Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:58:37 (393290): wrapper (7.7.26015): starting
16:58:37 (393290): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:58:37] Arguments: --nthreads 8
[2025-10-12 16:58:37] Threads: 8
[2025-10-12 16:58:37] Checking for CVMFS
[2025-10-12 16:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:58:39] 2.13.2.0 169449 125515 551900 151636 0 840 22765307 32935936 37604 16776704 0 256543231 99.589 269176305 21009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:58:39] CVMFS is ok
[2025-10-12 16:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:58:39] Further information can be found at the LHC@home message board.
[2025-10-12 16:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:58:39] Checking for apptainer binary...
[2025-10-12 16:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:58:39] Running /usr/bin/apptainer --version
[2025-10-12 16:58:39] apptainer version 1.4.3-1.el9
[2025-10-12 16:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:58:40] c6-12-27-4.aglt2.org
[2025-10-12 16:58:40] apptainer works
[2025-10-12 16:58:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:58:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:58:40] Starting ATLAS job with PandaID=6840429838
[2025-10-12 16:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:48:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:48:29] 2025-10-13 01:47:33,118 | INFO     | -- intersect: -27607526653.524933
[2025-10-12 21:48:29] 2025-10-13 01:47:33,118 | INFO     | intersect: -27607526653.524933
[2025-10-12 21:48:29] 2025-10-13 01:47:33,141 | INFO     | chi2: 4.97362561464271
[2025-10-12 21:48:29] 2025-10-13 01:47:33,141 | INFO     | sum of square deviations: 6519339438.387695
[2025-10-12 21:48:29] 2025-10-13 01:47:33,144 | INFO     | sum of deviations: 120037869649.56873
[2025-10-12 21:48:29] 2025-10-13 01:47:33,172 | INFO     | mean x: 1760311312.786232
[2025-10-12 21:48:29] 2025-10-13 01:47:33,173 | INFO     | mean y: 2127666.518115942
[2025-10-12 21:48:29] 2025-10-13 01:47:33,173 | INFO     | -- intersect: -32409748092.34753
[2025-10-12 21:48:29] 2025-10-13 01:47:33,173 | INFO     | intersect: -32409748092.34753
[2025-10-12 21:48:29] 2025-10-13 01:47:33,174 | INFO     | chi2: 4.314565173005867
[2025-10-12 21:48:29] 2025-10-13 01:47:33,174 | INFO     | current chi2=4.314565173005867 (change=13.251106792126082 %)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,174 | INFO     | right removable region: 275
[2025-10-12 21:48:29] 2025-10-13 01:47:33,174 | INFO     | sum of square deviations: 6519307779.811575
[2025-10-12 21:48:29] 2025-10-13 01:47:33,181 | INFO     | sum of deviations: 38329398953.855125
[2025-10-12 21:48:29] 2025-10-13 01:47:33,181 | INFO     | mean x: 1760311617.789855
[2025-10-12 21:48:29] 2025-10-13 01:47:33,181 | INFO     | mean y: 2151987.8768115942
[2025-10-12 21:48:29] 2025-10-13 01:47:33,182 | INFO     | -- intersect: -10347364948.61665
[2025-10-12 21:48:29] 2025-10-13 01:47:33,182 | INFO     | intersect: -10347364948.61665
[2025-10-12 21:48:29] 2025-10-13 01:47:33,183 | INFO     | chi2: 1.7838986723022763
[2025-10-12 21:48:29] 2025-10-13 01:47:33,183 | INFO     | current chi2=1.7838986723022763 (change=64.13283165000698 %)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,184 | INFO     | sum of square deviations: 6171385189.549785
[2025-10-12 21:48:29] 2025-10-13 01:47:33,186 | INFO     | sum of deviations: 6905293606.535057
[2025-10-12 21:48:29] 2025-10-13 01:47:33,186 | INFO     | mean x: 1760311770.287823
[2025-10-12 21:48:29] 2025-10-13 01:47:33,186 | INFO     | mean y: 2165740.3136531366
[2025-10-12 21:48:29] 2025-10-13 01:47:33,186 | INFO     | -- intersect: -1967484385.1492946
[2025-10-12 21:48:29] 2025-10-13 01:47:33,213 | INFO     | intersect: -1967484385.1492946
[2025-10-12 21:48:29] 2025-10-13 01:47:33,214 | INFO     | chi2: 1.154166298717579
[2025-10-12 21:48:29] 2025-10-13 01:47:33,214 | INFO     | current chi2=1.154166298717579 (change=35.30090488670935 %)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,215 | INFO     | sum of square deviations: 5836067242.785736
[2025-10-12 21:48:29] 2025-10-13 01:47:33,217 | INFO     | sum of deviations: -15119835837.71429
[2025-10-12 21:48:29] 2025-10-13 01:47:33,252 | INFO     | mean x: 1760311922.7857144
[2025-10-12 21:48:29] 2025-10-13 01:47:33,252 | INFO     | mean y: 2175745.1804511277
[2025-10-12 21:48:29] 2025-10-13 01:47:33,252 | INFO     | -- intersect: 4562717320.261195
[2025-10-12 21:48:29] 2025-10-13 01:47:33,252 | INFO     | intersect: 4562717320.261195
[2025-10-12 21:48:29] 2025-10-13 01:47:33,261 | INFO     | chi2: 0.8396490021202123
[2025-10-12 21:48:29] 2025-10-13 01:47:33,262 | INFO     | current chi2=0.8396490021202123 (change=27.25060478258931 %)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,262 | INFO     | sum of square deviations: 5513121255.019191
[2025-10-12 21:48:29] 2025-10-13 01:47:33,264 | INFO     | sum of deviations: -24344949349.99617
