Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:59:12 (37379): wrapper (7.7.26015): starting
16:59:12 (37379): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:59:12] Arguments: --nthreads 8
[2025-10-12 16:59:12] Threads: 8
[2025-10-12 16:59:12] Checking for CVMFS
[2025-10-12 16:59:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:59:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:59:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:59:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:59:13] 2.11.2.0 13817 481070 275168 151636 2 59 9889190 18432001 2749 130560 8 209752236 99.520 263798998 24851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 16:59:13] CVMFS is ok
[2025-10-12 16:59:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:59:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:59:13] Further information can be found at the LHC@home message board.
[2025-10-12 16:59:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:59:13] Checking for apptainer binary...
[2025-10-12 16:59:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:59:13] Running /usr/bin/apptainer --version
[2025-10-12 16:59:13] apptainer version 1.3.2-1.el7
[2025-10-12 16:59:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:59:13] c-9-29.aglt2.org
[2025-10-12 16:59:13] apptainer works
[2025-10-12 16:59:13] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:59:13] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:59:13] Starting ATLAS job with PandaID=6840429388
[2025-10-12 16:59:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:47:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:47:46] 2025-10-12 23:46:49,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:47:46] 2025-10-12 23:46:49,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:47:46] 2025-10-12 23:46:49,548 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:47:46] 2025-10-12 23:46:49,548 | INFO     | sum of square deviations: 1392881930.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | sum of deviations: 7373487544.999994
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | mean x: 1760307791.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | mean y: 2454666.812121212
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | -- intersect: -9316072117.654783
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | intersect: -9316072117.654783
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | chi2: 2.282842878699828
[2025-10-12 19:47:46] 2025-10-12 23:46:49,549 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,550 | INFO     | sum of deviations: 17817232092.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,550 | INFO     | mean x: 1760307638.5
[2025-10-12 19:47:46] 2025-10-12 23:46:49,550 | INFO     | mean y: 2467303.4375
[2025-10-12 19:47:46] 2025-10-12 23:46:49,550 | INFO     | -- intersect: -24692440198.813618
[2025-10-12 19:47:46] 2025-10-12 23:46:49,550 | INFO     | intersect: -24692440198.813618
[2025-10-12 19:47:46] 2025-10-12 23:46:49,551 | INFO     | chi2: 1.5144597970543634
[2025-10-12 19:47:46] 2025-10-12 23:46:49,551 | INFO     | current chi2=1.5144597970543634 (change=33.65904367816545 %)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,551 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,552 | INFO     | sum of deviations: 17243519954.999996
[2025-10-12 19:47:46] 2025-10-12 23:46:49,552 | INFO     | mean x: 1760307486.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,553 | INFO     | mean y: 2466544.9612903227
[2025-10-12 19:47:46] 2025-10-12 23:46:49,553 | INFO     | -- intersect: -26285622581.347794
[2025-10-12 19:47:46] 2025-10-12 23:46:49,553 | INFO     | intersect: -26285622581.347794
[2025-10-12 19:47:46] 2025-10-12 23:46:49,553 | INFO     | chi2: 1.5161142911335137
[2025-10-12 19:47:46] 2025-10-12 23:46:49,553 | INFO     | current chi2=1.5161142911335137 (change=-0.10924648395211997 %)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,554 | INFO     | right removable region: 154
[2025-10-12 19:47:46] 2025-10-12 23:46:49,554 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,555 | INFO     | sum of deviations: -16597502596.5
[2025-10-12 19:47:46] 2025-10-12 23:46:49,555 | INFO     | mean x: 1760307943.5
[2025-10-12 19:47:46] 2025-10-12 23:46:49,556 | INFO     | mean y: 2483990.61875
[2025-10-12 19:47:46] 2025-10-12 23:46:49,556 | INFO     | -- intersect: 23006835075.534275
[2025-10-12 19:47:46] 2025-10-12 23:46:49,556 | INFO     | intersect: 23006835075.534275
[2025-10-12 19:47:46] 2025-10-12 23:46:49,556 | INFO     | chi2: 0.8569390739904974
[2025-10-12 19:47:46] 2025-10-12 23:46:49,556 | INFO     | current chi2=0.8569390739904974 (change=62.461758450999525 %)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,557 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,558 | INFO     | sum of deviations: -12752448756.999996
[2025-10-12 19:47:46] 2025-10-12 23:46:49,558 | INFO     | mean x: 1760308096.0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,558 | INFO     | mean y: 2478854.212903226
[2025-10-12 19:47:46] 2025-10-12 23:46:49,558 | INFO     | -- intersect: 19443847353.657585
