Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:23:28 (1308261): wrapper (7.7.26015): starting
17:23:28 (1308261): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 17:23:28] Arguments: --nthreads 9
[2025-10-12 17:23:28] Threads: 9
[2025-10-12 17:23:28] Checking for CVMFS
[2025-10-12 17:23:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:23:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:23:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:23:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:23:29] 2.13.2.0 11275 64946 289016 151638 1 61 24373270 32935936 8244 16776704 10 132464954 99.632 123815544 8570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 17:23:29] CVMFS is ok
[2025-10-12 17:23:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:23:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:23:29] Further information can be found at the LHC@home message board.
[2025-10-12 17:23:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:23:29] Checking for apptainer binary...
[2025-10-12 17:23:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:23:29] Running /usr/bin/apptainer --version
[2025-10-12 17:23:29] apptainer version 1.4.3-1.el9
[2025-10-12 17:23:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:23:30] c6-12-25-1.aglt2.org
[2025-10-12 17:23:30] apptainer works
[2025-10-12 17:23:30] Set ATHENA_PROC_NUMBER=9
[2025-10-12 17:23:30] Set ATHENA_CORE_NUMBER=9
[2025-10-12 17:23:30] Starting ATLAS job with PandaID=6840182633
[2025-10-12 17:23:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:47:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:47:17] 2025-10-13 00:46:31,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:47:17] 2025-10-13 00:46:31,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:47:17] 2025-10-13 00:46:31,433 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:47:17] 2025-10-13 00:46:31,435 | INFO     | sum of square deviations: 2443580700.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,438 | INFO     | sum of deviations: 7834120932.00001
[2025-10-12 20:47:17] 2025-10-13 00:46:31,439 | INFO     | mean x: 1760310314.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,439 | INFO     | mean y: 2169043.8090452263
[2025-10-12 20:47:17] 2025-10-13 00:46:31,439 | INFO     | -- intersect: -5641386692.95173
[2025-10-12 20:47:17] 2025-10-13 00:46:31,439 | INFO     | intersect: -5641386692.95173
[2025-10-12 20:47:17] 2025-10-13 00:46:31,440 | INFO     | chi2: 3.306857429361882
[2025-10-12 20:47:17] 2025-10-13 00:46:31,441 | INFO     | sum of square deviations: 2263977332.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,444 | INFO     | sum of deviations: 25090025350.999985
[2025-10-12 20:47:17] 2025-10-13 00:46:31,445 | INFO     | mean x: 1760310161.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,445 | INFO     | mean y: 2183489.2989690723
[2025-10-12 20:47:17] 2025-10-13 00:46:31,445 | INFO     | -- intersect: -19506062438.62614
[2025-10-12 20:47:17] 2025-10-13 00:46:31,445 | INFO     | intersect: -19506062438.62614
[2025-10-12 20:47:17] 2025-10-13 00:46:31,446 | INFO     | chi2: 2.454225963170696
[2025-10-12 20:47:17] 2025-10-13 00:46:31,446 | INFO     | current chi2=2.454225963170696 (change=25.783738319668547 %)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,447 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,450 | INFO     | sum of deviations: 27600607291.999992
[2025-10-12 20:47:17] 2025-10-13 00:46:31,450 | INFO     | mean x: 1760310009.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,451 | INFO     | mean y: 2185762.978835979
[2025-10-12 20:47:17] 2025-10-13 00:46:31,451 | INFO     | -- intersect: -23206797635.336174
[2025-10-12 20:47:17] 2025-10-13 00:46:31,451 | INFO     | intersect: -23206797635.336174
[2025-10-12 20:47:17] 2025-10-13 00:46:31,452 | INFO     | chi2: 2.431383896892536
[2025-10-12 20:47:17] 2025-10-13 00:46:31,452 | INFO     | current chi2=2.431383896892536 (change=0.9307238461714289 %)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,453 | INFO     | right removable region: 188
[2025-10-12 20:47:17] 2025-10-13 00:46:31,453 | INFO     | sum of square deviations: 2263977332.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,457 | INFO     | sum of deviations: -27347750549.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,457 | INFO     | mean x: 1760310466.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,457 | INFO     | mean y: 2198731.706185567
[2025-10-12 20:47:17] 2025-10-13 00:46:31,457 | INFO     | -- intersect: 21265897284.00429
[2025-10-12 20:47:17] 2025-10-13 00:46:31,458 | INFO     | intersect: 21265897284.00429
[2025-10-12 20:47:17] 2025-10-13 00:46:31,459 | INFO     | chi2: 1.4252947868555244
[2025-10-12 20:47:17] 2025-10-13 00:46:31,459 | INFO     | current chi2=1.4252947868555244 (change=56.89881353214067 %)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,460 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,463 | INFO     | sum of deviations: -40827274624.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,463 | INFO     | mean x: 1760310619.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,463 | INFO     | mean y: 2210717.894179894
[2025-10-12 20:47:17] 2025-10-13 00:46:31,463 | INFO     | -- intersect: 34333334568.897182
[2025-10-12 20:47:17] 2025-10-13 00:46:31,465 | INFO     | intersect: 34333334568.897182
[2025-10-12 20:47:17] 2025-10-13 00:46:31,465 | INFO     | chi2: 1.1117900483980212
[2025-10-12 20:47:17] 2025-10-13 00:46:31,466 | INFO     | current chi2=1.1117900483980212 (change=21.995782300527118 %)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,466 | INFO     | left removable region: 20
[2025-10-12 20:47:17] 2025-10-13 00:46:31,467 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,469 | INFO     | sum of deviations: -17348799550.000004
[2025-10-12 20:47:17] 2025-10-13 00:46:31,469 | INFO     | mean x: 1760310588.5
[2025-10-12 20:47:17] 2025-10-13 00:46:31,470 | INFO     | mean y: 2228752.738095238
[2025-10-12 20:47:17] 2025-10-13 00:46:31,470 | INFO     | -- intersect: 20773728230.000805
[2025-10-12 20:47:17] 2025-10-13 00:46:31,470 | INFO     | intersect: 20773728230.000805
[2025-10-12 20:47:17] 2025-10-13 00:46:31,471 | INFO     | chi2: 0.14408291501161385
[2025-10-12 20:47:17] 2025-10-13 00:46:31,471 | INFO     | -- intersect: 20773728230.000805
[2025-10-12 20:47:17] 2025-10-13 00:46:31,472 | INFO     | current memory leak: -11.80 B/s (using 168 data points, chi2=0.14)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,473 | INFO     | could have reported an average CPU frequency of 1468 MHz (10 samples)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,473 | INFO     | ..............................
[2025-10-12 20:47:17] 2025-10-13 00:46:31,473 | INFO     | . Timing measurements:
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . get job = 0 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . initial setup = 4 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . payload setup = 12 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . stage-in = 0 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . payload execution = 12106 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,474 | INFO     | . stage-out = 3 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,475 | INFO     | . log creation = 0 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,475 | INFO     | ..............................
[2025-10-12 20:47:17] 2025-10-13 00:46:31,671 | INFO     | time since job start (12159s) is within the limit (172800.0s)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,723 | INFO     | 
[2025-10-12 20:47:17] 2025-10-13 00:46:31,724 | INFO     | job summary report
[2025-10-12 20:47:17] 2025-10-13 00:46:31,724 | INFO     | --------------------------------------------------
[2025-10-12 20:47:17] 2025-10-13 00:46:31,724 | INFO     | PanDA job id: 6840182633
[2025-10-12 20:47:17] 2025-10-13 00:46:31,725 | INFO     | task id: 46676269
[2025-10-12 20:47:17] 2025-10-13 00:46:31,725 | INFO     | errors: (none)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:47:17] 2025-10-13 00:46:31,725 | INFO     | pilot state: finished 
[2025-10-12 20:47:17] 2025-10-13 00:46:31,725 | INFO     | transexitcode: 0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | exeerrorcode: 0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | exeerrordiag: 
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | exitcode: 0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | exitmsg: OK
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | cpuconsumptiontime: 98468 s
[2025-10-12 20:47:17] 2025-10-13 00:46:31,726 | INFO     | nevents: 400
[2025-10-12 20:47:17] 2025-10-13 00:46:31,727 | INFO     | neventsw: 0
[2025-10-12 20:47:17] 2025-10-13 00:46:31,727 | INFO     | pid: 1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:31,727 | INFO     | pgrp: 1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:31,727 | INFO     | corecount: 9
[2025-10-12 20:47:17] 2025-10-13 00:46:31,728 | INFO     | event service: False
[2025-10-12 20:47:17] 2025-10-13 00:46:31,728 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348885, 11: 2349175, 12: 2349203, 12123: 2379401, 12127: 2388399, 12129: 2388455, 12138: 2388649}
[2025-10-12 20:47:17] 2025-10-13 00:46:31,728 | INFO     | --------------------------------------------------
[2025-10-12 20:47:17] 2025-10-13 00:46:31,728 | INFO     | 
[2025-10-12 20:47:17] 2025-10-13 00:46:31,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 20:47:17] 2025-10-13 00:46:31,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:47:17] 2025-10-13 00:46:31,771 | INFO     | job 6840182633 has completed (purged errors)
[2025-10-12 20:47:17] 2025-10-13 00:46:31,771 | INFO     | overall cleanup function is called
[2025-10-12 20:47:17] 2025-10-13 00:46:32,783 | INFO     | --- collectZombieJob: --- 10, [1318770]
[2025-10-12 20:47:17] 2025-10-13 00:46:32,783 | INFO     | zombie collector waiting for pid 1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:32,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:47:17] 2025-10-13 00:46:32,784 | INFO     | collected zombie processes
[2025-10-12 20:47:17] 2025-10-13 00:46:32,784 | INFO     | will attempt to kill all subprocesses of pid=1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:33,696 | INFO     | process IDs to be killed: [1318770] (in reverse order)
[2025-10-12 20:47:17] 2025-10-13 00:46:33,924 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:47:17] 2025-10-13 00:46:33,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:47:17] 2025-10-13 00:46:33,953 | INFO     | did not find any defunct processes belonging to 1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:33,979 | INFO     | did not find any defunct processes belonging to 1318770
[2025-10-12 20:47:17] 2025-10-13 00:46:33,980 | INFO     | ready for new job
[2025-10-12 20:47:17] 2025-10-13 00:46:33,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:47:17] 2025-10-13 00:46:33,985 | INFO     | ***************************************
[2025-10-12 20:47:17] 2025-10-13 00:46:33,985 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:47:17] 2025-10-13 00:46:33,986 | INFO     | ***************************************
[2025-10-12 20:47:17] 2025-10-13 00:46:33,986 | INFO     | 
[2025-10-12 20:47:17] 2025-10-13 00:46:34,011 | INFO     | architecture information:
[2025-10-12 20:47:17] 2025-10-13 00:46:34,012 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:47:17] 2025-10-13 00:46:34,041 | INFO     | cat /etc/os-release:
[2025-10-12 20:47:17] NAME="CentOS Linux"
[2025-10-12 20:47:17] VERSION="7 (Core)"
[2025-10-12 20:47:17] ID="centos"
[2025-10-12 20:47:17] ID_LIKE="rhel fedora"
[2025-10-12 20:47:17] VERSION_ID="7"
[2025-10-12 20:47:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:47:17] ANSI_COLOR="0;31"
[2025-10-12 20:47:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:47:17] HOME_URL="https://www.centos.org/"
[2025-10-12 20:47:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:47:17] 
[2025-10-12 20:47:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:47:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:47:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:47:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:47:17] 
[2025-10-12 20:47:17] 2025-10-13 00:46:34,042 | INFO     | ***************************************
[2025-10-12 20:47:17] 2025-10-13 00:46:34,545 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 20:47:17] 2025-10-13 00:46:34,579 | INFO     | sufficient remaining disk space (71424802816 B)
[2025-10-12 20:47:17] 2025-10-13 00:46:34,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:47:17] 2025-10-13 00:46:34,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:47:17] 2025-10-13 00:46:34,581 | INFO     | update_server=False
[2025-10-12 20:47:17] 2025-10-13 00:46:34,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:47:17] 2025-10-13 00:46:34,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:47:17] 2025-10-13 00:46:34,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:17] 2025-10-13 00:46:34,582 | INFO     | aborting loop
[2025-10-12 20:47:17] 2025-10-13 00:46:35,214 | INFO     | all payload control threads have been joined
[2025-10-12 20:47:17] 2025-10-13 00:46:35,459 | INFO     | all data control threads have been joined
[2025-10-12 20:47:17] 2025-10-13 00:46:35,586 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,587 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,807 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,810 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,837 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,910 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:35,993 | INFO     | all job control threads have been joined
[2025-10-12 20:47:17] 2025-10-13 00:46:36,219 | INFO     | [payload] control thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:36,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:36,463 | INFO     | [data] control thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:36,587 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:36,661 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:36,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:47:17] 2025-10-13 00:46:36,999 | INFO     | [job] control thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:37,052 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:37,086 | INFO     | [job] validate thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:37,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:47:17] 2025-10-13 00:46:37,739 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:46:41,514 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:47:17] 2025-10-13 00:47:05,830 | INFO     | PID=1312029 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:47:17] 2025-10-13 00:47:05,831 | INFO     | .. there are 10 such processes running
[2025-10-12 20:47:17] 2025-10-13 00:47:05,832 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:47:17] 2025-10-13 00:47:05,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:47:17] 2025-10-13 00:47:05,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:47:17] 2025-10-13 00:47:10,520 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:47:17] 2025-10-13 00:47:11,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482464384832)>', '<ExcThread(monitor, started 140481962944256)>']
