Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:38 (32195): wrapper (7.7.26015): starting
17:08:38 (32195): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:08:38] Arguments: --nthreads 12
[2025-10-12 17:08:38] Threads: 12
[2025-10-12 17:08:38] Checking for CVMFS
[2025-10-12 17:08:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:08:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:08:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:08:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:08:38] 2.11.2.0 6893 53315 87056 151636 2 59 12872627 20275200 1 130560 0 29898011 99.956 2523534 27948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:08:38] CVMFS is ok
[2025-10-12 17:08:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:08:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:08:38] Further information can be found at the LHC@home message board.
[2025-10-12 17:08:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:08:38] Checking for apptainer binary...
[2025-10-12 17:08:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:08:38] Running /usr/bin/apptainer --version
[2025-10-12 17:08:38] apptainer version 1.3.2-1.el7
[2025-10-12 17:08:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:08:40] c-205-3.aglt2.org
[2025-10-12 17:08:40] apptainer works
[2025-10-12 17:08:40] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:08:40] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:08:40] Starting ATLAS job with PandaID=6840428551
[2025-10-12 17:08:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:21:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:21:22]  scope=mc23_13p6TeV
[2025-10-12 18:21:22]  status=None
[2025-10-12 18:21:22]  status_code=0
[2025-10-12 18:21:22]  storage_token=
[2025-10-12 18:21:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840428551/log.46676269._084153.job.log.tgz.1
[2025-10-12 18:21:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/53/log.46676269._084153.job.log.tgz.1
[2025-10-12 18:21:22]  workdir=None
[2025-10-12 18:21:22] ]
[2025-10-12 18:21:22] 2025-10-12 22:20:43,488 | INFO     | transferring file log.46676269._084153.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840428551/log.46676269._084153.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 18:21:22] 2025-10-12 22:20:43,489 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840428551/log.46676269._084153.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._084153.job
[2025-10-12 18:21:22] 2025-10-12 22:20:43,523 | INFO     | adding to output.list: log.46676269._084153.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/53/log.46676269._084153.job.log.tg
[2025-10-12 18:21:22] 2025-10-12 22:20:43,524 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:21:22] 2025-10-12 22:20:43,525 | INFO     | summary of transferred files:
[2025-10-12 18:21:22] 2025-10-12 22:20:43,525 | INFO     |  -- lfn=log.46676269._084153.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:21:22] 2025-10-12 22:20:43,525 | INFO     | stage-out finished correctly
[2025-10-12 18:21:22] 2025-10-12 22:20:44,248 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:21:22] 2025-10-12 22:20:44,617 | INFO     | time since job start (4309s) is within the limit (172800.0s)
[2025-10-12 18:21:22] 2025-10-12 22:20:45,140 | INFO     | job 6840428551 has state=finished
[2025-10-12 18:21:22] 2025-10-12 22:20:45,141 | INFO     | preparing for final server update for job 6840428551 in state='finished'
[2025-10-12 18:21:22] 2025-10-12 22:20:45,141 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:21:22] 2025-10-12 22:20:45,141 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:21:22] 2025-10-12 22:20:45,142 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:21:22] 2025-10-12 22:20:45,142 | INFO     | job 6840428551 has finished - writing final server update
[2025-10-12 18:21:22] 2025-10-12 22:20:45,142 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:21:22] 2025-10-12 22:20:45,143 | INFO     | executing command: lscpu
[2025-10-12 18:21:22] 2025-10-12 22:20:45,170 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:21:22] 2025-10-12 22:20:46,622 | INFO     | time since job start (4311s) is within the limit (172800.0s)
[2025-10-12 18:21:22] 2025-10-12 22:20:47,198 | WARNING  | process 10231 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 18:21:22] 2025-10-12 22:20:47,198 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840428551/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:21:22] 2025-10-12 22:20:47,287 | INFO     | number of running child processes to parent process 10231: 1
[2025-10-12 18:21:22] 2025-10-12 22:20:47,287 | INFO     | maximum number of monitored processes: 6
[2025-10-12 18:21:22] 2025-10-12 22:20:48,625 | INFO     | time since job start (4313s) is within the limit (172800.0s)
[2025-10-12 18:21:22] 2025-10-12 22:20:49,790 | INFO     | monitor loop #321: job 0:6840428551 is in state 'finished'
[2025-10-12 18:21:22] 2025-10-12 22:20:49,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,037 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 18:21:22] 2025-10-12 22:20:50,040 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 18:21:22] 2025-10-12 22:20:50,043 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840428551/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,043 | INFO     | extracted standard info from prmon json
[2025-10-12 18:21:22] 2025-10-12 22:20:50,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:21:22] 2025-10-12 22:20:50,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:21:22] 2025-10-12 22:20:50,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:21:22] 2025-10-12 22:20:50,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:21:22] 2025-10-12 22:20:50,045 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | sum of deviations: 216916.0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | mean x: 1760305590.5
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | mean y: 2673682.0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | -- intersect: -2024905.8519020602
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | intersect: -2024905.8519020602
[2025-10-12 18:21:22] 2025-10-12 22:20:50,046 | INFO     | chi2: 0.016844427913406346
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | -- intersect: -2024905.8519020602
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | current memory leak: 0.00 B/s (using 64 data points, chi2=0.02)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | ..............................