[2025-10-12 19:47:46] 2025-10-12 23:46:49,559 | INFO     | intersect: 19443847353.657585
[2025-10-12 19:47:46] 2025-10-12 23:46:49,559 | INFO     | chi2: 0.8337377505193044
[2025-10-12 19:47:46] 2025-10-12 23:46:49,559 | INFO     | current chi2=0.8337377505193044 (change=2.7074647632942748 %)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,559 | INFO     | left removable region: 20
[2025-10-12 19:47:46] 2025-10-12 23:46:49,560 | INFO     | sum of square deviations: 746051197.5
[2025-10-12 19:47:46] 2025-10-12 23:46:49,560 | INFO     | sum of deviations: 1141968891.4999998
[2025-10-12 19:47:46] 2025-10-12 23:46:49,561 | INFO     | mean x: 1760308065.5
[2025-10-12 19:47:46] 2025-10-12 23:46:49,561 | INFO     | mean y: 2487736.1119402987
[2025-10-12 19:47:46] 2025-10-12 23:46:49,561 | INFO     | -- intersect: -2691988269.011748
[2025-10-12 19:47:46] 2025-10-12 23:46:49,561 | INFO     | intersect: -2691988269.011748
[2025-10-12 19:47:46] 2025-10-12 23:46:49,561 | INFO     | chi2: 0.0002086917554442688
[2025-10-12 19:47:46] 2025-10-12 23:46:49,562 | INFO     | -- intersect: -2691988269.011748
[2025-10-12 19:47:46] 2025-10-12 23:46:49,562 | INFO     | current memory leak: 1.53 B/s (using 134 data points, chi2=0.00)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,562 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | ..............................
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | . Timing measurements:
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | . get job = 0 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | . initial setup = 2 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | . payload setup = 4 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,563 | INFO     | . stage-in = 0 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,564 | INFO     | . payload execution = 10015 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,564 | INFO     | . stage-out = 0 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,564 | INFO     | . log creation = 0 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,564 | INFO     | ..............................
[2025-10-12 19:47:46] 2025-10-12 23:46:49,715 | INFO     | 
[2025-10-12 19:47:46] 2025-10-12 23:46:49,715 | INFO     | job summary report
[2025-10-12 19:47:46] 2025-10-12 23:46:49,715 | INFO     | --------------------------------------------------
[2025-10-12 19:47:46] 2025-10-12 23:46:49,715 | INFO     | PanDA job id: 6840429388
[2025-10-12 19:47:46] 2025-10-12 23:46:49,715 | INFO     | task id: 46676269
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | errors: (none)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | pilot state: finished 
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | transexitcode: 0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | exeerrorcode: 0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,716 | INFO     | exeerrordiag: 
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | exitcode: 0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | exitmsg: OK
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | cpuconsumptiontime: 75855 s
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | nevents: 400
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | neventsw: 0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | pid: 730
[2025-10-12 19:47:46] 2025-10-12 23:46:49,717 | INFO     | pgrp: 730
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | corecount: 8
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | event service: False
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10023: 2377794, 10024: 2377793, 10025: 2386975, 10027: 2387031, 10030: 2387289}
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | --------------------------------------------------
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | 
[2025-10-12 19:47:46] 2025-10-12 23:46:49,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 19:47:46] 2025-10-12 23:46:49,742 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,743 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,743 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,743 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:47:46] 2025-10-12 23:46:49,746 | INFO     | job 6840429388 has completed (purged errors)
[2025-10-12 19:47:46] 2025-10-12 23:46:49,747 | INFO     | overall cleanup function is called
[2025-10-12 19:47:46] 2025-10-12 23:46:50,754 | INFO     | --- collectZombieJob: --- 10, [730]
[2025-10-12 19:47:46] 2025-10-12 23:46:50,754 | INFO     | zombie collector waiting for pid 730
[2025-10-12 19:47:46] 2025-10-12 23:46:50,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:47:46] 2025-10-12 23:46:50,755 | INFO     | collected zombie processes
[2025-10-12 19:47:46] 2025-10-12 23:46:50,755 | INFO     | will attempt to kill all subprocesses of pid=730
[2025-10-12 19:47:46] 2025-10-12 23:46:50,960 | INFO     | process IDs to be killed: [730] (in reverse order)
[2025-10-12 19:47:46] 2025-10-12 23:46:51,021 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:47:46] 2025-10-12 23:46:51,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:47:46] 2025-10-12 23:46:51,025 | INFO     | did not find any defunct processes belonging to 730
