Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:16:44 (3644288): wrapper (7.7.26015): starting
19:16:44 (3644288): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 19:16:44] Arguments: --nthreads 9
[2025-10-12 19:16:44] Threads: 9
[2025-10-12 19:16:44] Checking for CVMFS
[2025-10-12 19:16:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:16:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:16:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:16:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:16:44] 2.13.2.0 1263230 129893 333248 151640 0 740 29046839 32935936 24702 16776704 0 193745394 99.587 205239611 29097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:16:44] CVMFS is ok
[2025-10-12 19:16:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:16:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:16:44] Further information can be found at the LHC@home message board.
[2025-10-12 19:16:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:16:44] Checking for apptainer binary...
[2025-10-12 19:16:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:16:44] Running /usr/bin/apptainer --version
[2025-10-12 19:16:45] apptainer version 1.4.3-1.el9
[2025-10-12 19:16:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:16:45] c6-5-7-2.aglt2.org
[2025-10-12 19:16:45] apptainer works
[2025-10-12 19:16:45] Set ATHENA_PROC_NUMBER=9
[2025-10-12 19:16:45] Set ATHENA_CORE_NUMBER=9
[2025-10-12 19:16:45] Starting ATLAS job with PandaID=6840428520
[2025-10-12 19:16:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:09:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:09:34] 2025-10-13 02:08:54,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:09:34] 2025-10-13 02:08:54,929 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:09:34] 2025-10-13 02:08:54,929 | INFO     | sum of square deviations: 1470290238.994046
[2025-10-12 22:09:34] 2025-10-13 02:08:54,930 | INFO     | sum of deviations: 13156977165.452387
[2025-10-12 22:09:34] 2025-10-13 02:08:54,930 | INFO     | mean x: 1760316184.9940476
[2025-10-12 22:09:34] 2025-10-13 02:08:54,930 | INFO     | mean y: 2472452.4523809524
[2025-10-12 22:09:34] 2025-10-13 02:08:54,931 | INFO     | -- intersect: -15749818650.145855
[2025-10-12 22:09:34] 2025-10-13 02:08:54,931 | INFO     | intersect: -15749818650.145855
[2025-10-12 22:09:34] 2025-10-13 02:08:54,931 | INFO     | chi2: 2.0687942585177383
[2025-10-12 22:09:34] 2025-10-13 02:08:54,931 | INFO     | sum of square deviations: 1342888016.748466
[2025-10-12 22:09:34] 2025-10-13 02:08:54,937 | INFO     | sum of deviations: 22957849303.34969
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | mean x: 1760316032.4969325
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | mean y: 2483883.699386503
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | -- intersect: -30091663726.75225
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | intersect: -30091663726.75225
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | chi2: 1.3653010223035824
[2025-10-12 22:09:34] 2025-10-13 02:08:54,938 | INFO     | current chi2=1.3653010223035824 (change=34.00498784824542 %)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,939 | INFO     | sum of square deviations: 1223067698.0
[2025-10-12 22:09:34] 2025-10-13 02:08:54,939 | INFO     | sum of deviations: 22115376989.000004
[2025-10-12 22:09:34] 2025-10-13 02:08:54,939 | INFO     | mean x: 1760315880.0
[2025-10-12 22:09:34] 2025-10-13 02:08:54,939 | INFO     | mean y: 2482812.2721518986
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | -- intersect: -31827357326.24428
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | intersect: -31827357326.24428
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | chi2: 1.3663696848692433
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | current chi2=1.3663696848692433 (change=-0.0782730363636413 %)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | right removable region: 157
[2025-10-12 22:09:34] 2025-10-13 02:08:54,940 | INFO     | sum of square deviations: 1342857882.7361906
[2025-10-12 22:09:34] 2025-10-13 02:08:54,941 | INFO     | sum of deviations: -8946534327.656443
[2025-10-12 22:09:34] 2025-10-13 02:08:54,941 | INFO     | mean x: 1760316337.5092025
[2025-10-12 22:09:34] 2025-10-13 02:08:54,941 | INFO     | mean y: 2498471.1042944784
[2025-10-12 22:09:34] 2025-10-13 02:08:54,947 | INFO     | -- intersect: 11730270071.901785
[2025-10-12 22:09:34] 2025-10-13 02:08:54,947 | INFO     | intersect: 11730270071.901785
[2025-10-12 22:09:34] 2025-10-13 02:08:54,947 | INFO     | chi2: 0.7639699769896252
[2025-10-12 22:09:34] 2025-10-13 02:08:54,947 | INFO     | current chi2=0.7639699769896252 (change=63.071727705924765 %)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,947 | INFO     | sum of square deviations: 1223007063.898728
[2025-10-12 22:09:34] 2025-10-13 02:08:54,948 | INFO     | sum of deviations: -6298631565.101267
[2025-10-12 22:09:34] 2025-10-13 02:08:54,951 | INFO     | mean x: 1760316490.0253165
[2025-10-12 22:09:34] 2025-10-13 02:08:54,951 | INFO     | mean y: 2495144.025316456
