Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:06 (1795768): wrapper (7.7.26015): starting
16:54:06 (1795768): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 16:54:06] Arguments: --nthreads 9
[2025-10-12 16:54:06] Threads: 9
[2025-10-12 16:54:06] Checking for CVMFS
[2025-10-12 16:54:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:54:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:54:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:54:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:54:06] 2.13.2.0 2624825 129750 291788 151636 2 502 34919766 40960001 20557 16776704 0 184784963 99.660 169773721 30843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:54:06] CVMFS is ok
[2025-10-12 16:54:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:54:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:54:06] Further information can be found at the LHC@home message board.
[2025-10-12 16:54:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:54:06] Checking for apptainer binary...
[2025-10-12 16:54:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:54:06] Running /usr/bin/apptainer --version
[2025-10-12 16:54:06] apptainer version 1.4.3-1.el9
[2025-10-12 16:54:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:54:07] c6-8-12-1.aglt2.org
[2025-10-12 16:54:07] apptainer works
[2025-10-12 16:54:07] Set ATHENA_PROC_NUMBER=9
[2025-10-12 16:54:07] Set ATHENA_CORE_NUMBER=9
[2025-10-12 16:54:07] Starting ATLAS job with PandaID=6840429762
[2025-10-12 16:54:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:39:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:39:59] 2025-10-13 01:39:12,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:39:59] 2025-10-13 01:39:12,756 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:39:59] 2025-10-13 01:39:12,765 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:39:59] 2025-10-13 01:39:12,766 | INFO     | sum of square deviations: 6734474957.354837
[2025-10-12 21:39:59] 2025-10-13 01:39:12,767 | INFO     | sum of deviations: 120719956772.37643
[2025-10-12 21:39:59] 2025-10-13 01:39:12,768 | INFO     | mean x: 1760310978.204301
[2025-10-12 21:39:59] 2025-10-13 01:39:12,768 | INFO     | mean y: 2231206.853046595
[2025-10-12 21:39:59] 2025-10-13 01:39:12,768 | INFO     | -- intersect: -31552517536.05866
[2025-10-12 21:39:59] 2025-10-13 01:39:12,768 | INFO     | intersect: -31552517536.05866
[2025-10-12 21:39:59] 2025-10-13 01:39:12,768 | INFO     | chi2: 2.5320684957549853
[2025-10-12 21:39:59] 2025-10-13 01:39:12,773 | INFO     | sum of square deviations: 6378834981.857643
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | sum of deviations: 134542737261.57285
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | mean x: 1760310825.6970804
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | mean y: 2237038.091240876
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | -- intersect: -37126335435.41912
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | intersect: -37126335435.41912
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | chi2: 1.8422741377213792
[2025-10-12 21:39:59] 2025-10-13 01:39:12,775 | INFO     | current chi2=1.8422741377213792 (change=27.242326153105527 %)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,776 | INFO     | sum of square deviations: 6035939431.330873
[2025-10-12 21:39:59] 2025-10-13 01:39:12,781 | INFO     | sum of deviations: 130937834637.76205
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | mean x: 1760310673.1895912
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | mean y: 2235435.2007434946
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | -- intersect: -38184242487.48526
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | intersect: -38184242487.48526
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | chi2: 1.8383798572691772
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | current chi2=1.8383798572691772 (change=0.21138441736030775 %)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,782 | INFO     | right removable region: 268
[2025-10-12 21:39:59] 2025-10-13 01:39:12,783 | INFO     | sum of square deviations: 6378867679.054747
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | sum of deviations: 74336467064.35762
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | mean x: 1760311130.7043796
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | mean y: 2250988.868613139
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | -- intersect: -20511626547.782066
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | intersect: -20511626547.782066
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | chi2: 0.9918435325078214
[2025-10-12 21:39:59] 2025-10-13 01:39:12,791 | INFO     | current chi2=0.9918435325078214 (change=60.82872425565707 %)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,792 | INFO     | sum of square deviations: 6035988356.342024
[2025-10-12 21:39:59] 2025-10-13 01:39:12,793 | INFO     | sum of deviations: 55178497752.97395
[2025-10-12 21:39:59] 2025-10-13 01:39:12,793 | INFO     | mean x: 1760311283.2081785
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | mean y: 2259502.375464684
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | -- intersect: -16089774883.837542
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | intersect: -16089774883.837542
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | chi2: 0.8453491417844768
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | current chi2=0.8453491417844768 (change=14.769909357874383 %)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,794 | INFO     | left removable region: 20
[2025-10-12 21:39:59] 2025-10-13 01:39:12,799 | INFO     | sum of square deviations: 4729812248.318531
[2025-10-12 21:39:59] 2025-10-13 01:39:12,800 | INFO     | sum of deviations: 52828855377.75007
[2025-10-12 21:39:59] 2025-10-13 01:39:12,800 | INFO     | mean x: 1760311252.6975806
[2025-10-12 21:39:59] 2025-10-13 01:39:12,800 | INFO     | mean y: 2271983.25
[2025-10-12 21:39:59] 2025-10-13 01:39:12,801 | INFO     | -- intersect: -19659233316.80641
[2025-10-12 21:39:59] 2025-10-13 01:39:12,801 | INFO     | intersect: -19659233316.80641
[2025-10-12 21:39:59] 2025-10-13 01:39:12,801 | INFO     | chi2: 0.11812309698085031
[2025-10-12 21:39:59] 2025-10-13 01:39:12,801 | INFO     | -- intersect: -19659233316.80641
[2025-10-12 21:39:59] 2025-10-13 01:39:12,801 | INFO     | current memory leak: 11.17 B/s (using 248 data points, chi2=0.12)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | could have reported an average CPU frequency of 2926 MHz (13 samples)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | ..............................
