Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:42 (20444): wrapper (7.7.26015): starting
16:57:42 (20444): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:57:42] Arguments: --nthreads 8
[2025-10-12 16:57:42] Threads: 8
[2025-10-12 16:57:42] Checking for CVMFS
[2025-10-12 16:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:57:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:57:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:57:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:57:42] 2.11.2.0 10718 53420 122732 151636 1 188 13040680 18432000 992 130560 0 48170189 99.975 2281981 37477 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:57:42] CVMFS is ok
[2025-10-12 16:57:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:57:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:57:42] Further information can be found at the LHC@home message board.
[2025-10-12 16:57:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:57:42] Checking for apptainer binary...
[2025-10-12 16:57:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:57:42] Running /usr/bin/apptainer --version
[2025-10-12 16:57:42] apptainer version 1.3.2-1.el7
[2025-10-12 16:57:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:57:43] c-206-2.aglt2.org
[2025-10-12 16:57:43] apptainer works
[2025-10-12 16:57:43] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:57:43] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:57:43] Starting ATLAS job with PandaID=6840712847
[2025-10-12 16:57:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:00:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:00:16] 2025-10-12 23:59:23,399 | INFO     | current chi2=1.2991123539011444 (change=-0.05655605101008111 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,400 | INFO     | right removable region: 172
[2025-10-12 20:00:16] 2025-10-12 23:59:23,400 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | sum of deviations: 3990199954.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | mean x: 1760308247.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | mean y: 2498431.838150289
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | -- intersect: -4372532830.005442
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | intersect: -4372532830.005442
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | chi2: 0.009964620548415173
[2025-10-12 20:00:16] 2025-10-12 23:59:23,401 | INFO     | current chi2=0.009964620548415173 (change=99.23253318973101 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,402 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,402 | INFO     | sum of deviations: 3907641669.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,402 | INFO     | mean x: 1760308399.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | mean y: 2498501.351190476
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | -- intersect: -4676065898.85755
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | intersect: -4676065898.85755
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | chi2: 0.007211572958636386
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | current chi2=0.007211572958636386 (change=27.628223035714562 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,403 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,404 | INFO     | sum of deviations: 5302097186.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,404 | INFO     | mean x: 1760308552.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,404 | INFO     | mean y: 2496829.208588957
[2025-10-12 20:00:16] 2025-10-12 23:59:23,404 | INFO     | -- intersect: -6947931860.230952
[2025-10-12 20:00:16] 2025-10-12 23:59:23,405 | INFO     | intersect: -6947931860.230952
[2025-10-12 20:00:16] 2025-10-12 23:59:23,405 | INFO     | chi2: 0.003017177505223695
[2025-10-12 20:00:16] 2025-10-12 23:59:23,405 | INFO     | current chi2=0.003017177505223695 (change=58.162005397027784 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,405 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,406 | INFO     | sum of deviations: 5447514353.999999
[2025-10-12 20:00:16] 2025-10-12 23:59:23,406 | INFO     | mean x: 1760308704.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,406 | INFO     | mean y: 2496666.265822785
[2025-10-12 20:00:16] 2025-10-12 23:59:23,406 | INFO     | -- intersect: -7838205046.598542
[2025-10-12 20:00:16] 2025-10-12 23:59:23,406 | INFO     | intersect: -7838205046.598542
[2025-10-12 20:00:16] 2025-10-12 23:59:23,407 | INFO     | chi2: 0.0006305496268796852
[2025-10-12 20:00:16] 2025-10-12 23:59:23,407 | INFO     | current chi2=0.0006305496268796852 (change=79.1013413765679 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,407 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | sum of deviations: 4770816100.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | mean x: 1760308857.0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | mean y: 2497583.6732026143
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | -- intersect: -7559688967.612068
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | intersect: -7559688967.612068
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | chi2: 0.0005816592659217803
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | current chi2=0.0005816592659217803 (change=7.7536103224486865 %)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,408 | INFO     | left removable region: 50
[2025-10-12 20:00:16] 2025-10-12 23:59:23,409 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,409 | INFO     | sum of deviations: 1906996487.5000017
[2025-10-12 20:00:16] 2025-10-12 23:59:23,409 | INFO     | mean x: 1760309436.5
[2025-10-12 20:00:16] 2025-10-12 23:59:23,409 | INFO     | mean y: 2501341.4344262294
[2025-10-12 20:00:16] 2025-10-12 23:59:23,409 | INFO     | -- intersect: -5959748542.771677
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | intersect: -5959748542.771677
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | chi2: 0.0003347570693173021
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | -- intersect: -5959748542.771677
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | current memory leak: 3.39 B/s (using 122 data points, chi2=0.00)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | could have reported an average CPU frequency of 2415 MHz (9 samples)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,410 | INFO     | ..............................