[2025-10-12 22:09:34] 2025-10-13 02:08:54,951 | INFO     | -- intersect: 9068334038.934465
[2025-10-12 22:09:34] 2025-10-13 02:08:54,951 | INFO     | intersect: 9068334038.934465
[2025-10-12 22:09:34] 2025-10-13 02:08:54,951 | INFO     | chi2: 0.7320782417150143
[2025-10-12 22:09:34] 2025-10-13 02:08:54,952 | INFO     | current chi2=0.7320782417150143 (change=4.174474944719452 %)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,952 | INFO     | left removable region: 20
[2025-10-12 22:09:34] 2025-10-13 02:08:54,952 | INFO     | sum of square deviations: 797242521.5912421
[2025-10-12 22:09:34] 2025-10-13 02:08:54,952 | INFO     | sum of deviations: 1225308197.0145984
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | mean x: 1760316459.569343
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | mean y: 2511214.0510948906
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | -- intersect: -2702976926.4270954
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | intersect: -2702976926.4270954
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | chi2: 0.004268441304012557
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | -- intersect: -2702976926.4270954
[2025-10-12 22:09:34] 2025-10-13 02:08:54,953 | INFO     | current memory leak: 1.54 B/s (using 137 data points, chi2=0.00)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | could have reported an average CPU frequency of 2950 MHz (9 samples)
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | ..............................
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . Timing measurements:
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . get job = 0 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . initial setup = 3 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . payload setup = 16 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . stage-in = 0 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . payload execution = 10210 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,954 | INFO     | . stage-out = 2 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,955 | INFO     | . log creation = 0 s
[2025-10-12 22:09:34] 2025-10-13 02:08:54,955 | INFO     | ..............................
[2025-10-12 22:09:34] 2025-10-13 02:08:55,038 | INFO     | 
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | job summary report
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | --------------------------------------------------
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | PanDA job id: 6840428520
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | task id: 46676269
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | errors: (none)
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | pilot state: finished 
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | transexitcode: 0
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | exeerrorcode: 0
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | exeerrordiag: 
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | exitcode: 0
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | exitmsg: OK
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | cpuconsumptiontime: 39957 s
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | nevents: 400
[2025-10-12 22:09:34] 2025-10-13 02:08:55,039 | INFO     | neventsw: 0
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | pid: 3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | pgrp: 3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | corecount: 9
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | event service: False
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | sizes: {0: 2348806, 11: 2348806, 12: 2349096, 22: 2349124, 10232: 2378186, 10237: 2387368, 10272: 2387570}
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | --------------------------------------------------
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | 
[2025-10-12 22:09:34] 2025-10-13 02:08:55,040 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:09:34] 2025-10-13 02:08:55,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:09:34] 2025-10-13 02:08:55,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:09:34] 2025-10-13 02:08:55,108 | INFO     | job 6840428520 has completed (purged errors)
[2025-10-12 22:09:34] 2025-10-13 02:08:55,108 | INFO     | overall cleanup function is called
[2025-10-12 22:09:34] 2025-10-13 02:08:56,120 | INFO     | --- collectZombieJob: --- 10, [3657705]
[2025-10-12 22:09:34] 2025-10-13 02:08:56,121 | INFO     | zombie collector waiting for pid 3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:56,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:09:34] 2025-10-13 02:08:56,121 | INFO     | collected zombie processes
[2025-10-12 22:09:34] 2025-10-13 02:08:56,121 | INFO     | will attempt to kill all subprocesses of pid=3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:56,948 | INFO     | process IDs to be killed: [3657705] (in reverse order)