[2025-10-12 21:48:29] 2025-10-13 01:47:33,264 | INFO     | mean x: 1760312075.283525
[2025-10-12 21:48:29] 2025-10-13 01:47:33,265 | INFO     | mean y: 2180074.256704981
[2025-10-12 21:48:29] 2025-10-13 01:47:33,265 | INFO     | -- intersect: 7775400783.659529
[2025-10-12 21:48:29] 2025-10-13 01:47:33,265 | INFO     | intersect: 7775400783.659529
[2025-10-12 21:48:29] 2025-10-13 01:47:33,265 | INFO     | chi2: 0.7507165582240606
[2025-10-12 21:48:29] 2025-10-13 01:47:33,292 | INFO     | current chi2=0.7507165582240606 (change=10.59162145987036 %)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,293 | INFO     | left removable region: 40
[2025-10-12 21:48:29] 2025-10-13 01:47:33,293 | INFO     | sum of square deviations: 4024214581.021263
[2025-10-12 21:48:29] 2025-10-13 01:47:33,302 | INFO     | sum of deviations: -5636780833.829786
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | mean x: 1760312502.2765958
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | mean y: 2183792.0127659575
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | -- intersect: 2467881277.7232676
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | intersect: 2467881277.7232676
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | chi2: 0.05912594515545633
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | -- intersect: 2467881277.7232676
[2025-10-12 21:48:29] 2025-10-13 01:47:33,305 | INFO     | current memory leak: -1.40 B/s (using 235 data points, chi2=0.06)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,306 | INFO     | could have reported an average CPU frequency of 2639 MHz (13 samples)
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | ..............................
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . Timing measurements:
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . get job = 0 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . initial setup = 6 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . payload setup = 41 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . stage-in = 0 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . payload execution = 17129 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . stage-out = 5 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | . log creation = 0 s
[2025-10-12 21:48:29] 2025-10-13 01:47:33,307 | INFO     | ..............................
[2025-10-12 21:48:29] 2025-10-13 01:47:34,339 | INFO     | 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,340 | INFO     | job summary report
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | --------------------------------------------------
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | PanDA job id: 6840429838
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | task id: 46676269
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | errors: (none)
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | pilot state: finished 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | transexitcode: 0
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | exeerrorcode: 0
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | exeerrordiag: 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | exitcode: 0
[2025-10-12 21:48:29] 2025-10-13 01:47:34,344 | INFO     | exitmsg: OK
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | cpuconsumptiontime: 50421 s
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | nevents: 400
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | neventsw: 0
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | pid: 419684
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | pgrp: 419684
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | corecount: 8
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | event service: False
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348742, 3: 2348913, 14: 2348941, 25: 2348969, 33: 2349387, 36: 2349443, 17176: 2380872, 17184: 2389870, 17185: 2389926, 17198: 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | --------------------------------------------------
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | 
[2025-10-12 21:48:29] 2025-10-13 01:47:34,345 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:48:29] 2025-10-13 01:47:34,398 | INFO     | job 6840429838 has completed (purged errors)
[2025-10-12 21:48:29] 2025-10-13 01:47:34,398 | INFO     | overall cleanup function is called
[2025-10-12 21:48:29] 2025-10-13 01:47:35,420 | INFO     | --- collectZombieJob: --- 10, [419684]
[2025-10-12 21:48:29] 2025-10-13 01:47:35,421 | INFO     | zombie collector waiting for pid 419684
[2025-10-12 21:48:29] 2025-10-13 01:47:35,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:48:29] 2025-10-13 01:47:35,421 | INFO     | collected zombie processes
[2025-10-12 21:48:29] 2025-10-13 01:47:35,421 | INFO     | will attempt to kill all subprocesses of pid=419684
[2025-10-12 21:48:29] 2025-10-13 01:47:37,246 | INFO     | process IDs to be killed: [419684] (in reverse order)