[2025-10-12 20:47:17] 2025-10-13 00:47:11,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:47:17] 2025-10-13 00:47:11,856 | INFO     | [monitor] control thread has ended
[2025-10-12 20:47:17] 2025-10-13 00:47:16,783 | INFO     | all workflow threads have been joined
[2025-10-12 20:47:17] 2025-10-13 00:47:16,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:47:17] 2025-10-13 00:47:16,784 | INFO     | traces error code: 0
[2025-10-12 20:47:17] 2025-10-13 00:47:16,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:47:17] 2025-10-13 00:47:17,030 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:47:17] 2025-10-13 00:47:17,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:47:17] 2025-10-13 00:47:17,042 [wrapper] pilotpid: 1312029
[2025-10-12 20:47:17] 2025-10-13 00:47:17,047 [wrapper] Pilot exit status: 0
[2025-10-12 20:47:17] 2025-10-13 00:47:17,071 [wrapper] pandaids: 6840182633
[2025-10-12 20:47:17] 2025-10-13 00:47:17,229 [wrapper] cleanup supervisor_pilot 1869053 1312030
[2025-10-12 20:47:17] 2025-10-13 00:47:17,236 [wrapper] Test setup, not cleaning
[2025-10-12 20:47:17] 2025-10-13 00:47:17,242 [wrapper] apfmon messages muted
[2025-10-12 20:47:17] 2025-10-13 00:47:17,247 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:47:17] 2025-10-13 00:47:17,252 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:47:17]  *** Error codes and diagnostics ***
[2025-10-12 20:47:17]     "exeErrorCode": 0,
[2025-10-12 20:47:17]     "exeErrorDiag": "",
[2025-10-12 20:47:17]     "pilotErrorCode": 0,
[2025-10-12 20:47:17]     "pilotErrorDiag": "",
[2025-10-12 20:47:17]  *** Listing of results directory ***
[2025-10-12 20:47:17] total 417936
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:58 queuedata.json
[2025-10-12 20:47:17] -rwx------. 1 boincer umatlas     36292 Oct 12 10:58 runpilot2-wrapper.sh
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:47:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:23 run_atlas
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:23 job.xml
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas 222925728 Oct 12 17:23 EVNT.46676267._004543.pool.root.1
[2025-10-12 20:47:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:23 shared
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:23 input.tar.gz
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:23 start_atlas.sh
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:23 boinc_lockfile
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:23 pandaJob.out
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas    975528 Oct 12 17:23 agis_schedconf.cvmfs.json
[2025-10-12 20:47:17] drwx------. 5 boincer umatlas      4096 Oct 12 17:23 pilot3
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 20:38 init_data.xml
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas 196912909 Oct 12 20:44 HITS.46676269._081448.pool.root.1
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas       532 Oct 12 20:44 boinc_task_state.xml
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas        95 Oct 12 20:46 pilot_heartbeat.json
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas      1037 Oct 12 20:46 memory_monitor_summary.json
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas    451265 Oct 12 20:46 log.46676269._081448.job.log.tgz.1
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas      7830 Oct 12 20:46 heartbeat.json
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:47 boinc_mmap_file
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas        29 Oct 12 20:47 wrapper_checkpoint.txt
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas      4824 Oct 12 20:47 pilotlog.txt
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas   1658808 Oct 12 20:47 log.46676269._081448.job.log.1
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas       357 Oct 12 20:47 output.list
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:47 runtime_log
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas   2129920 Oct 12 20:47 result.tar.gz
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas       656 Oct 12 20:47 xFaNDmbhCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmULkNDmHfDaDm.diag
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 20:47 runtime_log.err
[2025-10-12 20:47:17] -rw-r--r--. 1 boincer umatlas     20944 Oct 12 20:47 stderr.txt
[2025-10-12 20:47:17] HITS file was successfully produced:
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas 196912909 Oct 12 20:44 shared/HITS.pool.root.1
[2025-10-12 20:47:17]  *** Contents of shared directory: ***
[2025-10-12 20:47:17] total 412668
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas 222925728 Oct 12 17:23 ATLAS.root_0
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:23 input.tar.gz
[2025-10-12 20:47:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:23 start_atlas.sh
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas 196912909 Oct 12 20:44 HITS.pool.root.1
[2025-10-12 20:47:17] -rw-------. 1 boincer umatlas   2129920 Oct 12 20:47 result.tar.gz
20:47:19 (1308261): run_atlas exited; CPU time 99748.002060
20:47:19 (1308261): called boinc_finish(0)

</stderr_txt>
]]>

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