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . Timing measurements:
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . get job = 0 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . initial setup = 2 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . payload setup = 4 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . stage-in = 0 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . payload execution = 10859 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . stage-out = 1 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | . log creation = 0 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,411 | INFO     | ..............................
[2025-10-12 20:00:16] 2025-10-12 23:59:23,493 | INFO     | 
[2025-10-12 20:00:16] 2025-10-12 23:59:23,494 | INFO     | job summary report
[2025-10-12 20:00:16] 2025-10-12 23:59:23,494 | INFO     | --------------------------------------------------
[2025-10-12 20:00:16] 2025-10-12 23:59:23,494 | INFO     | PanDA job id: 6840712847
[2025-10-12 20:00:16] 2025-10-12 23:59:23,494 | INFO     | task id: 46676269
[2025-10-12 20:00:16] 2025-10-12 23:59:23,494 | INFO     | errors: (none)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | pilot state: finished 
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | transexitcode: 0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | exeerrorcode: 0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | exeerrordiag: 
[2025-10-12 20:00:16] 2025-10-12 23:59:23,495 | INFO     | exitcode: 0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | exitmsg: OK
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | cpuconsumptiontime: 81652 s
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | nevents: 400
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | neventsw: 0
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | pid: 11723
[2025-10-12 20:00:16] 2025-10-12 23:59:23,496 | INFO     | pgrp: 11723
[2025-10-12 20:00:16] 2025-10-12 23:59:23,497 | INFO     | corecount: 8
[2025-10-12 20:00:16] 2025-10-12 23:59:23,497 | INFO     | event service: False
[2025-10-12 20:00:16] 2025-10-12 23:59:23,497 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10868: 2378248, 10870: 2387246, 10871: 2387302, 10877: 2387688}
[2025-10-12 20:00:16] 2025-10-12 23:59:23,497 | INFO     | --------------------------------------------------
[2025-10-12 20:00:16] 2025-10-12 23:59:23,497 | INFO     | 
[2025-10-12 20:00:16] 2025-10-12 23:59:23,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 20:00:16] 2025-10-12 23:59:23,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:00:16] 2025-10-12 23:59:23,517 | INFO     | job 6840712847 has completed (purged errors)
[2025-10-12 20:00:16] 2025-10-12 23:59:23,517 | INFO     | overall cleanup function is called
[2025-10-12 20:00:16] 2025-10-12 23:59:24,523 | INFO     | --- collectZombieJob: --- 10, [11723]
[2025-10-12 20:00:16] 2025-10-12 23:59:24,525 | INFO     | zombie collector waiting for pid 11723
[2025-10-12 20:00:16] 2025-10-12 23:59:24,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:00:16] 2025-10-12 23:59:24,526 | INFO     | collected zombie processes
[2025-10-12 20:00:16] 2025-10-12 23:59:24,526 | INFO     | will attempt to kill all subprocesses of pid=11723
[2025-10-12 20:00:16] 2025-10-12 23:59:24,672 | INFO     | process IDs to be killed: [11723] (in reverse order)
[2025-10-12 20:00:16] 2025-10-12 23:59:24,709 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:00:16] 2025-10-12 23:59:24,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:00:16] 2025-10-12 23:59:24,712 | INFO     | did not find any defunct processes belonging to 11723
[2025-10-12 20:00:16] 2025-10-12 23:59:24,714 | INFO     | did not find any defunct processes belonging to 11723
[2025-10-12 20:00:16] 2025-10-12 23:59:24,714 | INFO     | ready for new job
[2025-10-12 20:00:16] 2025-10-12 23:59:24,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:00:16] 2025-10-12 23:59:24,717 | INFO     | ***************************************
[2025-10-12 20:00:16] 2025-10-12 23:59:24,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:00:16] 2025-10-12 23:59:24,717 | INFO     | ***************************************
[2025-10-12 20:00:16] 2025-10-12 23:59:24,717 | INFO     | 
[2025-10-12 20:00:16] 2025-10-12 23:59:24,718 | INFO     | architecture information:
[2025-10-12 20:00:16] 2025-10-12 23:59:24,718 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:00:16] 2025-10-12 23:59:24,728 | INFO     | cat /etc/os-release:
[2025-10-12 20:00:16] NAME="CentOS Linux"
[2025-10-12 20:00:16] VERSION="7 (Core)"
[2025-10-12 20:00:16] ID="centos"
[2025-10-12 20:00:16] ID_LIKE="rhel fedora"
[2025-10-12 20:00:16] VERSION_ID="7"
[2025-10-12 20:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:00:16] ANSI_COLOR="0;31"
[2025-10-12 20:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:00:16] HOME_URL="https://www.centos.org/"
[2025-10-12 20:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:00:16] 
[2025-10-12 20:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:00:16] 
[2025-10-12 20:00:16] 2025-10-12 23:59:24,728 | INFO     | ***************************************
[2025-10-12 20:00:16] 2025-10-12 23:59:25,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 20:00:16] 2025-10-12 23:59:25,243 | INFO     | sufficient remaining disk space (28285337600 B)
[2025-10-12 20:00:16] 2025-10-12 23:59:25,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:00:16] 2025-10-12 23:59:25,243 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:00:16] 2025-10-12 23:59:25,243 | INFO     | update_server=False
[2025-10-12 20:00:16] 2025-10-12 23:59:25,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:00:16] 2025-10-12 23:59:25,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:00:16] 2025-10-12 23:59:25,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:00:16] 2025-10-12 23:59:25,372 | INFO     | all data control threads have been joined
[2025-10-12 20:00:16] 2025-10-12 23:59:25,661 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:00:16] 2025-10-12 23:59:25,661 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:00:16] 2025-10-12 23:59:25,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:00:16] 2025-10-12 23:59:25,661 | INFO     | will abort loop
[2025-10-12 20:00:16] 2025-10-12 23:59:25,993 | INFO     | all payload control threads have been joined
[2025-10-12 20:00:16] 2025-10-12 23:59:26,249 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,249 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,376 | INFO     | [data] control thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,568 | INFO     | [job] validate thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,667 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,700 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,945 | INFO     | all job control threads have been joined
[2025-10-12 20:00:16] 2025-10-12 23:59:26,998 | INFO     | [payload] control thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:26,999 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,070 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,129 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,246 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,249 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,745 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,950 | INFO     | [job] control thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:27,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:00:16] 2025-10-12 23:59:31,986 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:00:16] 2025-10-12 23:59:54,909 | INFO     | PID=26136 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 20:00:16] 2025-10-12 23:59:54,909 | INFO     | .. there are 3 such processes running
[2025-10-12 20:00:16] 2025-10-12 23:59:54,910 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:00:16] 2025-10-12 23:59:54,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:00:16] 2025-10-12 23:59:54,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:00:16] 2025-10-13 00:00:10,211 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:00:16] 2025-10-13 00:00:11,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617213380416)>', '<ExcThread(monitor, started 140616415569664)>']
[2025-10-12 20:00:16] 2025-10-13 00:00:11,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:00:16] 2025-10-13 00:00:11,995 | INFO     | [monitor] control thread has ended
[2025-10-12 20:00:16] 2025-10-13 00:00:16,575 | INFO     | all workflow threads have been joined
[2025-10-12 20:00:16] 2025-10-13 00:00:16,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:00:16] 2025-10-13 00:00:16,576 | INFO     | traces error code: 0
[2025-10-12 20:00:16] 2025-10-13 00:00:16,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:00:16] 2025-10-13 00:00:16,668 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:00:16] 2025-10-13 00:00:16,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:00:16] 2025-10-13 00:00:16,672 [wrapper] pilotpid: 26136
