Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:59:05 (1070507): wrapper (7.7.26015): starting
20:59:05 (1070507): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:59:05] Arguments: --nthreads 8
[2025-10-12 20:59:05] Threads: 8
[2025-10-12 20:59:05] Checking for CVMFS
[2025-10-12 20:59:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:59:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:59:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:59:06] 2.13.2.0 654572 130011 519636 151642 0 881 17225647 32935936 37176 16776704 0 455340567 99.685 371505436 16887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:59:06] CVMFS is ok
[2025-10-12 20:59:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:59:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:59:06] Further information can be found at the LHC@home message board.
[2025-10-12 20:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:59:06] Checking for apptainer binary...
[2025-10-12 20:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:59:06] Running /usr/bin/apptainer --version
[2025-10-12 20:59:06] apptainer version 1.4.3-1.el9
[2025-10-12 20:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:59:07] c7-3-28.aglt2.org
[2025-10-12 20:59:07] apptainer works
[2025-10-12 20:59:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:59:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:59:07] Starting ATLAS job with PandaID=6840428737
[2025-10-12 20:59:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:07:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:07:44] 2025-10-13 03:06:59,616 | INFO     | intersect: -28059159787.603363
[2025-10-12 23:07:44] 2025-10-13 03:06:59,616 | INFO     | chi2: 1.498148262342875
[2025-10-12 23:07:44] 2025-10-13 03:06:59,616 | INFO     | sum of square deviations: 535781239.9916659
[2025-10-12 23:07:44] 2025-10-13 03:06:59,633 | INFO     | sum of deviations: 9396377601.266672
[2025-10-12 23:07:44] 2025-10-13 03:06:59,633 | INFO     | mean x: 1760320839.5083334
[2025-10-12 23:07:44] 2025-10-13 03:06:59,633 | INFO     | mean y: 2133439.7333333334
[2025-10-12 23:07:44] 2025-10-13 03:06:59,633 | INFO     | -- intersect: -30869868177.300404
[2025-10-12 23:07:44] 2025-10-13 03:06:59,633 | INFO     | intersect: -30869868177.300404
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | chi2: 1.500320800382393
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | current chi2=1.500320800382393 (change=-0.14501488898838177 %)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | right removable region: 119
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | sum of square deviations: 535780629.9916659
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | sum of deviations: -5465602279.433337
[2025-10-12 23:07:44] 2025-10-13 03:06:59,634 | INFO     | mean x: 1760321144.5083334
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | mean y: 2166406.433333333
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | -- intersect: 17959544335.734562
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | intersect: 17959544335.734562
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | chi2: 0.13414179159049291
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | current chi2=0.13414179159049291 (change=91.04616045272344 %)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,635 | INFO     | sum of square deviations: 471555864.99130464
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | sum of deviations: -362131004.1999998
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | mean x: 1760321297.0086956
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | mean y: 2154296.2
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | -- intersect: 1353991833.0147734
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | intersect: 1353991833.0147734
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | chi2: 0.05578143604955338
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | current chi2=0.05578143604955338 (change=58.416064532787416 %)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,636 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | sum of deviations: 2010624263.5000005
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | mean x: 1760321449.5
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | mean y: 2148120.7363636363
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | -- intersect: -8574198284.337879
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | intersect: -8574198284.337879
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | chi2: 0.03254433589722235
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | current chi2=0.03254433589722235 (change=41.65740754986726 %)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,637 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | sum of deviations: 2280736869.0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | mean x: 1760321602.0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | mean y: 2147404.742857143
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | -- intersect: -11183478074.715996
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | intersect: -11183478074.715996
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | chi2: 0.027678125372715037
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | current chi2=0.027678125372715037 (change=14.952557458462826 %)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | left removable region: 40
[2025-10-12 23:07:44] 2025-10-13 03:06:59,638 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | sum of deviations: 642143339.9999999
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | mean x: 1760322029.0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | mean y: 2154029.4556962023
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | -- intersect: -7392774849.804787
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | intersect: -7392774849.804787
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | chi2: 0.02124247914979981
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | -- intersect: -7392774849.804787
[2025-10-12 23:07:44] 2025-10-13 03:06:59,639 | INFO     | current memory leak: 4.20 B/s (using 79 data points, chi2=0.02)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | could have reported an average CPU frequency of 3129 MHz (8 samples)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | ..............................
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . Timing measurements:
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . get job = 0 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . initial setup = 3 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . payload setup = 13 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . stage-in = 0 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . payload execution = 7602 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . stage-out = 1 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | . log creation = 0 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,645 | INFO     | ..............................