[2025-10-12 21:48:29] 2025-10-13 01:47:37,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:48:29] 2025-10-13 01:47:37,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:48:29] 2025-10-13 01:47:37,575 | INFO     | did not find any defunct processes belonging to 419684
[2025-10-12 21:48:29] 2025-10-13 01:47:37,759 | INFO     | did not find any defunct processes belonging to 419684
[2025-10-12 21:48:29] 2025-10-13 01:47:37,765 | INFO     | ready for new job
[2025-10-12 21:48:29] 2025-10-13 01:47:37,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:48:29] 2025-10-13 01:47:37,775 | INFO     | ***************************************
[2025-10-12 21:48:29] 2025-10-13 01:47:37,775 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:48:29] 2025-10-13 01:47:37,775 | INFO     | ***************************************
[2025-10-12 21:48:29] 2025-10-13 01:47:37,775 | INFO     | 
[2025-10-12 21:48:29] 2025-10-13 01:47:37,861 | INFO     | architecture information:
[2025-10-12 21:48:29] 2025-10-13 01:47:37,903 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:48:29] 2025-10-13 01:47:37,930 | INFO     | cat /etc/os-release:
[2025-10-12 21:48:29] NAME="CentOS Linux"
[2025-10-12 21:48:29] VERSION="7 (Core)"
[2025-10-12 21:48:29] ID="centos"
[2025-10-12 21:48:29] ID_LIKE="rhel fedora"
[2025-10-12 21:48:29] VERSION_ID="7"
[2025-10-12 21:48:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:48:29] ANSI_COLOR="0;31"
[2025-10-12 21:48:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:48:29] HOME_URL="https://www.centos.org/"
[2025-10-12 21:48:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:48:29] 
[2025-10-12 21:48:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:48:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:48:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:48:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:48:29] 
[2025-10-12 21:48:29] 2025-10-13 01:47:37,930 | INFO     | ***************************************
[2025-10-12 21:48:29] 2025-10-13 01:47:38,434 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 21:48:29] 2025-10-13 01:47:38,494 | INFO     | sufficient remaining disk space (94258593792 B)
[2025-10-12 21:48:29] 2025-10-13 01:47:38,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:48:29] 2025-10-13 01:47:38,495 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:48:29] 2025-10-13 01:47:38,495 | INFO     | update_server=False
[2025-10-12 21:48:29] 2025-10-13 01:47:38,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:48:29] 2025-10-13 01:47:38,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:48:29] 2025-10-13 01:47:38,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:48:29] 2025-10-13 01:47:38,517 | INFO     | aborting loop
[2025-10-12 21:48:29] 2025-10-13 01:47:39,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:48:29] 2025-10-13 01:47:39,239 | INFO     | all payload control threads have been joined
[2025-10-12 21:48:29] 2025-10-13 01:47:39,449 | INFO     | all data control threads have been joined
[2025-10-12 21:48:29] 2025-10-13 01:47:39,503 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:39,523 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:39,764 | INFO     | all job control threads have been joined
[2025-10-12 21:48:29] 2025-10-13 01:47:39,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:39,832 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:39,965 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:39,987 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,012 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,245 | INFO     | [payload] control thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,374 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,375 | INFO     | [job] validate thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,455 | INFO     | [data] control thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,505 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:48:29] 2025-10-13 01:47:40,770 | INFO     | [job] control thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:40,810 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:47:44,704 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:48:29] 2025-10-13 01:48:08,701 | INFO     | PID=400127 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:48:29] 2025-10-13 01:48:08,701 | INFO     | .. there are 49 such processes running
[2025-10-12 21:48:29] 2025-10-13 01:48:08,701 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:48:29] 2025-10-13 01:48:08,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:48:29] 2025-10-13 01:48:08,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:48:29] 2025-10-13 01:48:21,173 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:48:29] 2025-10-13 01:48:22,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605956147008)>', '<ExcThread(monitor, started 140605468432128)>']
[2025-10-12 21:48:29] 2025-10-13 01:48:22,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:48:29] 2025-10-13 01:48:22,801 | INFO     | [monitor] control thread has ended
[2025-10-12 21:48:29] 2025-10-13 01:48:27,331 | INFO     | all workflow threads have been joined
[2025-10-12 21:48:29] 2025-10-13 01:48:27,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:48:29] 2025-10-13 01:48:27,332 | INFO     | traces error code: 0
[2025-10-12 21:48:29] 2025-10-13 01:48:27,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:48:29] 2025-10-13 01:48:28,051 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:48:29] 2025-10-13 01:48:28,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:48:29] 2025-10-13 01:48:28,097 [wrapper] pilotpid: 400127
[2025-10-12 21:48:29] 2025-10-13 01:48:28,100 [wrapper] Pilot exit status: 0
[2025-10-12 21:48:29] 2025-10-13 01:48:28,115 [wrapper] pandaids: 6840429838
[2025-10-12 21:48:29] 2025-10-13 01:48:28,237 [wrapper] cleanup supervisor_pilot 1424740 400128
[2025-10-12 21:48:29] 2025-10-13 01:48:28,240 [wrapper] Test setup, not cleaning
[2025-10-12 21:48:29] 2025-10-13 01:48:28,243 [wrapper] apfmon messages muted
[2025-10-12 21:48:29] 2025-10-13 01:48:28,245 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:48:29] 2025-10-13 01:48:28,247 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:48:29]  *** Error codes and diagnostics ***
[2025-10-12 21:48:29]     "exeErrorCode": 0,
[2025-10-12 21:48:29]     "exeErrorDiag": "",
[2025-10-12 21:48:29]     "pilotErrorCode": 0,
[2025-10-12 21:48:29]     "pilotErrorDiag": "",
[2025-10-12 21:48:29]  *** Listing of results directory ***
[2025-10-12 21:48:29] total 416496
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 21:48:29] -rwx------. 1 boincer umatlas     36292 Oct 12 13:32 runpilot2-wrapper.sh
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:32 queuedata.json
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:48:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:58 run_atlas
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:58 job.xml
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas 220111838 Oct 12 16:58 EVNT.46676267._004848.pool.root.1
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 16:58 input.tar.gz
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:58 start_atlas.sh
[2025-10-12 21:48:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:58 shared
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:58 boinc_lockfile
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:58 pandaJob.out
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas    975536 Oct 12 16:59 agis_schedconf.cvmfs.json
[2025-10-12 21:48:29] drwx------. 5 boincer umatlas      4096 Oct 12 16:59 pilot3
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas 197370562 Oct 12 21:46 HITS.46676269._084951.pool.root.1
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas       530 Oct 12 21:46 boinc_task_state.xml
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 21:46 init_data.xml
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas      1044 Oct 12 21:47 memory_monitor_summary.json
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas    478166 Oct 12 21:47 log.46676269._084951.job.log.tgz.1
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas        95 Oct 12 21:47 pilot_heartbeat.json
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas      7830 Oct 12 21:47 heartbeat.json
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:48 boinc_mmap_file
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:48 wrapper_checkpoint.txt
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas      4823 Oct 12 21:48 pilotlog.txt
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas   2072099 Oct 12 21:48 log.46676269._084951.job.log.1
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas       357 Oct 12 21:48 output.list
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:48 runtime_log
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas   2570240 Oct 12 21:48 result.tar.gz
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 21:48 runtime_log.err
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas       657 Oct 12 21:48 PwLMDmN7ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcXUMDmvz7ozm.diag
[2025-10-12 21:48:29] -rw-r--r--. 1 boincer umatlas     21014 Oct 12 21:48 stderr.txt
[2025-10-12 21:48:29] HITS file was successfully produced:
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas 197370562 Oct 12 21:46 shared/HITS.pool.root.1
[2025-10-12 21:48:29]  *** Contents of shared directory: ***
[2025-10-12 21:48:29] total 410800
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas 220111838 Oct 12 16:58 ATLAS.root_0
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 16:58 input.tar.gz
[2025-10-12 21:48:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:58 start_atlas.sh
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas 197370562 Oct 12 21:46 HITS.pool.root.1
[2025-10-12 21:48:29] -rw-------. 1 boincer umatlas   2570240 Oct 12 21:48 result.tar.gz
21:48:30 (393290): run_atlas exited; CPU time 51317.161281
21:48:30 (393290): called boinc_finish(0)

</stderr_txt>
]]>

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