[2025-10-12 20:00:16] 2025-10-13 00:00:16,674 [wrapper] Pilot exit status: 0
[2025-10-12 20:00:16] 2025-10-13 00:00:16,681 [wrapper] pandaids: 6840712847
[2025-10-12 20:00:16] 2025-10-13 00:00:16,710 [wrapper] cleanup supervisor_pilot  1372 26137
[2025-10-12 20:00:16] 2025-10-13 00:00:16,712 [wrapper] Test setup, not cleaning
[2025-10-12 20:00:16] 2025-10-13 00:00:16,714 [wrapper] apfmon messages muted
[2025-10-12 20:00:16] 2025-10-13 00:00:16,716 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:00:16] 2025-10-13 00:00:16,718 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:00:16]  *** Error codes and diagnostics ***
[2025-10-12 20:00:16]     "exeErrorCode": 0,
[2025-10-12 20:00:16]     "exeErrorDiag": "",
[2025-10-12 20:00:16]     "pilotErrorCode": 0,
[2025-10-12 20:00:16]     "pilotErrorDiag": "",
[2025-10-12 20:00:16]  *** Listing of results directory ***
[2025-10-12 20:00:16] total 408760
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:23 queuedata.json
[2025-10-12 20:00:16] -rwx------ 1 boincer umatlas     36292 Oct 12 15:23 runpilot2-wrapper.sh
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:00:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:57 run_atlas
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:57 job.xml
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas 218012306 Oct 12 16:57 EVNT.46676267._004449.pool.root.1
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:57 start_atlas.sh
[2025-10-12 20:00:16] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:57 shared
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 16:57 input.tar.gz
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:57 boinc_lockfile
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:57 pandaJob.out
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas    975536 Oct 12 16:57 agis_schedconf.cvmfs.json
[2025-10-12 20:00:16] drwx------ 5 boincer umatlas      4096 Oct 12 16:57 pilot3
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 19:56 init_data.xml
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas 192778887 Oct 12 19:58 HITS.46676269._087360.pool.root.1
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas       530 Oct 12 19:58 boinc_task_state.xml
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas      1054 Oct 12 19:59 memory_monitor_summary.json
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas   1560580 Oct 12 19:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas    406146 Oct 12 19:59 log.46676269._087360.job.log.tgz.1
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas      7855 Oct 12 19:59 heartbeat.json
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas        95 Oct 12 19:59 pilot_heartbeat.json
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 20:00 boinc_mmap_file
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas        28 Oct 12 20:00 wrapper_checkpoint.txt
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas      5007 Oct 12 20:00 pilotlog.txt
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas   1529952 Oct 12 20:00 log.46676269._087360.job.log.1
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas       357 Oct 12 20:00 output.list
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas       620 Oct 12 20:00 runtime_log
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas   1955840 Oct 12 20:00 result.tar.gz
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 20:00 runtime_log.err
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas       659 Oct 12 20:00 m1oLDmiqGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiGlNDmSc1Fun.diag
[2025-10-12 20:00:16] -rw-r--r-- 1 boincer umatlas     20959 Oct 12 20:00 stderr.txt
[2025-10-12 20:00:16] HITS file was successfully produced:
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas 192778887 Oct 12 19:58 shared/HITS.pool.root.1
[2025-10-12 20:00:16]  *** Contents of shared directory: ***
[2025-10-12 20:00:16] total 403660
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas 218012306 Oct 12 16:57 ATLAS.root_0
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:57 start_atlas.sh
[2025-10-12 20:00:16] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 16:57 input.tar.gz
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas 192778887 Oct 12 19:58 HITS.pool.root.1
[2025-10-12 20:00:16] -rw------- 1 boincer umatlas   1955840 Oct 12 20:00 result.tar.gz
20:00:17 (20444): run_atlas exited; CPU time 81785.011997
20:00:17 (20444): called boinc_finish(0)

</stderr_txt>
]]>

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