Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:24 (30422): wrapper (7.7.26015): starting
17:04:24 (30422): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:04:24] Arguments: --nthreads 12
[2025-10-12 17:04:24] Threads: 12
[2025-10-12 17:04:24] Checking for CVMFS
[2025-10-12 17:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:04:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:04:24] 2.11.2.0 2925 223398 97404 151636 2 59 11730957 20275201 1 130560 1 108776260 99.985 12908906 12183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:04:24] CVMFS is ok
[2025-10-12 17:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:04:24] Further information can be found at the LHC@home message board.
[2025-10-12 17:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:04:24] Checking for apptainer binary...
[2025-10-12 17:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:04:24] Running /usr/bin/apptainer --version
[2025-10-12 17:04:24] apptainer version 1.3.2-1.el7
[2025-10-12 17:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:04:26] c-205-10.aglt2.org
[2025-10-12 17:04:26] apptainer works
[2025-10-12 17:04:26] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:04:26] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:04:26] Starting ATLAS job with PandaID=6840429854
[2025-10-12 17:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:23:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:23:05]  status=None
[2025-10-12 18:23:05]  status_code=0
[2025-10-12 18:23:05]  storage_token=
[2025-10-12 18:23:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840429854/log.46676269._084967.job.log.tgz.1
[2025-10-12 18:23:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/fd/log.46676269._084967.job.log.tgz.1
[2025-10-12 18:23:05]  workdir=None
[2025-10-12 18:23:05] ]
[2025-10-12 18:23:05] 2025-10-12 22:22:25,666 | INFO     | transferring file log.46676269._084967.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840429854/log.46676269._084967.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:23:05] 2025-10-12 22:22:25,666 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840429854/log.46676269._084967.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._084967.job
[2025-10-12 18:23:05] 2025-10-12 22:22:25,689 | INFO     | adding to output.list: log.46676269._084967.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/fd/log.46676269._084967.job.log.tg
[2025-10-12 18:23:05] 2025-10-12 22:22:25,690 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:23:05] 2025-10-12 22:22:25,690 | INFO     | summary of transferred files:
[2025-10-12 18:23:05] 2025-10-12 22:22:25,690 | INFO     |  -- lfn=log.46676269._084967.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:23:05] 2025-10-12 22:22:25,691 | INFO     | stage-out finished correctly
[2025-10-12 18:23:05] 2025-10-12 22:22:26,060 | INFO     | time since job start (4665s) is within the limit (172800.0s)
[2025-10-12 18:23:05] 2025-10-12 22:22:26,501 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:23:05] 2025-10-12 22:22:27,423 | INFO     | monitor loop #349: job 0:6840429854 is in state 'finished'
[2025-10-12 18:23:05] 2025-10-12 22:22:27,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:23:05] 2025-10-12 22:22:27,710 | INFO     | job 6840429854 has state=finished
[2025-10-12 18:23:05] 2025-10-12 22:22:27,710 | INFO     | preparing for final server update for job 6840429854 in state='finished'
[2025-10-12 18:23:05] 2025-10-12 22:22:27,711 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:23:05] 2025-10-12 22:22:27,711 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:23:05] 2025-10-12 22:22:27,711 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:23:05] 2025-10-12 22:22:27,711 | INFO     | job 6840429854 has finished - writing final server update
[2025-10-12 18:23:05] 2025-10-12 22:22:27,712 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:23:05] 2025-10-12 22:22:27,712 | INFO     | executing command: lscpu
[2025-10-12 18:23:05] 2025-10-12 22:22:27,741 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:23:05] 2025-10-12 22:22:28,066 | INFO     | time since job start (4667s) is within the limit (172800.0s)
[2025-10-12 18:23:05] 2025-10-12 22:22:29,927 | INFO     | monitor loop #350: job 0:6840429854 is in state 'finished'
[2025-10-12 18:23:05] 2025-10-12 22:22:29,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:23:05] 2025-10-12 22:22:30,072 | INFO     | time since job start (4669s) is within the limit (172800.0s)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,078 | INFO     | time since job start (4671s) is within the limit (172800.0s)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,430 | INFO     | monitor loop #351: job 0:6840429854 is in state 'finished'
[2025-10-12 18:23:05] 2025-10-12 22:22:32,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,602 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:23:05] 2025-10-12 22:22:32,606 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 18:23:05] 2025-10-12 22:22:32,608 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840429854/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,608 | INFO     | extracted standard info from prmon json
[2025-10-12 18:23:05] 2025-10-12 22:22:32,609 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:23:05] 2025-10-12 22:22:32,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:23:05] 2025-10-12 22:22:32,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:23:05] 2025-10-12 22:22:32,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:23:05] 2025-10-12 22:22:32,611 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:23:05] 2025-10-12 22:22:32,611 | INFO     | sum of square deviations: 101843770.0
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | sum of deviations: -931940676.0000001
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | mean x: 1760305489.0
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | mean y: 2685020.5942028984
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | -- intersect: 16110693270.73234
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | intersect: 16110693270.73234
[2025-10-12 18:23:05] 2025-10-12 22:22:32,612 | INFO     | chi2: 0.027455918754324148
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | -- intersect: 16110693270.73234
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | current memory leak: -9.15 B/s (using 69 data points, chi2=0.03)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | ..............................
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | . Timing measurements:
[2025-10-12 18:23:05] 2025-10-12 22:22:32,613 | INFO     | . get job = 0 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . initial setup = 2 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . payload setup = 7 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . stage-in = 0 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . payload execution = 4636 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . stage-out = 0 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | . log creation = 0 s
[2025-10-12 18:23:05] 2025-10-12 22:22:32,614 | INFO     | ..............................
[2025-10-12 18:23:05] 2025-10-12 22:22:33,117 | INFO     | 
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | job summary report
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | --------------------------------------------------
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | PanDA job id: 6840429854
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | task id: 46676269
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | errors: (none)
[2025-10-12 18:23:05] 2025-10-12 22:22:33,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | pilot state: finished 
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | transexitcode: 0
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | exeerrorcode: 0
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | exeerrordiag: 
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | exitcode: 0
[2025-10-12 18:23:05] 2025-10-12 22:22:33,119 | INFO     | exitmsg: OK
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | cpuconsumptiontime: 48606 s
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | nevents: 400
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | neventsw: 0
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | pid: 8732
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | pgrp: 8732
[2025-10-12 18:23:05] 2025-10-12 22:22:33,120 | INFO     | corecount: 12
[2025-10-12 18:23:05] 2025-10-12 22:22:33,121 | INFO     | event service: False
[2025-10-12 18:23:05] 2025-10-12 22:22:33,121 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4647: 2375307, 4648: 2384305, 4649: 2384361, 4655: 2384683}
[2025-10-12 18:23:05] 2025-10-12 22:22:33,121 | INFO     | --------------------------------------------------
[2025-10-12 18:23:05] 2025-10-12 22:22:33,121 | INFO     | 
[2025-10-12 18:23:05] 2025-10-12 22:22:33,121 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:23:05] 2025-10-12 22:22:33,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:23:05] 2025-10-12 22:22:33,148 | INFO     | job 6840429854 has completed (purged errors)
[2025-10-12 18:23:05] 2025-10-12 22:22:33,149 | INFO     | overall cleanup function is called
[2025-10-12 18:23:05] 2025-10-12 22:22:34,157 | INFO     | --- collectZombieJob: --- 10, [8732]
[2025-10-12 18:23:05] 2025-10-12 22:22:34,157 | INFO     | zombie collector waiting for pid 8732
[2025-10-12 18:23:05] 2025-10-12 22:22:34,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:23:05] 2025-10-12 22:22:34,157 | INFO     | collected zombie processes
[2025-10-12 18:23:05] 2025-10-12 22:22:34,158 | INFO     | will attempt to kill all subprocesses of pid=8732
[2025-10-12 18:23:05] 2025-10-12 22:22:34,259 | INFO     | process IDs to be killed: [8732] (in reverse order)
[2025-10-12 18:23:05] 2025-10-12 22:22:34,312 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:23:05] 2025-10-12 22:22:34,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:23:05] 2025-10-12 22:22:34,315 | INFO     | did not find any defunct processes belonging to 8732
[2025-10-12 18:23:05] 2025-10-12 22:22:34,317 | INFO     | did not find any defunct processes belonging to 8732
[2025-10-12 18:23:05] 2025-10-12 22:22:34,317 | INFO     | ready for new job
[2025-10-12 18:23:05] 2025-10-12 22:22:34,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:23:05] 2025-10-12 22:22:34,319 | INFO     | ***************************************
[2025-10-12 18:23:05] 2025-10-12 22:22:34,319 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:23:05] 2025-10-12 22:22:34,319 | INFO     | ***************************************
[2025-10-12 18:23:05] 2025-10-12 22:22:34,319 | INFO     | 
[2025-10-12 18:23:05] 2025-10-12 22:22:34,319 | INFO     | architecture information:
[2025-10-12 18:23:05] 2025-10-12 22:22:34,320 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:23:05] 2025-10-12 22:22:34,335 | INFO     | cat /etc/os-release:
[2025-10-12 18:23:05] NAME="CentOS Linux"
[2025-10-12 18:23:05] VERSION="7 (Core)"