[2025-10-12 22:09:34] 2025-10-13 02:08:57,181 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:09:34] 2025-10-13 02:08:57,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:09:34] 2025-10-13 02:08:57,289 | INFO     | did not find any defunct processes belonging to 3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:57,382 | INFO     | did not find any defunct processes belonging to 3657705
[2025-10-12 22:09:34] 2025-10-13 02:08:57,383 | INFO     | ready for new job
[2025-10-12 22:09:34] 2025-10-13 02:08:57,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:09:34] 2025-10-13 02:08:57,386 | INFO     | ***************************************
[2025-10-12 22:09:34] 2025-10-13 02:08:57,386 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:09:34] 2025-10-13 02:08:57,386 | INFO     | ***************************************
[2025-10-12 22:09:34] 2025-10-13 02:08:57,386 | INFO     | 
[2025-10-12 22:09:34] 2025-10-13 02:08:57,402 | INFO     | architecture information:
[2025-10-12 22:09:34] 2025-10-13 02:08:57,425 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:09:34] 2025-10-13 02:08:57,525 | INFO     | cat /etc/os-release:
[2025-10-12 22:09:34] NAME="CentOS Linux"
[2025-10-12 22:09:34] VERSION="7 (Core)"
[2025-10-12 22:09:34] ID="centos"
[2025-10-12 22:09:34] ID_LIKE="rhel fedora"
[2025-10-12 22:09:34] VERSION_ID="7"
[2025-10-12 22:09:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:09:34] ANSI_COLOR="0;31"
[2025-10-12 22:09:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:09:34] HOME_URL="https://www.centos.org/"
[2025-10-12 22:09:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:09:34] 
[2025-10-12 22:09:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:09:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:09:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:09:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:09:34] 
[2025-10-12 22:09:34] 2025-10-13 02:08:57,538 | INFO     | ***************************************
[2025-10-12 22:09:34] 2025-10-13 02:08:58,042 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:09:34] 2025-10-13 02:08:58,126 | INFO     | sufficient remaining disk space (75554095104 B)
[2025-10-12 22:09:34] 2025-10-13 02:08:58,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:09:34] 2025-10-13 02:08:58,126 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:09:34] 2025-10-13 02:08:58,127 | INFO     | update_server=False
[2025-10-12 22:09:34] 2025-10-13 02:08:58,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:09:34] 2025-10-13 02:08:58,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:09:34] 2025-10-13 02:08:58,282 | INFO     | all job control threads have been joined
[2025-10-12 22:09:34] 2025-10-13 02:08:58,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:09:34] 2025-10-13 02:08:58,538 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:09:34] 2025-10-13 02:08:58,538 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:09:34] 2025-10-13 02:08:58,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:09:34] 2025-10-13 02:08:58,539 | INFO     | will abort loop
[2025-10-12 22:09:34] 2025-10-13 02:08:58,954 | INFO     | all payload control threads have been joined
[2025-10-12 22:09:34] 2025-10-13 02:08:59,142 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,146 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,168 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,259 | INFO     | all data control threads have been joined
[2025-10-12 22:09:34] 2025-10-13 02:08:59,288 | INFO     | [job] control thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,460 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,545 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,850 | INFO     | [job] validate thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,856 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:08:59,961 | INFO     | [payload] control thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:00,012 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:00,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:09:34] 2025-10-13 02:09:00,099 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:00,265 | INFO     | [data] control thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:00,338 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:01,109 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:02,285 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:09:34] 2025-10-13 02:09:27,069 | INFO     | PID=3648544 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:09:34] 2025-10-13 02:09:27,069 | INFO     | .. there are 29 such processes running
[2025-10-12 22:09:34] 2025-10-13 02:09:27,069 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:09:34] 2025-10-13 02:09:27,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:09:34] 2025-10-13 02:09:27,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:09:34] 2025-10-13 02:09:27,420 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:09:34] 2025-10-13 02:09:27,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419796330304)>', '<ExcThread(monitor, started 140419316836096)>']
[2025-10-12 22:09:34] 2025-10-13 02:09:28,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:09:34] 2025-10-13 02:09:28,076 | INFO     | [monitor] control thread has ended
