Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:39:33 (2052517): wrapper (7.7.26015): starting
07:39:33 (2052517): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 07:39:33] Arguments: --nthreads 4
[2025-10-13 07:39:33] Threads: 4
[2025-10-13 07:39:33] Checking for CVMFS
[2025-10-13 07:39:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:39:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:39:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:39:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:39:33] 2.9.2.0 168809 5293 97232 151650 1 57 29771904 36864001 0 130560 0 4898545 99.992 184489 857 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 07:39:33] CVMFS is ok
[2025-10-13 07:39:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:39:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:39:33] Further information can be found at the LHC@home message board.
[2025-10-13 07:39:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:39:33] Checking for apptainer binary...
[2025-10-13 07:39:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:39:33] Running /usr/bin/apptainer --version
[2025-10-13 07:39:33] apptainer version 1.4.1-1.1
[2025-10-13 07:39:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:39:33] thA334
[2025-10-13 07:39:33] apptainer works
[2025-10-13 07:39:33] Set ATHENA_PROC_NUMBER=4
[2025-10-13 07:39:33] Set ATHENA_CORE_NUMBER=4
[2025-10-13 07:39:33] Starting ATLAS job with PandaID=6840428566
[2025-10-13 07:39:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:55:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:55:02] 2025-10-13 06:54:45,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:55:02] 2025-10-13 06:54:45,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:55:02] 2025-10-13 06:54:45,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:55:02] 2025-10-13 06:54:45,309 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:55:02] 2025-10-13 06:54:45,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:55:02] 2025-10-13 06:54:45,309 | INFO     | will abort loop
[2025-10-13 08:55:02] 2025-10-13 06:54:45,356 | INFO     | all payload control threads have been joined
[2025-10-13 08:55:02] 2025-10-13 06:54:45,507 | INFO     | all data control threads have been joined
[2025-10-13 08:55:02] 2025-10-13 06:54:45,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:55:02] 2025-10-13 06:54:45,982 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:55:02] 2025-10-13 06:54:46,034 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,034 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,122 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,161 | INFO     | all job control threads have been joined
[2025-10-13 08:55:02] 2025-10-13 06:54:46,314 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,357 | INFO     | [payload] control thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,379 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,423 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,513 | INFO     | [data] control thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:46,821 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,163 | INFO     | [job] control thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,331 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,424 | INFO     | [job] validate thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,705 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:47,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:55:02] 2025-10-13 06:54:51,907 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:55,917 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:55:02] 2025-10-13 06:54:56,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:55:02] 2025-10-13 06:54:57,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910191093568)>', '<ExcThread(monitor, started 139908878423808)>']
[2025-10-13 08:55:02] 2025-10-13 06:54:58,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:55:02] 2025-10-13 06:54:58,099 | INFO     | [monitor] control thread has ended
[2025-10-13 08:55:02] 2025-10-13 06:55:02,260 | INFO     | all workflow threads have been joined
[2025-10-13 08:55:02] 2025-10-13 06:55:02,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:55:02] 2025-10-13 06:55:02,260 | INFO     | traces error code: 0
[2025-10-13 08:55:02] 2025-10-13 06:55:02,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:55:02] 2025-10-13 06:55:02,328 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:55:02] 2025-10-13 06:55:02,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:55:02] 2025-10-13 06:55:02,336 [wrapper] pilotpid: 2056299
