Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:50:08 (3368885): wrapper (7.7.26015): starting
07:50:08 (3368885): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 07:50:08] Arguments: --nthreads 3
[2025-10-13 07:50:08] Threads: 3
[2025-10-13 07:50:08] Checking for CVMFS
[2025-10-13 07:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:50:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:50:08] 2.9.2.0 1719469 5414 87200 151650 0 57 30716117 36864000 0 130560 0 4332646 99.991 184196 809 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 07:50:08] CVMFS is ok
[2025-10-13 07:50:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:50:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:50:08] Further information can be found at the LHC@home message board.
[2025-10-13 07:50:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:50:08] Checking for apptainer binary...
[2025-10-13 07:50:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:50:08] Running /usr/bin/apptainer --version
[2025-10-13 07:50:08] apptainer version 1.4.1-1.1
[2025-10-13 07:50:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:50:08] thA349
[2025-10-13 07:50:08] apptainer works
[2025-10-13 07:50:08] Set ATHENA_PROC_NUMBER=3
[2025-10-13 07:50:08] Set ATHENA_CORE_NUMBER=3
[2025-10-13 07:50:08] Starting ATLAS job with PandaID=6840224792
[2025-10-13 07:50:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:10:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:10:26] 2025-10-13 07:09:31,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:10:26] 2025-10-13 07:09:31,624 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:31,648 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:31,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,020 | INFO     | [payload] control thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,098 | INFO     | [data] control thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,159 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,311 | INFO     | [job] control thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,655 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:32,969 | INFO     | [job] validate thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:33,079 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:33,611 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:09:34,580 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:10:26] 2025-10-13 07:10:19,877 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:10:26] 2025-10-13 07:10:21,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730723936064)>', '<ExcThread(monitor, started 139730234627840)>']
[2025-10-13 09:10:26] 2025-10-13 07:10:21,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:10:26] 2025-10-13 07:10:21,841 | INFO     | [monitor] control thread has ended
[2025-10-13 09:10:26] 2025-10-13 07:10:26,338 | INFO     | all workflow threads have been joined
[2025-10-13 09:10:26] 2025-10-13 07:10:26,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:10:26] 2025-10-13 07:10:26,339 | INFO     | traces error code: 0
[2025-10-13 09:10:26] 2025-10-13 07:10:26,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:10:26] 2025-10-13 07:10:26,390 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:10:26] 2025-10-13 07:10:26,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:10:26] 2025-10-13 07:10:26,395 [wrapper] pilotpid: 3372604
[2025-10-13 09:10:26] 2025-10-13 07:10:26,397 [wrapper] Pilot exit status: 0
[2025-10-13 09:10:26] 2025-10-13 07:10:26,405 [wrapper] pandaids: 6840224792
[2025-10-13 09:10:26] 2025-10-13 07:10:26,423 [wrapper] cleanup supervisor_pilot 3391958 3372605
[2025-10-13 09:10:26] 2025-10-13 07:10:26,426 [wrapper] Test setup, not cleaning
[2025-10-13 09:10:26] 2025-10-13 07:10:26,428 [wrapper] apfmon messages muted
[2025-10-13 09:10:26] 2025-10-13 07:10:26,431 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:10:26] 2025-10-13 07:10:26,433 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:10:26]  *** Error codes and diagnostics ***
[2025-10-13 09:10:26]     "exeErrorCode": 0,
[2025-10-13 09:10:26]     "exeErrorDiag": "",
[2025-10-13 09:10:26]     "pilotErrorCode": 0,
[2025-10-13 09:10:26]     "pilotErrorDiag": "",
[2025-10-13 09:10:26]  *** Listing of results directory ***
[2025-10-13 09:10:26] total 405968
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:21 queuedata.json
[2025-10-13 09:10:26] -rwx------ 1 boinc boinc     36292 Oct 12 17:22 runpilot2-wrapper.sh
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 07:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:10:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 07:50 run_atlas
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 07:50 job.xml
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc 220197095 Oct 13 07:50 EVNT.46676267._004565.pool.root.1
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc    569685 Oct 13 07:50 input.tar.gz
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:50 start_atlas.sh
[2025-10-13 09:10:26] drwxrwx--x 2 boinc boinc      4096 Oct 13 07:50 shared
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:50 boinc_setup_complete
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      6446 Oct 13 07:50 init_data.xml
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 07:50 boinc_lockfile
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      2549 Oct 13 07:50 pandaJob.out
[2025-10-13 09:10:26] -rw------- 1 boinc boinc    973230 Oct 13 07:50 agis_schedconf.cvmfs.json
[2025-10-13 09:10:26] -rw------- 1 boinc boinc   1560580 Oct 13 07:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:10:26] drwx------ 5 boinc boinc      4096 Oct 13 07:50 pilot3
[2025-10-13 09:10:26] -rw------- 1 boinc boinc        95 Oct 13 09:08 pilot_heartbeat.json
[2025-10-13 09:10:26] -rw------- 1 boinc boinc 189694750 Oct 13 09:09 HITS.46676269._082087.pool.root.1
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:09 boinc_task_state.xml
[2025-10-13 09:10:26] -rw------- 1 boinc boinc      1033 Oct 13 09:09 memory_monitor_summary.json
[2025-10-13 09:10:26] -rw------- 1 boinc boinc    263799 Oct 13 09:09 log.46676269._082087.job.log.tgz.1
[2025-10-13 09:10:26] -rw------- 1 boinc boinc      7759 Oct 13 09:09 heartbeat.json
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:09 boinc_mmap_file
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:09 wrapper_checkpoint.txt
[2025-10-13 09:10:26] -rw------- 1 boinc boinc      4556 Oct 13 09:10 pilotlog.txt
[2025-10-13 09:10:26] -rw------- 1 boinc boinc    700656 Oct 13 09:10 log.46676269._082087.job.log.1
[2025-10-13 09:10:26] -rw------- 1 boinc boinc       357 Oct 13 09:10 output.list
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:10 runtime_log
[2025-10-13 09:10:26] -rw------- 1 boinc boinc    983040 Oct 13 09:10 result.tar.gz
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      8777 Oct 13 09:10 runtime_log.err
[2025-10-13 09:10:26] -rw------- 1 boinc boinc       658 Oct 13 09:10 8DZNDmN5CS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsQkNDmKH9X1m.diag
[2025-10-13 09:10:26] -rw-r--r-- 1 boinc boinc      5476 Oct 13 09:10 stderr.txt
[2025-10-13 09:10:26] HITS file was successfully produced:
[2025-10-13 09:10:26] -rw------- 1 boinc boinc 189694750 Oct 13 09:09 shared/HITS.pool.root.1
[2025-10-13 09:10:26]  *** Contents of shared directory: ***
[2025-10-13 09:10:26] total 401836
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc 220197095 Oct 13 07:50 ATLAS.root_0
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc    569685 Oct 13 07:50 input.tar.gz
[2025-10-13 09:10:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 07:50 start_atlas.sh
[2025-10-13 09:10:26] -rw------- 1 boinc boinc 189694750 Oct 13 09:09 HITS.pool.root.1
[2025-10-13 09:10:26] -rw------- 1 boinc boinc    983040 Oct 13 09:10 result.tar.gz
09:10:27 (3368885): run_atlas exited; CPU time 13583.929097
09:10:27 (3368885): called boinc_finish(0)

</stderr_txt>
]]>

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