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | . Timing measurements:
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | . get job = 0 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,047 | INFO     | . initial setup = 2 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | . payload setup = 7 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | . stage-in = 0 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | . payload execution = 4282 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | . stage-out = 0 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | . log creation = 0 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,048 | INFO     | ..............................
[2025-10-12 18:21:22] 2025-10-12 22:20:50,257 | INFO     | 
[2025-10-12 18:21:22] 2025-10-12 22:20:50,257 | INFO     | job summary report
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | --------------------------------------------------
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | PanDA job id: 6840428551
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | task id: 46676269
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | errors: (none)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:21:22] 2025-10-12 22:20:50,258 | INFO     | pilot state: finished 
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | transexitcode: 0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | exeerrorcode: 0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | exeerrordiag: 
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | exitcode: 0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | exitmsg: OK
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | cpuconsumptiontime: 45860 s
[2025-10-12 18:21:22] 2025-10-12 22:20:50,259 | INFO     | nevents: 400
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | neventsw: 0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | pid: 10231
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | pgrp: 10231
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | corecount: 12
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | event service: False
[2025-10-12 18:21:22] 2025-10-12 22:20:50,260 | INFO     | sizes: {0: 2348027, 1: 2348883, 6: 2349145, 12: 2349173, 4289: 2375221, 4290: 2375220, 4292: 2384458, 4298: 2384596}
[2025-10-12 18:21:22] 2025-10-12 22:20:50,261 | INFO     | --------------------------------------------------
[2025-10-12 18:21:22] 2025-10-12 22:20:50,261 | INFO     | 
[2025-10-12 18:21:22] 2025-10-12 22:20:50,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 18:21:22] 2025-10-12 22:20:50,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:21:22] 2025-10-12 22:20:50,287 | INFO     | job 6840428551 has completed (purged errors)
[2025-10-12 18:21:22] 2025-10-12 22:20:50,288 | INFO     | overall cleanup function is called
[2025-10-12 18:21:22] 2025-10-12 22:20:51,296 | INFO     | --- collectZombieJob: --- 10, [10231]
[2025-10-12 18:21:22] 2025-10-12 22:20:51,296 | INFO     | zombie collector waiting for pid 10231
[2025-10-12 18:21:22] 2025-10-12 22:20:51,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:21:22] 2025-10-12 22:20:51,296 | INFO     | collected zombie processes
[2025-10-12 18:21:22] 2025-10-12 22:20:51,297 | INFO     | will attempt to kill all subprocesses of pid=10231
[2025-10-12 18:21:22] 2025-10-12 22:20:51,386 | INFO     | process IDs to be killed: [10231] (in reverse order)
[2025-10-12 18:21:22] 2025-10-12 22:20:51,436 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:21:22] 2025-10-12 22:20:51,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:21:22] 2025-10-12 22:20:51,440 | INFO     | did not find any defunct processes belonging to 10231
[2025-10-12 18:21:22] 2025-10-12 22:20:51,443 | INFO     | did not find any defunct processes belonging to 10231
[2025-10-12 18:21:22] 2025-10-12 22:20:51,443 | INFO     | ready for new job
[2025-10-12 18:21:22] 2025-10-12 22:20:51,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:21:22] 2025-10-12 22:20:51,444 | INFO     | ***************************************
[2025-10-12 18:21:22] 2025-10-12 22:20:51,444 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:21:22] 2025-10-12 22:20:51,444 | INFO     | ***************************************
[2025-10-12 18:21:22] 2025-10-12 22:20:51,444 | INFO     | 
[2025-10-12 18:21:22] 2025-10-12 22:20:51,445 | INFO     | architecture information:
[2025-10-12 18:21:22] 2025-10-12 22:20:51,446 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:21:22] 2025-10-12 22:20:51,459 | INFO     | cat /etc/os-release:
[2025-10-12 18:21:22] NAME="CentOS Linux"
[2025-10-12 18:21:22] VERSION="7 (Core)"
[2025-10-12 18:21:22] ID="centos"
[2025-10-12 18:21:22] ID_LIKE="rhel fedora"
[2025-10-12 18:21:22] VERSION_ID="7"
[2025-10-12 18:21:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:21:22] ANSI_COLOR="0;31"
[2025-10-12 18:21:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:21:22] HOME_URL="https://www.centos.org/"
[2025-10-12 18:21:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:21:22] 
[2025-10-12 18:21:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:21:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:21:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:21:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:21:22] 
[2025-10-12 18:21:22] 2025-10-12 22:20:51,460 | INFO     | ***************************************
[2025-10-12 18:21:22] 2025-10-12 22:20:51,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 18:21:22] 2025-10-12 22:20:51,980 | INFO     | sufficient remaining disk space (29492248576 B)
[2025-10-12 18:21:22] 2025-10-12 22:20:51,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:21:22] 2025-10-12 22:20:51,980 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:21:22] 2025-10-12 22:20:51,980 | INFO     | update_server=False
[2025-10-12 18:21:22] 2025-10-12 22:20:51,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:21:22] 2025-10-12 22:20:51,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:21:22] 2025-10-12 22:20:51,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:21:22] 2025-10-12 22:20:52,293 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:21:22] 2025-10-12 22:20:52,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:21:22] 2025-10-12 22:20:52,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:21:22] 2025-10-12 22:20:52,293 | INFO     | will abort loop
[2025-10-12 18:21:22] 2025-10-12 22:20:52,493 | INFO     | all payload control threads have been joined
[2025-10-12 18:21:22] 2025-10-12 22:20:52,678 | INFO     | all data control threads have been joined
[2025-10-12 18:21:22] 2025-10-12 22:20:52,800 | INFO     | all job control threads have been joined
[2025-10-12 18:21:22] 2025-10-12 22:20:52,986 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:52,987 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,148 | INFO     | [job] validate thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,266 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,298 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,487 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,493 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,499 | INFO     | [payload] control thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,683 | INFO     | [data] control thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,708 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,805 | INFO     | [job] control thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,967 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,987 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:53,991 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:20:54,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:21:22] 2025-10-12 22:20:58,844 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:21:01,715 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:21:22] 2025-10-12 22:21:02,580 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:21:22] 2025-10-12 22:21:03,585 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:21:22] 2025-10-12 22:21:03,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324767672128)>', '<ExcThread(monitor, started 140324466833152)>']
[2025-10-12 18:21:22] 2025-10-12 22:21:08,997 | INFO     | all workflow threads have been joined
[2025-10-12 18:21:22] 2025-10-12 22:21:08,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:21:22] 2025-10-12 22:21:08,997 | INFO     | traces error code: 0
[2025-10-12 18:21:22] 2025-10-12 22:21:09,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:21:22] 2025-10-12 22:21:21,827 | INFO     | PID=3720 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:21:22] 2025-10-12 22:21:21,829 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:21:22] 2025-10-12 22:21:21,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:21:22] 2025-10-12 22:21:21,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:21:22] 2025-10-12 22:21:21,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:21:22] 2025-10-12 22:21:21,829 | INFO     | [monitor] control thread has ended
[2025-10-12 18:21:22] 2025-10-12 22:21:21,920 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:21:22] 2025-10-12 22:21:21,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:21:22] 2025-10-12 22:21:21,928 [wrapper] pilotpid: 3720
[2025-10-12 18:21:22] 2025-10-12 22:21:21,932 [wrapper] Pilot exit status: 0
[2025-10-12 18:21:22] 2025-10-12 22:21:21,948 [wrapper] pandaids: 6840428551
[2025-10-12 18:21:22] 2025-10-12 22:21:21,986 [wrapper] cleanup supervisor_pilot 28789 3721
[2025-10-12 18:21:22] 2025-10-12 22:21:21,990 [wrapper] Test setup, not cleaning
[2025-10-12 18:21:22] 2025-10-12 22:21:21,994 [wrapper] apfmon messages muted
[2025-10-12 18:21:22] 2025-10-12 22:21:21,997 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:21:22] 2025-10-12 22:21:22,001 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:21:22]  *** Error codes and diagnostics ***
[2025-10-12 18:21:22]     "exeErrorCode": 0,
[2025-10-12 18:21:22]     "exeErrorDiag": "",
[2025-10-12 18:21:22]     "pilotErrorCode": 0,
[2025-10-12 18:21:22]     "pilotErrorDiag": "",
[2025-10-12 18:21:22]  *** Listing of results directory ***
[2025-10-12 18:21:22] total 411460
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 18:21:22] -rwx------ 1 boincer umatlas     36292 Oct 12 12:54 runpilot2-wrapper.sh
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:54 queuedata.json
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:21:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 17:08 run_atlas
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 17:08 job.xml
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas 219577043 Oct 12 17:08 EVNT.46676267._004791.pool.root.1
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 17:08 input.tar.gz
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:08 start_atlas.sh
[2025-10-12 18:21:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 17:08 shared
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 17:08 boinc_lockfile
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 17:08 pandaJob.out
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas    975536 Oct 12 17:08 agis_schedconf.cvmfs.json
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas   1560580 Oct 12 17:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:21:22] drwx------ 5 boincer umatlas      4096 Oct 12 17:08 pilot3
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 18:18 init_data.xml
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas 195864127 Oct 12 18:20 HITS.46676269._084153.pool.root.1
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas       530 Oct 12 18:20 boinc_task_state.xml
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas      1050 Oct 12 18:20 memory_monitor_summary.json
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas    369462 Oct 12 18:20 log.46676269._084153.job.log.tgz.1
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas      7843 Oct 12 18:20 heartbeat.json
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 18:21 boinc_mmap_file
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas        27 Oct 12 18:21 wrapper_checkpoint.txt
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas        95 Oct 12 18:21 pilot_heartbeat.json
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas       744 Oct 12 18:21 pilotlog.txt
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas    627968 Oct 12 18:21 log.46676269._084153.job.log.1
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas       357 Oct 12 18:21 output.list
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 18:21 runtime_log
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas   1013760 Oct 12 18:21 result.tar.gz
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 18:21 runtime_log.err
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas       658 Oct 12 18:21 FdANDmMWES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9jkNDmgsPl0m.diag
[2025-10-12 18:21:22] -rw-r--r-- 1 boincer umatlas     21875 Oct 12 18:21 stderr.txt
[2025-10-12 18:21:22] HITS file was successfully produced:
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas 195864127 Oct 12 18:20 shared/HITS.pool.root.1
[2025-10-12 18:21:22]  *** Contents of shared directory: ***
[2025-10-12 18:21:22] total 407280
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas 219577043 Oct 12 17:08 ATLAS.root_0
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 17:08 input.tar.gz
[2025-10-12 18:21:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 17:08 start_atlas.sh
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas 195864127 Oct 12 18:20 HITS.pool.root.1
[2025-10-12 18:21:22] -rw------- 1 boincer umatlas   1013760 Oct 12 18:21 result.tar.gz
18:21:23 (32195): run_atlas exited; CPU time 45836.932982
18:21:23 (32195): called boinc_finish(0)

</stderr_txt>
]]>

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