[2025-10-12 23:07:44] 2025-10-13 03:06:59,750 | INFO     | 
[2025-10-12 23:07:44] 2025-10-13 03:06:59,750 | INFO     | job summary report
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | --------------------------------------------------
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | PanDA job id: 6840428737
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | task id: 46676269
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | errors: (none)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | pilot state: finished 
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | transexitcode: 0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | exeerrorcode: 0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | exeerrordiag: 
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | exitcode: 0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | exitmsg: OK
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | cpuconsumptiontime: 31580 s
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | nevents: 400
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | neventsw: 0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | pid: 1082850
[2025-10-12 23:07:44] 2025-10-13 03:06:59,751 | INFO     | pgrp: 1082850
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | corecount: 8
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | event service: False
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | sizes: {0: 2348680, 1: 2348879, 9: 2349141, 12: 2349169, 7621: 2376673, 7623: 2385855, 7636: 2385993}
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | --------------------------------------------------
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | 
[2025-10-12 23:07:44] 2025-10-13 03:06:59,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:07:44] 2025-10-13 03:06:59,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,779 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:07:44] 2025-10-13 03:06:59,780 | INFO     | job 6840428737 has completed (purged errors)
[2025-10-12 23:07:44] 2025-10-13 03:06:59,780 | INFO     | overall cleanup function is called
[2025-10-12 23:07:44] 2025-10-13 03:07:00,788 | INFO     | --- collectZombieJob: --- 10, [1082850]
[2025-10-12 23:07:44] 2025-10-13 03:07:00,789 | INFO     | zombie collector waiting for pid 1082850
[2025-10-12 23:07:44] 2025-10-13 03:07:00,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:07:44] 2025-10-13 03:07:00,791 | INFO     | collected zombie processes
[2025-10-12 23:07:44] 2025-10-13 03:07:00,791 | INFO     | will attempt to kill all subprocesses of pid=1082850
[2025-10-12 23:07:44] 2025-10-13 03:07:01,284 | INFO     | process IDs to be killed: [1082850] (in reverse order)
[2025-10-12 23:07:44] 2025-10-13 03:07:01,461 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:07:44] 2025-10-13 03:07:01,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:07:44] 2025-10-13 03:07:01,484 | INFO     | did not find any defunct processes belonging to 1082850
[2025-10-12 23:07:44] 2025-10-13 03:07:01,506 | INFO     | did not find any defunct processes belonging to 1082850
[2025-10-12 23:07:44] 2025-10-13 03:07:01,506 | INFO     | ready for new job
[2025-10-12 23:07:44] 2025-10-13 03:07:01,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:07:44] 2025-10-13 03:07:01,508 | INFO     | ***************************************
[2025-10-12 23:07:44] 2025-10-13 03:07:01,508 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:07:44] 2025-10-13 03:07:01,508 | INFO     | ***************************************
[2025-10-12 23:07:44] 2025-10-13 03:07:01,508 | INFO     | 
[2025-10-12 23:07:44] 2025-10-13 03:07:01,526 | INFO     | architecture information:
[2025-10-12 23:07:44] 2025-10-13 03:07:01,532 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:07:44] 2025-10-13 03:07:01,577 | INFO     | cat /etc/os-release:
[2025-10-12 23:07:44] NAME="CentOS Linux"
[2025-10-12 23:07:44] VERSION="7 (Core)"
[2025-10-12 23:07:44] ID="centos"
[2025-10-12 23:07:44] ID_LIKE="rhel fedora"
[2025-10-12 23:07:44] VERSION_ID="7"
[2025-10-12 23:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:07:44] ANSI_COLOR="0;31"
[2025-10-12 23:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:07:44] HOME_URL="https://www.centos.org/"
[2025-10-12 23:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:07:44] 
[2025-10-12 23:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:07:44] 
[2025-10-12 23:07:44] 2025-10-13 03:07:01,577 | INFO     | ***************************************
[2025-10-12 23:07:44] 2025-10-13 03:07:02,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:07:44] 2025-10-13 03:07:02,179 | INFO     | sufficient remaining disk space (74324115456 B)
[2025-10-12 23:07:44] 2025-10-13 03:07:02,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:07:44] 2025-10-13 03:07:02,179 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:07:44] 2025-10-13 03:07:02,179 | INFO     | update_server=False
[2025-10-12 23:07:44] 2025-10-13 03:07:02,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:07:44] 2025-10-13 03:07:02,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:07:44] 2025-10-13 03:07:02,602 | INFO     | all data control threads have been joined
[2025-10-12 23:07:44] 2025-10-13 03:07:02,628 | INFO     | all job control threads have been joined
[2025-10-12 23:07:44] 2025-10-13 03:07:02,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:07:44] 2025-10-13 03:07:03,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:07:44] 2025-10-13 03:07:03,080 | INFO     | aborting loop
[2025-10-12 23:07:44] 2025-10-13 03:07:03,188 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,310 | INFO     | all payload control threads have been joined
[2025-10-12 23:07:44] 2025-10-13 03:07:03,428 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,611 | INFO     | [data] control thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,634 | INFO     | [job] control thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,681 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,691 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:03,946 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,086 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,140 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,208 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,316 | INFO     | [payload] control thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,459 | INFO     | [job] validate thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:04,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:07:44] 2025-10-13 03:07:04,898 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:05,788 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:06,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:12,516 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:07:44] 2025-10-13 03:07:13,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:07:44] 2025-10-13 03:07:33,439 | INFO     | PID=1075325 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:07:44] 2025-10-13 03:07:33,440 | INFO     | .. there are 47 such processes running
[2025-10-12 23:07:44] 2025-10-13 03:07:33,440 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:07:44] 2025-10-13 03:07:33,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:07:44] 2025-10-13 03:07:33,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:07:44] 2025-10-13 03:07:38,672 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:07:44] 2025-10-13 03:07:39,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588650030912)>', '<ExcThread(monitor, started 140588129167104)>']
[2025-10-12 23:07:44] 2025-10-13 03:07:39,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:07:44] 2025-10-13 03:07:39,489 | INFO     | [monitor] control thread has ended
[2025-10-12 23:07:44] 2025-10-13 03:07:44,383 | INFO     | all workflow threads have been joined
[2025-10-12 23:07:44] 2025-10-13 03:07:44,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:07:44] 2025-10-13 03:07:44,383 | INFO     | traces error code: 0
[2025-10-12 23:07:44] 2025-10-13 03:07:44,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:07:44] 2025-10-13 03:07:44,552 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:07:44] 2025-10-13 03:07:44,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:07:44] 2025-10-13 03:07:44,556 [wrapper] pilotpid: 1075325
[2025-10-12 23:07:44] 2025-10-13 03:07:44,558 [wrapper] Pilot exit status: 0
[2025-10-12 23:07:44] 2025-10-13 03:07:44,570 [wrapper] pandaids: 6840428737
[2025-10-12 23:07:44] 2025-10-13 03:07:44,706 [wrapper] cleanup supervisor_pilot 1662591 1075326
[2025-10-12 23:07:44] 2025-10-13 03:07:44,710 [wrapper] Test setup, not cleaning
[2025-10-12 23:07:44] 2025-10-13 03:07:44,712 [wrapper] apfmon messages muted
[2025-10-12 23:07:44] 2025-10-13 03:07:44,714 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:07:44] 2025-10-13 03:07:44,716 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:07:44]  *** Error codes and diagnostics ***
[2025-10-12 23:07:44]     "exeErrorCode": 0,
[2025-10-12 23:07:44]     "exeErrorDiag": "",
[2025-10-12 23:07:44]     "pilotErrorCode": 0,
[2025-10-12 23:07:44]     "pilotErrorDiag": "",
[2025-10-12 23:07:44]  *** Listing of results directory ***
[2025-10-12 23:07:44] total 412052
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:04 queuedata.json
[2025-10-12 23:07:44] -rwx------. 1 boincer umatlas     36292 Oct 12 13:06 runpilot2-wrapper.sh
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:07:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:59 run_atlas
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:59 job.xml
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas 223630462 Oct 12 20:59 EVNT.46676267._004798.pool.root.1
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:59 start_atlas.sh
[2025-10-12 23:07:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:59 shared
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 20:59 input.tar.gz
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:59 boinc_lockfile
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 20:59 pandaJob.out
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas    975603 Oct 12 20:59 agis_schedconf.cvmfs.json
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:07:44] drwx------. 5 boincer umatlas      4096 Oct 12 20:59 pilot3
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 23:04 init_data.xml
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas 191704903 Oct 12 23:06 HITS.46676269._084321.pool.root.1
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:06 boinc_task_state.xml
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas      1043 Oct 12 23:06 memory_monitor_summary.json
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas    351029 Oct 12 23:06 log.46676269._084321.job.log.tgz.1
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas      7790 Oct 12 23:06 heartbeat.json
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas        95 Oct 12 23:07 pilot_heartbeat.json
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:07 boinc_mmap_file
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:07 wrapper_checkpoint.txt
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas      4896 Oct 12 23:07 pilotlog.txt
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas   1001676 Oct 12 23:07 log.46676269._084321.job.log.1
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas       357 Oct 12 23:07 output.list
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:07 runtime_log
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas   1372160 Oct 12 23:07 result.tar.gz
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 23:07 runtime_log.err
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas       654 Oct 12 23:07 7WWLDmThES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNmkNDmHel1So.diag
[2025-10-12 23:07:44] -rw-r--r--. 1 boincer umatlas     20934 Oct 12 23:07 stderr.txt
[2025-10-12 23:07:44] HITS file was successfully produced:
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas 191704903 Oct 12 23:06 shared/HITS.pool.root.1
[2025-10-12 23:07:44]  *** Contents of shared directory: ***
[2025-10-12 23:07:44] total 407524
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas 223630462 Oct 12 20:59 ATLAS.root_0
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:59 start_atlas.sh
[2025-10-12 23:07:44] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 20:59 input.tar.gz
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas 191704903 Oct 12 23:06 HITS.pool.root.1
[2025-10-12 23:07:44] -rw-------. 1 boincer umatlas   1372160 Oct 12 23:07 result.tar.gz
23:07:46 (1070507): run_atlas exited; CPU time 31905.147186
23:07:46 (1070507): called boinc_finish(0)

</stderr_txt>
]]>

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