[2025-10-12 22:09:34] 2025-10-13 02:09:32,645 | INFO     | all workflow threads have been joined
[2025-10-12 22:09:34] 2025-10-13 02:09:32,646 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:09:34] 2025-10-13 02:09:32,646 | INFO     | traces error code: 0
[2025-10-12 22:09:34] 2025-10-13 02:09:32,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:09:34] 2025-10-13 02:09:33,051 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:09:34] 2025-10-13 02:09:33,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:09:34] 2025-10-13 02:09:33,082 [wrapper] pilotpid: 3648544
[2025-10-12 22:09:34] 2025-10-13 02:09:33,112 [wrapper] Pilot exit status: 0
[2025-10-12 22:09:34] 2025-10-13 02:09:33,256 [wrapper] pandaids: 6840428520
[2025-10-12 22:09:34] 2025-10-13 02:09:33,354 [wrapper] cleanup supervisor_pilot   69411 3648545
[2025-10-12 22:09:34] 2025-10-13 02:09:33,392 [wrapper] Test setup, not cleaning
[2025-10-12 22:09:34] 2025-10-13 02:09:33,418 [wrapper] apfmon messages muted
[2025-10-12 22:09:34] 2025-10-13 02:09:33,431 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:09:34] 2025-10-13 02:09:33,434 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:09:34]  *** Error codes and diagnostics ***
[2025-10-12 22:09:34]     "exeErrorCode": 0,
[2025-10-12 22:09:34]     "exeErrorDiag": "",
[2025-10-12 22:09:34]     "pilotErrorCode": 0,
[2025-10-12 22:09:34]     "pilotErrorDiag": "",
[2025-10-12 22:09:34]  *** Listing of results directory ***
[2025-10-12 22:09:34] total 420596
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:52 queuedata.json
[2025-10-12 22:09:34] -rwx------. 1 boincer umatlas     36292 Oct 12 12:52 runpilot2-wrapper.sh
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:09:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:16 run_atlas
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:16 job.xml
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas 221480488 Oct 12 19:16 EVNT.46676267._004789.pool.root.1
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:16 start_atlas.sh
[2025-10-12 22:09:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:16 shared
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:16 input.tar.gz
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:16 boinc_lockfile
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 19:16 pandaJob.out
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas    975603 Oct 12 19:17 agis_schedconf.cvmfs.json
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:09:34] drwx------. 5 boincer umatlas      4096 Oct 12 19:17 pilot3
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 22:02 init_data.xml
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas 201720503 Oct 12 22:06 HITS.46676269._084122.pool.root.1
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas       529 Oct 12 22:07 boinc_task_state.xml
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas      1043 Oct 12 22:08 memory_monitor_summary.json
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas    428861 Oct 12 22:08 log.46676269._084122.job.log.tgz.1
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas      7825 Oct 12 22:08 heartbeat.json
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas        95 Oct 12 22:09 pilot_heartbeat.json
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas      5010 Oct 12 22:09 pilotlog.txt
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:09 boinc_mmap_file
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:09 wrapper_checkpoint.txt
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas   1363783 Oct 12 22:09 log.46676269._084122.job.log.1
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas       357 Oct 12 22:09 output.list
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:09 runtime_log
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas   1812480 Oct 12 22:09 result.tar.gz
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 22:09 runtime_log.err
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas       655 Oct 12 22:09 5dGMDmPUES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzjkNDmqSQkWm.diag
[2025-10-12 22:09:34] -rw-r--r--. 1 boincer umatlas     21001 Oct 12 22:09 stderr.txt
[2025-10-12 22:09:34] HITS file was successfully produced:
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas 201720503 Oct 12 22:06 shared/HITS.pool.root.1
[2025-10-12 22:09:34]  *** Contents of shared directory: ***
[2025-10-12 22:09:34] total 415640
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas 221480488 Oct 12 19:16 ATLAS.root_0
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:16 start_atlas.sh
[2025-10-12 22:09:34] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 19:16 input.tar.gz
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas 201720503 Oct 12 22:06 HITS.pool.root.1
[2025-10-12 22:09:34] -rw-------. 1 boincer umatlas   1812480 Oct 12 22:09 result.tar.gz
22:09:36 (3644288): run_atlas exited; CPU time 40142.677151
22:09:36 (3644288): called boinc_finish(0)

</stderr_txt>
]]>

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