[2025-10-12 19:47:46] 2025-10-12 23:46:51,028 | INFO     | did not find any defunct processes belonging to 730
[2025-10-12 19:47:46] 2025-10-12 23:46:51,029 | INFO     | ready for new job
[2025-10-12 19:47:46] 2025-10-12 23:46:51,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:47:46] 2025-10-12 23:46:51,030 | INFO     | ***************************************
[2025-10-12 19:47:46] 2025-10-12 23:46:51,030 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:47:46] 2025-10-12 23:46:51,030 | INFO     | ***************************************
[2025-10-12 19:47:46] 2025-10-12 23:46:51,030 | INFO     | 
[2025-10-12 19:47:46] 2025-10-12 23:46:51,031 | INFO     | architecture information:
[2025-10-12 19:47:46] 2025-10-12 23:46:51,032 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:47:46] 2025-10-12 23:46:51,041 | INFO     | cat /etc/os-release:
[2025-10-12 19:47:46] NAME="CentOS Linux"
[2025-10-12 19:47:46] VERSION="7 (Core)"
[2025-10-12 19:47:46] ID="centos"
[2025-10-12 19:47:46] ID_LIKE="rhel fedora"
[2025-10-12 19:47:46] VERSION_ID="7"
[2025-10-12 19:47:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:47:46] ANSI_COLOR="0;31"
[2025-10-12 19:47:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:47:46] HOME_URL="https://www.centos.org/"
[2025-10-12 19:47:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:47:46] 
[2025-10-12 19:47:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:47:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:47:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:47:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:47:46] 
[2025-10-12 19:47:46] 2025-10-12 23:46:51,041 | INFO     | ***************************************
[2025-10-12 19:47:46] 2025-10-12 23:46:51,544 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 19:47:46] 2025-10-12 23:46:51,559 | INFO     | sufficient remaining disk space (104785248256 B)
[2025-10-12 19:47:46] 2025-10-12 23:46:51,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:47:46] 2025-10-12 23:46:51,560 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:47:46] 2025-10-12 23:46:51,560 | INFO     | update_server=False
[2025-10-12 19:47:46] 2025-10-12 23:46:51,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:47:46] 2025-10-12 23:46:51,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:47:46] 2025-10-12 23:46:51,690 | INFO     | all data control threads have been joined
[2025-10-12 19:47:46] 2025-10-12 23:46:51,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:47:46] 2025-10-12 23:46:51,768 | INFO     | aborting loop
[2025-10-12 19:47:46] 2025-10-12 23:46:51,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:47:46] 2025-10-12 23:46:52,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:47:46] 2025-10-12 23:46:52,248 | INFO     | all job control threads have been joined
[2025-10-12 19:47:46] 2025-10-12 23:46:52,565 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,567 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,571 | INFO     | [job] validate thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,695 | INFO     | [data] control thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,773 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,789 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:52,893 | INFO     | all payload control threads have been joined
[2025-10-12 19:47:46] 2025-10-12 23:46:53,023 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,048 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,254 | INFO     | [job] control thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,290 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,310 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,523 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,857 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:53,899 | INFO     | [payload] control thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:46:56,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:47:01,737 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:47:46] 2025-10-12 23:47:02,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:47:46] 2025-10-12 23:47:22,488 | INFO     | PID=41058 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 19:47:46] 2025-10-12 23:47:22,488 | INFO     | .. there are 4 such processes running
[2025-10-12 19:47:46] 2025-10-12 23:47:22,489 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:47:46] 2025-10-12 23:47:22,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:47:46] 2025-10-12 23:47:22,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:47:46] 2025-10-12 23:47:40,807 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:47:46] 2025-10-12 23:47:41,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718742157120)>', '<ExcThread(monitor, started 139718155032320)>']
[2025-10-12 19:47:46] 2025-10-12 23:47:41,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:47:46] 2025-10-12 23:47:41,586 | INFO     | [monitor] control thread has ended
[2025-10-12 19:47:46] 2025-10-12 23:47:46,104 | INFO     | all workflow threads have been joined
[2025-10-12 19:47:46] 2025-10-12 23:47:46,104 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:47:46] 2025-10-12 23:47:46,104 | INFO     | traces error code: 0
[2025-10-12 19:47:46] 2025-10-12 23:47:46,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:47:46] 2025-10-12 23:47:46,191 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:47:46] 2025-10-12 23:47:46,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:47:46] 2025-10-12 23:47:46,195 [wrapper] pilotpid: 41058
[2025-10-12 19:47:46] 2025-10-12 23:47:46,213 [wrapper] Pilot exit status: 0
[2025-10-12 19:47:46] 2025-10-12 23:47:46,221 [wrapper] pandaids: 6840429388
[2025-10-12 19:47:46] 2025-10-12 23:47:46,254 [wrapper] cleanup supervisor_pilot  3982 41059
[2025-10-12 19:47:46] 2025-10-12 23:47:46,256 [wrapper] Test setup, not cleaning
[2025-10-12 19:47:46] 2025-10-12 23:47:46,258 [wrapper] apfmon messages muted
[2025-10-12 19:47:46] 2025-10-12 23:47:46,261 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:47:46] 2025-10-12 23:47:46,263 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:47:46]  *** Error codes and diagnostics ***
[2025-10-12 19:47:46]     "exeErrorCode": 0,
[2025-10-12 19:47:46]     "exeErrorDiag": "",
[2025-10-12 19:47:46]     "pilotErrorCode": 0,
[2025-10-12 19:47:46]     "pilotErrorDiag": "",
[2025-10-12 19:47:46]  *** Listing of results directory ***
[2025-10-12 19:47:46] total 416908
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:24 queuedata.json
[2025-10-12 19:47:46] -rwx------ 1 boincer umatlas     36292 Oct 12 13:24 runpilot2-wrapper.sh
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:47:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:59 run_atlas
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:59 job.xml
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas 221045243 Oct 12 16:59 EVNT.46676267._004814.pool.root.1
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:59 start_atlas.sh
[2025-10-12 19:47:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:59 shared
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 16:59 input.tar.gz
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:59 boinc_lockfile
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:59 pandaJob.out
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas    975536 Oct 12 16:59 agis_schedconf.cvmfs.json
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas   1560580 Oct 12 16:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:47:46] drwx------ 5 boincer umatlas      4096 Oct 12 16:59 pilot3
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas 198331769 Oct 12 19:46 HITS.46676269._084734.pool.root.1
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas       530 Oct 12 19:46 boinc_task_state.xml
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas      6036 Oct 12 19:46 init_data.xml
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas        95 Oct 12 19:46 pilot_heartbeat.json
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas      1046 Oct 12 19:46 memory_monitor_summary.json
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas    407145 Oct 12 19:46 log.46676269._084734.job.log.tgz.1
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas      7829 Oct 12 19:46 heartbeat.json
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 19:47 boinc_mmap_file
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas        28 Oct 12 19:47 wrapper_checkpoint.txt
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas      4894 Oct 12 19:47 pilotlog.txt
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas   1405178 Oct 12 19:47 log.46676269._084734.job.log.1
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas       357 Oct 12 19:47 output.list
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 19:47 runtime_log
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas   1832960 Oct 12 19:47 result.tar.gz
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas      8694 Oct 12 19:47 runtime_log.err
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas       659 Oct 12 19:47 672KDmRzES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2skNDmLDajSm.diag
[2025-10-12 19:47:46] -rw-r--r-- 1 boincer umatlas     20872 Oct 12 19:47 stderr.txt
[2025-10-12 19:47:46] HITS file was successfully produced:
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas 198331769 Oct 12 19:46 shared/HITS.pool.root.1
[2025-10-12 19:47:46]  *** Contents of shared directory: ***
[2025-10-12 19:47:46] total 411928
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas 221045243 Oct 12 16:59 ATLAS.root_0
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:59 start_atlas.sh
[2025-10-12 19:47:46] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 16:59 input.tar.gz
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas 198331769 Oct 12 19:46 HITS.pool.root.1
[2025-10-12 19:47:46] -rw------- 1 boincer umatlas   1832960 Oct 12 19:47 result.tar.gz
19:47:48 (37379): run_atlas exited; CPU time 76087.874299
19:47:48 (37379): called boinc_finish(0)

</stderr_txt>
]]>

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