[2025-10-13 08:55:02] 2025-10-13 06:55:02,339 [wrapper] Pilot exit status: 0
[2025-10-13 08:55:02] 2025-10-13 06:55:02,350 [wrapper] pandaids: 6840428566
[2025-10-13 08:55:02] 2025-10-13 06:55:02,371 [wrapper] cleanup supervisor_pilot 2075870 2056300
[2025-10-13 08:55:02] 2025-10-13 06:55:02,375 [wrapper] Test setup, not cleaning
[2025-10-13 08:55:02] 2025-10-13 06:55:02,378 [wrapper] apfmon messages muted
[2025-10-13 08:55:02] 2025-10-13 06:55:02,381 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:55:02] 2025-10-13 06:55:02,385 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:55:02]  *** Error codes and diagnostics ***
[2025-10-13 08:55:02]     "exeErrorCode": 0,
[2025-10-13 08:55:02]     "exeErrorDiag": "",
[2025-10-13 08:55:02]     "pilotErrorCode": 0,
[2025-10-13 08:55:02]     "pilotErrorDiag": "",
[2025-10-13 08:55:02]  *** Listing of results directory ***
[2025-10-13 08:55:02] total 416184
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 08:55:02] -rwx------ 1 boinc boinc     36292 Oct 12 18:54 runpilot2-wrapper.sh
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:54 queuedata.json
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:55:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:39 run_atlas
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:39 job.xml
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc 219577043 Oct 13 07:39 EVNT.46676267._004791.pool.root.1
[2025-10-13 08:55:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:39 shared
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc    569676 Oct 13 07:39 input.tar.gz
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:39 start_atlas.sh
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:39 boinc_setup_complete
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      6368 Oct 13 07:39 init_data.xml
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:39 boinc_lockfile
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 07:39 pandaJob.out
[2025-10-13 08:55:02] -rw------- 1 boinc boinc    973230 Oct 13 07:39 agis_schedconf.cvmfs.json
[2025-10-13 08:55:02] -rw------- 1 boinc boinc   1560580 Oct 13 07:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:55:02] drwx------ 5 boinc boinc      4096 Oct 13 07:39 pilot3
[2025-10-13 08:55:02] -rw------- 1 boinc boinc        95 Oct 13 08:54 pilot_heartbeat.json
[2025-10-13 08:55:02] -rw------- 1 boinc boinc 200839642 Oct 13 08:54 HITS.46676269._084168.pool.root.1
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:54 boinc_task_state.xml
[2025-10-13 08:55:02] -rw------- 1 boinc boinc      1021 Oct 13 08:54 memory_monitor_summary.json
[2025-10-13 08:55:02] -rw------- 1 boinc boinc    268564 Oct 13 08:54 log.46676269._084168.job.log.tgz.1
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:54 boinc_mmap_file
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:54 wrapper_checkpoint.txt
[2025-10-13 08:55:02] -rw------- 1 boinc boinc      7766 Oct 13 08:54 heartbeat.json
[2025-10-13 08:55:02] -rw------- 1 boinc boinc      4814 Oct 13 08:55 pilotlog.txt
[2025-10-13 08:55:02] -rw------- 1 boinc boinc    666643 Oct 13 08:55 log.46676269._084168.job.log.1
[2025-10-13 08:55:02] -rw------- 1 boinc boinc       357 Oct 13 08:55 output.list
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:55 runtime_log
[2025-10-13 08:55:02] -rw------- 1 boinc boinc    952320 Oct 13 08:55 result.tar.gz
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      8777 Oct 13 08:55 runtime_log.err
[2025-10-13 08:55:02] -rw------- 1 boinc boinc       658 Oct 13 08:55 qqRNDmMWES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOkkNDmt3Yxyn.diag
[2025-10-13 08:55:02] -rw-r--r-- 1 boinc boinc      7076 Oct 13 08:55 stderr.txt
[2025-10-13 08:55:02] HITS file was successfully produced:
[2025-10-13 08:55:02] -rw------- 1 boinc boinc 200839642 Oct 13 08:54 shared/HITS.pool.root.1
[2025-10-13 08:55:02]  *** Contents of shared directory: ***
[2025-10-13 08:55:02] total 412084
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc 219577043 Oct 13 07:39 ATLAS.root_0
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc    569676 Oct 13 07:39 input.tar.gz
[2025-10-13 08:55:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:39 start_atlas.sh
[2025-10-13 08:55:02] -rw------- 1 boinc boinc 200839642 Oct 13 08:54 HITS.pool.root.1
[2025-10-13 08:55:02] -rw------- 1 boinc boinc    952320 Oct 13 08:55 result.tar.gz
08:55:04 (2052517): run_atlas exited; CPU time 16811.156762
08:55:04 (2052517): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN