Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:07 (2143): wrapper (7.7.26015): starting
08:27:07 (2143): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:27:07] Arguments: --nthreads 8
[2025-10-13 08:27:07] Threads: 8
[2025-10-13 08:27:07] Checking for CVMFS
[2025-10-13 08:27:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:27:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:27:10] 2.11.2.0 23903 19626 82840 151650 0 61 14234027 25165825 4632 130560 0 5885888 99.972 1800117 1395 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 08:27:10] CVMFS is ok
[2025-10-13 08:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:27:10] Checking for apptainer binary...
[2025-10-13 08:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:27:10] Running /usr/bin/apptainer --version
[2025-10-13 08:27:10] apptainer version 1.3.2-1.el7
[2025-10-13 08:27:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:27:14] cg-vwn444.simple-grid.lan
[2025-10-13 08:27:14] apptainer works
[2025-10-13 08:27:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:27:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:27:14] Starting ATLAS job with PandaID=6840713053
[2025-10-13 08:27:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:52:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:52:18] 2025-10-13 10:51:40,663 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:52:18] 2025-10-13 10:51:40,664 | INFO     | sum of square deviations: 4729621702.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,666 | INFO     | sum of deviations: 62391415825.49999
[2025-10-13 12:52:18] 2025-10-13 10:51:40,667 | INFO     | mean x: 1760345026.5
[2025-10-13 12:52:18] 2025-10-13 10:51:40,667 | INFO     | mean y: 2461008.2620967743
[2025-10-13 12:52:18] 2025-10-13 10:51:40,667 | INFO     | -- intersect: -23219357873.84187
[2025-10-13 12:52:18] 2025-10-13 10:51:40,667 | INFO     | intersect: -23219357873.84187
[2025-10-13 12:52:18] 2025-10-13 10:51:40,668 | INFO     | chi2: 6.313004897550287
[2025-10-13 12:52:18] 2025-10-13 10:51:40,668 | INFO     | sum of square deviations: 4449281562.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,670 | INFO     | sum of deviations: 77594328248.00002
[2025-10-13 12:52:18] 2025-10-13 10:51:40,670 | INFO     | mean x: 1760344874.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | mean y: 2469131.880658436
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | -- intersect: -30697493565.341927
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | intersect: -30697493565.341927
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | chi2: 5.590990062647975
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | current chi2=5.590990062647975 (change=11.436944000827303 %)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,671 | INFO     | right removable region: 242
[2025-10-13 12:52:18] 2025-10-13 10:51:40,672 | INFO     | sum of square deviations: 4449281562.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,674 | INFO     | sum of deviations: -21811875651.99999
[2025-10-13 12:52:18] 2025-10-13 10:51:40,674 | INFO     | mean x: 1760345179.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,674 | INFO     | mean y: 2506766.716049383
[2025-10-13 12:52:18] 2025-10-13 10:51:40,674 | INFO     | -- intersect: 8632311289.96273
[2025-10-13 12:52:18] 2025-10-13 10:51:40,674 | INFO     | intersect: 8632311289.96273
[2025-10-13 12:52:18] 2025-10-13 10:51:40,675 | INFO     | chi2: 1.7955849006178732
[2025-10-13 12:52:18] 2025-10-13 10:51:40,675 | INFO     | current chi2=1.7955849006178732 (change=71.5573656324164 %)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,675 | INFO     | sum of square deviations: 4180243959.5
[2025-10-13 12:52:18] 2025-10-13 10:51:40,684 | INFO     | sum of deviations: -51596743951.5
[2025-10-13 12:52:18] 2025-10-13 10:51:40,684 | INFO     | mean x: 1760345331.5
[2025-10-13 12:52:18] 2025-10-13 10:51:40,684 | INFO     | mean y: 2523515.231092437
[2025-10-13 12:52:18] 2025-10-13 10:51:40,684 | INFO     | -- intersect: 21730462892.8381
[2025-10-13 12:52:18] 2025-10-13 10:51:40,684 | INFO     | intersect: 21730462892.8381
[2025-10-13 12:52:18] 2025-10-13 10:51:40,685 | INFO     | chi2: 0.9654165451962439
[2025-10-13 12:52:18] 2025-10-13 10:51:40,685 | INFO     | current chi2=0.9654165451962439 (change=46.23386814714039 %)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,686 | INFO     | sum of square deviations: 3922276332.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,687 | INFO     | sum of deviations: -49169918640.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,688 | INFO     | mean x: 1760345484.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,688 | INFO     | mean y: 2522047.982832618
[2025-10-13 12:52:18] 2025-10-13 10:51:40,688 | INFO     | -- intersect: 22070330866.14323
[2025-10-13 12:52:18] 2025-10-13 10:51:40,688 | INFO     | intersect: 22070330866.14323
[2025-10-13 12:52:18] 2025-10-13 10:51:40,689 | INFO     | chi2: 0.9504246823863458
[2025-10-13 12:52:18] 2025-10-13 10:51:40,689 | INFO     | current chi2=0.9504246823863458 (change=1.5528906029728968 %)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,689 | INFO     | left removable region: 30
[2025-10-13 12:52:18] 2025-10-13 10:51:40,689 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,691 | INFO     | sum of deviations: -9877938223.500004
[2025-10-13 12:52:18] 2025-10-13 10:51:40,691 | INFO     | mean x: 1760345758.5
[2025-10-13 12:52:18] 2025-10-13 10:51:40,691 | INFO     | mean y: 2516662.1556603773
[2025-10-13 12:52:18] 2025-10-13 10:51:40,691 | INFO     | -- intersect: 5888078679.522245
[2025-10-13 12:52:18] 2025-10-13 10:51:40,691 | INFO     | intersect: 5888078679.522245
[2025-10-13 12:52:18] 2025-10-13 10:51:40,692 | INFO     | chi2: 0.08365039776549174
[2025-10-13 12:52:18] 2025-10-13 10:51:40,692 | INFO     | -- intersect: 5888078679.522245
[2025-10-13 12:52:18] 2025-10-13 10:51:40,692 | INFO     | current memory leak: -3.34 B/s (using 212 data points, chi2=0.08)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | ..............................
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | . Timing measurements:
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | . get job = 0 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | . initial setup = 6 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,693 | INFO     | . payload setup = 120 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,694 | INFO     | . stage-in = 0 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,694 | INFO     | . payload execution = 15259 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,694 | INFO     | . stage-out = 3 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,694 | INFO     | . log creation = 1 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,694 | INFO     | ..............................
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | 
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | job summary report
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | --------------------------------------------------
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | PanDA job id: 6840713053
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | task id: 46676269
[2025-10-13 12:52:18] 2025-10-13 10:51:40,868 | INFO     | errors: (none)
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | pilot state: finished 
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | transexitcode: 0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | exeerrorcode: 0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | exeerrordiag: 
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | exitcode: 0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | exitmsg: OK
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | cpuconsumptiontime: 57045 s
[2025-10-13 12:52:18] 2025-10-13 10:51:40,869 | INFO     | nevents: 400
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | neventsw: 0
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | pid: 12460
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | pgrp: 12460
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | corecount: 8
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | event service: False
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | sizes: {0: 2348629, 1: 2348884, 2: 2348884, 12: 2348912, 23: 2348940, 34: 2348968, 45: 2349124, 55: 2349152, 66: 2349180, 77: 2349208, 86: 2349526, 88: 2349834, 15
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | --------------------------------------------------
[2025-10-13 12:52:18] 2025-10-13 10:51:40,870 | INFO     | 
[2025-10-13 12:52:18] 2025-10-13 10:51:40,871 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-13 12:52:18] 2025-10-13 10:51:41,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | job 6840713053 has completed (purged errors)
[2025-10-13 12:52:18] 2025-10-13 10:51:41,365 | INFO     | overall cleanup function is called
[2025-10-13 12:52:18] 2025-10-13 10:51:42,375 | INFO     | --- collectZombieJob: --- 10, [12460]
[2025-10-13 12:52:18] 2025-10-13 10:51:42,375 | INFO     | zombie collector waiting for pid 12460
[2025-10-13 12:52:18] 2025-10-13 10:51:42,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:52:18] 2025-10-13 10:51:42,375 | INFO     | collected zombie processes
[2025-10-13 12:52:18] 2025-10-13 10:51:42,375 | INFO     | will attempt to kill all subprocesses of pid=12460
[2025-10-13 12:52:18] 2025-10-13 10:51:42,500 | INFO     | process IDs to be killed: [12460] (in reverse order)
[2025-10-13 12:52:18] 2025-10-13 10:51:43,214 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:52:18] 2025-10-13 10:51:43,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:52:18] 2025-10-13 10:51:43,218 | INFO     | did not find any defunct processes belonging to 12460
[2025-10-13 12:52:18] 2025-10-13 10:51:43,222 | INFO     | did not find any defunct processes belonging to 12460
[2025-10-13 12:52:18] 2025-10-13 10:51:43,223 | INFO     | ready for new job
[2025-10-13 12:52:18] 2025-10-13 10:51:43,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:52:18] 2025-10-13 10:51:43,225 | INFO     | ***************************************
[2025-10-13 12:52:18] 2025-10-13 10:51:43,225 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:52:18] 2025-10-13 10:51:43,225 | INFO     | ***************************************
[2025-10-13 12:52:18] 2025-10-13 10:51:43,226 | INFO     | 
[2025-10-13 12:52:18] 2025-10-13 10:51:43,226 | INFO     | pilot is running in a VM
[2025-10-13 12:52:18] 2025-10-13 10:51:43,226 | INFO     | architecture information:
[2025-10-13 12:52:18] 2025-10-13 10:51:43,241 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:52:18] 2025-10-13 10:51:43,490 | INFO     | cat /etc/os-release:
[2025-10-13 12:52:18] NAME="CentOS Linux"
[2025-10-13 12:52:18] VERSION="7 (Core)"
[2025-10-13 12:52:18] ID="centos"
[2025-10-13 12:52:18] ID_LIKE="rhel fedora"
[2025-10-13 12:52:18] VERSION_ID="7"
[2025-10-13 12:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:52:18] ANSI_COLOR="0;31"
[2025-10-13 12:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:52:18] HOME_URL="https://www.centos.org/"
[2025-10-13 12:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:52:18] 
[2025-10-13 12:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:52:18] 
[2025-10-13 12:52:18] 2025-10-13 10:51:43,491 | INFO     | ***************************************
[2025-10-13 12:52:18] 2025-10-13 10:51:43,994 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-13 12:52:18] 2025-10-13 10:51:44,200 | INFO     | sufficient remaining disk space (495895707648 B)
[2025-10-13 12:52:18] 2025-10-13 10:51:44,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:52:18] 2025-10-13 10:51:44,200 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:52:18] 2025-10-13 10:51:44,200 | INFO     | update_server=False
[2025-10-13 12:52:18] 2025-10-13 10:51:44,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:52:18] 2025-10-13 10:51:44,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:52:18] 2025-10-13 10:51:44,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:52:18] 2025-10-13 10:51:44,213 | INFO     | all data control threads have been joined
[2025-10-13 12:52:18] 2025-10-13 10:51:44,504 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 12:52:18] 2025-10-13 10:51:44,504 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 12:52:18] 2025-10-13 10:51:44,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:52:18] 2025-10-13 10:51:44,504 | INFO     | will abort loop
[2025-10-13 12:52:18] 2025-10-13 10:51:44,574 | INFO     | all job control threads have been joined
[2025-10-13 12:52:18] 2025-10-13 10:51:45,207 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,218 | INFO     | [data] control thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,284 | INFO     | all payload control threads have been joined
[2025-10-13 12:52:18] 2025-10-13 10:51:45,409 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,510 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,579 | INFO     | [job] control thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:45,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:52:18] 2025-10-13 10:51:46,029 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,070 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,212 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,259 | INFO     | [job] validate thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,290 | INFO     | [payload] control thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,445 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,664 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:46,888 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:51:48,211 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:52:18] 2025-10-13 10:52:06,723 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:52:18] 2025-10-13 10:52:07,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015968823104)>', '<ExcThread(monitor, started 140015741482752)>']
[2025-10-13 12:52:18] 2025-10-13 10:52:12,724 | INFO     | PID=5894 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 12:52:18] 2025-10-13 10:52:12,724 | INFO     | .. there are 9 such processes running
[2025-10-13 12:52:18] 2025-10-13 10:52:12,725 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:52:18] 2025-10-13 10:52:12,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:52:18] 2025-10-13 10:52:12,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:52:18] 2025-10-13 10:52:12,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:52:18] 2025-10-13 10:52:12,726 | INFO     | [monitor] control thread has ended
[2025-10-13 12:52:18] 2025-10-13 10:52:12,756 | INFO     | all workflow threads have been joined
[2025-10-13 12:52:18] 2025-10-13 10:52:12,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:52:18] 2025-10-13 10:52:12,756 | INFO     | traces error code: 0
[2025-10-13 12:52:18] 2025-10-13 10:52:12,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:52:18] 2025-10-13 10:52:13,234 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:52:18] 2025-10-13 10:52:13,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:52:18] 2025-10-13 10:52:13,424 [wrapper] pilotpid: 5894
[2025-10-13 12:52:18] 2025-10-13 10:52:13,528 [wrapper] Pilot exit status: 0
[2025-10-13 12:52:18] 2025-10-13 10:52:13,909 [wrapper] pandaids: 6840713053
[2025-10-13 12:52:18] 2025-10-13 10:52:14,829 [wrapper] cleanup supervisor_pilot 22046 5895
[2025-10-13 12:52:18] 2025-10-13 10:52:14,920 [wrapper] Test setup, not cleaning
[2025-10-13 12:52:18] 2025-10-13 10:52:15,024 [wrapper] apfmon messages muted
[2025-10-13 12:52:18] 2025-10-13 10:52:15,127 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:52:18] 2025-10-13 10:52:15,238 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:52:18]  *** Error codes and diagnostics ***
[2025-10-13 12:52:18]     "exeErrorCode": 0,
[2025-10-13 12:52:18]     "exeErrorDiag": "",
[2025-10-13 12:52:18]     "pilotErrorCode": 0,
[2025-10-13 12:52:18]     "pilotErrorDiag": "",
[2025-10-13 12:52:18]  *** Listing of results directory ***
[2025-10-13 12:52:18] total 420636
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc      5112 Oct 12 21:31 queuedata.json
[2025-10-13 12:52:18] -rwx------. 1 boinc boinc     36292 Oct 12 21:31 runpilot2-wrapper.sh
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc       100 Oct 13 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:52:18] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 08:27 run_atlas
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc       105 Oct 13 08:27 job.xml
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc 221789586 Oct 13 08:27 EVNT.46676267._004457.pool.root.1
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc      6390 Oct 13 08:27 init_data.xml
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:27 start_atlas.sh
[2025-10-13 12:52:18] drwxrwx--x. 2 boinc boinc        68 Oct 13 08:27 shared
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc    569680 Oct 13 08:27 input.tar.gz
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc         0 Oct 13 08:27 boinc_lockfile
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc      2549 Oct 13 08:27 pandaJob.out
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc    973230 Oct 13 08:30 agis_schedconf.cvmfs.json
[2025-10-13 12:52:18] drwx------. 5 boinc boinc      4096 Oct 13 08:30 pilot3
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc 199931330 Oct 13 12:49 HITS.46676269._087566.pool.root.1
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc       531 Oct 13 12:49 boinc_task_state.xml
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc      1019 Oct 13 12:50 memory_monitor_summary.json
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc   1560580 Oct 13 12:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc    470089 Oct 13 12:50 log.46676269._087566.job.log.tgz.1
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc      7779 Oct 13 12:51 heartbeat.json
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc        28 Oct 13 12:52 wrapper_checkpoint.txt
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc      8192 Oct 13 12:52 boinc_mmap_file
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc        95 Oct 13 12:52 pilot_heartbeat.json
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc      5069 Oct 13 12:52 pilotlog.txt
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc   2096023 Oct 13 12:52 log.46676269._087566.job.log.1
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc       357 Oct 13 12:52 output.list
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc       620 Oct 13 12:52 runtime_log
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc   2580480 Oct 13 12:52 result.tar.gz
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc       657 Oct 13 12:52 zZiLDmFyGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLpUMDmifuoVn.diag
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc      8703 Oct 13 12:52 runtime_log.err
[2025-10-13 12:52:18] -rw-r--r--. 1 boinc boinc     20620 Oct 13 12:52 stderr.txt
[2025-10-13 12:52:18] HITS file was successfully produced:
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc 199931330 Oct 13 12:49 shared/HITS.pool.root.1
[2025-10-13 12:52:18]  *** Contents of shared directory: ***
[2025-10-13 12:52:18] total 414936
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc 221789586 Oct 13 08:27 ATLAS.root_0
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:27 start_atlas.sh
[2025-10-13 12:52:18] -rw-r--r--. 2 boinc boinc    569680 Oct 13 08:27 input.tar.gz
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc 199931330 Oct 13 12:49 HITS.pool.root.1
[2025-10-13 12:52:18] -rw-------. 1 boinc boinc   2580480 Oct 13 12:52 result.tar.gz
12:52:19 (2143): run_atlas exited; CPU time 57268.181648
12:52:19 (2143): called boinc_finish(0)

</stderr_txt>
]]>

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