[2025-10-12 18:23:05] ID="centos"
[2025-10-12 18:23:05] ID_LIKE="rhel fedora"
[2025-10-12 18:23:05] VERSION_ID="7"
[2025-10-12 18:23:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:23:05] ANSI_COLOR="0;31"
[2025-10-12 18:23:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:23:05] HOME_URL="https://www.centos.org/"
[2025-10-12 18:23:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:23:05] 
[2025-10-12 18:23:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:23:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:23:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:23:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:23:05] 
[2025-10-12 18:23:05] 2025-10-12 22:22:34,335 | INFO     | ***************************************
[2025-10-12 18:23:05] 2025-10-12 22:22:34,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:23:05] 2025-10-12 22:22:34,913 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-10-12 18:23:05] 2025-10-12 22:22:34,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:23:05] 2025-10-12 22:22:34,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:23:05] 2025-10-12 22:22:34,914 | INFO     | update_server=False
[2025-10-12 18:23:05] 2025-10-12 22:22:34,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:23:05] 2025-10-12 22:22:34,933 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:23:05] 2025-10-12 22:22:34,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:23:05] 2025-10-12 22:22:34,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:23:05] 2025-10-12 22:22:34,934 | INFO     | will abort loop
[2025-10-12 18:23:05] 2025-10-12 22:22:35,267 | INFO     | all data control threads have been joined
[2025-10-12 18:23:05] 2025-10-12 22:22:35,464 | INFO     | all payload control threads have been joined
[2025-10-12 18:23:05] 2025-10-12 22:22:35,920 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:35,920 | INFO     | [job] validate thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:35,939 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,002 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,104 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,272 | INFO     | [data] control thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:23:05] 2025-10-12 22:22:36,324 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,352 | INFO     | all job control threads have been joined
[2025-10-12 18:23:05] 2025-10-12 22:22:36,469 | INFO     | [payload] control thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:36,693 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:37,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:23:05] 2025-10-12 22:22:37,105 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:37,240 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:37,353 | INFO     | [job] control thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:37,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:23:05] 2025-10-12 22:22:38,292 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:38,715 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:41,100 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:45,410 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:23:05] 2025-10-12 22:22:46,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:23:05] 2025-10-12 22:22:48,179 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:23:05] 2025-10-12 22:22:49,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400853768000)>', '<ExcThread(monitor, started 140400174024448)>']
[2025-10-12 18:23:05] 2025-10-12 22:22:54,766 | INFO     | all workflow threads have been joined
[2025-10-12 18:23:05] 2025-10-12 22:22:54,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:23:05] 2025-10-12 22:22:54,766 | INFO     | traces error code: 0
[2025-10-12 18:23:05] 2025-10-12 22:22:54,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:23:05] 2025-10-12 22:23:05,282 | INFO     | PID=1717 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:23:05] 2025-10-12 22:23:05,283 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:23:05] 2025-10-12 22:23:05,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:23:05] 2025-10-12 22:23:05,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:23:05] 2025-10-12 22:23:05,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:23:05] 2025-10-12 22:23:05,283 | INFO     | [monitor] control thread has ended
[2025-10-12 18:23:05] 2025-10-12 22:23:05,369 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:23:05] 2025-10-12 22:23:05,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:23:05] 2025-10-12 22:23:05,377 [wrapper] pilotpid: 1717
[2025-10-12 18:23:05] 2025-10-12 22:23:05,381 [wrapper] Pilot exit status: 0
[2025-10-12 18:23:05] 2025-10-12 22:23:05,397 [wrapper] pandaids: 6840429854
[2025-10-12 18:23:05] 2025-10-12 22:23:05,439 [wrapper] cleanup supervisor_pilot 10356 1718
[2025-10-12 18:23:05] 2025-10-12 22:23:05,443 [wrapper] Test setup, not cleaning
[2025-10-12 18:23:05] 2025-10-12 22:23:05,447 [wrapper] apfmon messages muted
[2025-10-12 18:23:05] 2025-10-12 22:23:05,451 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:23:05] 2025-10-12 22:23:05,455 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:23:05]  *** Error codes and diagnostics ***
[2025-10-12 18:23:05]     "exeErrorCode": 0,
[2025-10-12 18:23:05]     "exeErrorDiag": "",
[2025-10-12 18:23:05]     "pilotErrorCode": 0,
[2025-10-12 18:23:05]     "pilotErrorDiag": "",
[2025-10-12 18:23:05]  *** Listing of results directory ***
[2025-10-12 18:23:05] total 417376
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:35 queuedata.json
[2025-10-12 18:23:05] -rwx------ 1 boincer umatlas     36292 Oct 12 13:36 runpilot2-wrapper.sh
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:23:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:04 run_atlas
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:04 job.xml
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas 220111838 Oct 12 17:04 EVNT.46676267._004848.pool.root.1
[2025-10-12 18:23:05] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:04 shared
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 17:04 input.tar.gz
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:04 start_atlas.sh
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:04 boinc_lockfile
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 17:04 pandaJob.out
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas    975536 Oct 12 17:04 agis_schedconf.cvmfs.json
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas   1560580 Oct 12 17:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:23:05] drwx------ 5 boincer umatlas      4096 Oct 12 17:04 pilot3
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas       529 Oct 12 18:21 boinc_task_state.xml
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas 201234307 Oct 12 18:21 HITS.46676269._084967.pool.root.1
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 18:22 init_data.xml
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas      1049 Oct 12 18:22 memory_monitor_summary.json
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas    396666 Oct 12 18:22 log.46676269._084967.job.log.tgz.1
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas      7854 Oct 12 18:22 heartbeat.json
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:22 boinc_mmap_file
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:22 wrapper_checkpoint.txt
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas        95 Oct 12 18:23 pilot_heartbeat.json
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas       744 Oct 12 18:23 pilotlog.txt
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas    675626 Oct 12 18:23 log.46676269._084967.job.log.1
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas       357 Oct 12 18:23 output.list
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:23 runtime_log
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas   1095680 Oct 12 18:23 result.tar.gz
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 18:23 runtime_log.err
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas       659 Oct 12 18:23 beXMDmNAFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYYUMDmhqOten.diag
[2025-10-12 18:23:05] -rw-r--r-- 1 boincer umatlas     21950 Oct 12 18:23 stderr.txt
[2025-10-12 18:23:05] HITS file was successfully produced:
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas 201234307 Oct 12 18:21 shared/HITS.pool.root.1
[2025-10-12 18:23:05]  *** Contents of shared directory: ***
[2025-10-12 18:23:05] total 413128
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas 220111838 Oct 12 17:04 ATLAS.root_0
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 17:04 input.tar.gz
[2025-10-12 18:23:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:04 start_atlas.sh
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas 201234307 Oct 12 18:21 HITS.pool.root.1
[2025-10-12 18:23:05] -rw------- 1 boincer umatlas   1095680 Oct 12 18:23 result.tar.gz
18:23:07 (30422): run_atlas exited; CPU time 48527.441304
18:23:07 (30422): called boinc_finish(0)

</stderr_txt>
]]>

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