 2025-10-12 22:28:43,270 | INFO     | traces error code: 0
[2025-10-12 18:28:43] 2025-10-12 22:28:43,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:28:43] 2025-10-12 22:28:43,354 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:28:43] 2025-10-12 22:28:43,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:28:43] 2025-10-12 22:28:43,362 [wrapper] pilotpid: 5326
[2025-10-12 18:28:43] 2025-10-12 22:28:43,366 [wrapper] Pilot exit status: 0
[2025-10-12 18:28:43] 2025-10-12 22:28:43,380 [wrapper] pandaids: 6840429863
[2025-10-12 18:28:43] 2025-10-12 22:28:43,428 [wrapper] cleanup supervisor_pilot 29488 5327
[2025-10-12 18:28:43] 2025-10-12 22:28:43,432 [wrapper] Test setup, not cleaning
[2025-10-12 18:28:43] 2025-10-12 22:28:43,436 [wrapper] apfmon messages muted
[2025-10-12 18:28:43] 2025-10-12 22:28:43,440 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:28:43] 2025-10-12 22:28:43,443 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:28:43]  *** Error codes and diagnostics ***
[2025-10-12 18:28:43]     "exeErrorCode": 0,
[2025-10-12 18:28:43]     "exeErrorDiag": "",
[2025-10-12 18:28:43]     "pilotErrorCode": 0,
[2025-10-12 18:28:43]     "pilotErrorDiag": "",
[2025-10-12 18:28:43]  *** Listing of results directory ***
[2025-10-12 18:28:43] total 409340
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:32 queuedata.json
[2025-10-12 18:28:43] -rwx------ 1 boincer umatlas     36292 Oct 12 13:32 runpilot2-wrapper.sh
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:28:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:09 run_atlas
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:09 job.xml
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas 219922827 Oct 12 17:09 EVNT.46676267._002232.pool.root.1
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:09 start_atlas.sh
[2025-10-12 18:28:43] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:09 shared
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:09 input.tar.gz
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:09 boinc_lockfile
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:09 pandaJob.out
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas    975536 Oct 12 17:09 agis_schedconf.cvmfs.json
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas   1560580 Oct 12 17:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:28:43] drwx------ 5 boincer umatlas      4096 Oct 12 17:09 pilot3
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 18:18 init_data.xml
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas 193223834 Oct 12 18:27 HITS.46676269._084976.pool.root.1
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:27 boinc_task_state.xml
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas        95 Oct 12 18:27 pilot_heartbeat.json
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas      1050 Oct 12 18:27 memory_monitor_summary.json
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas    376694 Oct 12 18:27 log.46676269._084976.job.log.tgz.1
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas      7854 Oct 12 18:27 heartbeat.json
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:28 boinc_mmap_file
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:28 wrapper_checkpoint.txt
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas      4552 Oct 12 18:28 pilotlog.txt
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas    680108 Oct 12 18:28 log.46676269._084976.job.log.1
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas       357 Oct 12 18:28 output.list
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:28 runtime_log
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas   1075200 Oct 12 18:28 result.tar.gz
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 18:28 runtime_log.err
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas       659 Oct 12 18:28 eswKDmR7ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlXUMDmdryg6m.diag
[2025-10-12 18:28:43] -rw-r--r-- 1 boincer umatlas     21805 Oct 12 18:28 stderr.txt
[2025-10-12 18:28:43] HITS file was successfully produced:
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas 193223834 Oct 12 18:27 shared/HITS.pool.root.1
[2025-10-12 18:28:43]  *** Contents of shared directory: ***
[2025-10-12 18:28:43] total 405100
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas 219922827 Oct 12 17:09 ATLAS.root_0
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:09 start_atlas.sh
[2025-10-12 18:28:43] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 17:09 input.tar.gz
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas 193223834 Oct 12 18:27 HITS.pool.root.1
[2025-10-12 18:28:43] -rw------- 1 boincer umatlas   1075200 Oct 12 18:28 result.tar.gz
18:28:44 (1514): run_atlas exited; CPU time 47672.366303
18:28:44 (1514): called boinc_finish(0)

</stderr_txt>
]]>

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