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . Timing measurements:
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . get job = 0 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . initial setup = 2 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . payload setup = 10 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . stage-in = 0 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . payload execution = 17021 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,802 | INFO     | . stage-out = 5 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,810 | INFO     | . log creation = 1 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,811 | INFO     | ..............................
[2025-10-12 21:39:59] 2025-10-13 01:39:12,929 | INFO     | 
[2025-10-12 21:39:59] 2025-10-13 01:39:12,929 | INFO     | job summary report
[2025-10-12 21:39:59] 2025-10-13 01:39:12,929 | INFO     | --------------------------------------------------
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | PanDA job id: 6840429762
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | task id: 46676269
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | errors: (none)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | pilot state: finished 
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | transexitcode: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | exeerrorcode: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | exeerrordiag: 
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | exitcode: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | exitmsg: OK
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | cpuconsumptiontime: 42553 s
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | nevents: 400
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | neventsw: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | pid: 1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | pgrp: 1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:12,930 | INFO     | corecount: 9
[2025-10-12 21:39:59] 2025-10-13 01:39:12,931 | INFO     | event service: False
[2025-10-12 21:39:59] 2025-10-13 01:39:12,931 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 17036: 2381166, 17042: 2390164, 17044: 2390348, 17074: 2390542}
[2025-10-12 21:39:59] 2025-10-13 01:39:12,931 | INFO     | --------------------------------------------------
[2025-10-12 21:39:59] 2025-10-13 01:39:12,931 | INFO     | 
[2025-10-12 21:39:59] 2025-10-13 01:39:12,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:39:59] 2025-10-13 01:39:12,991 | INFO     | job 6840429762 has completed (purged errors)
[2025-10-12 21:39:59] 2025-10-13 01:39:12,992 | INFO     | overall cleanup function is called
[2025-10-12 21:39:59] 2025-10-13 01:39:14,017 | INFO     | --- collectZombieJob: --- 10, [1815349]
[2025-10-12 21:39:59] 2025-10-13 01:39:14,018 | INFO     | zombie collector waiting for pid 1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:14,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:39:59] 2025-10-13 01:39:14,018 | INFO     | collected zombie processes
[2025-10-12 21:39:59] 2025-10-13 01:39:14,018 | INFO     | will attempt to kill all subprocesses of pid=1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:15,043 | INFO     | process IDs to be killed: [1815349] (in reverse order)
[2025-10-12 21:39:59] 2025-10-13 01:39:15,450 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:39:59] 2025-10-13 01:39:15,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:39:59] 2025-10-13 01:39:15,484 | INFO     | did not find any defunct processes belonging to 1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:15,511 | INFO     | did not find any defunct processes belonging to 1815349
[2025-10-12 21:39:59] 2025-10-13 01:39:15,512 | INFO     | ready for new job
[2025-10-12 21:39:59] 2025-10-13 01:39:15,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:39:59] 2025-10-13 01:39:15,514 | INFO     | ***************************************
[2025-10-12 21:39:59] 2025-10-13 01:39:15,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:39:59] 2025-10-13 01:39:15,519 | INFO     | ***************************************
[2025-10-12 21:39:59] 2025-10-13 01:39:15,519 | INFO     | 
[2025-10-12 21:39:59] 2025-10-13 01:39:15,537 | INFO     | architecture information:
[2025-10-12 21:39:59] 2025-10-13 01:39:15,542 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:39:59] 2025-10-13 01:39:15,584 | INFO     | cat /etc/os-release:
[2025-10-12 21:39:59] NAME="CentOS Linux"
[2025-10-12 21:39:59] VERSION="7 (Core)"
[2025-10-12 21:39:59] ID="centos"
[2025-10-12 21:39:59] ID_LIKE="rhel fedora"
[2025-10-12 21:39:59] VERSION_ID="7"
[2025-10-12 21:39:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:39:59] ANSI_COLOR="0;31"
[2025-10-12 21:39:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:39:59] HOME_URL="https://www.centos.org/"
[2025-10-12 21:39:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:39:59] 
[2025-10-12 21:39:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:39:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:39:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:39:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:39:59] 
[2025-10-12 21:39:59] 2025-10-13 01:39:15,584 | INFO     | ***************************************
[2025-10-12 21:39:59] 2025-10-13 01:39:16,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:39:59] 2025-10-13 01:39:16,257 | INFO     | sufficient remaining disk space (57559482368 B)
[2025-10-12 21:39:59] 2025-10-13 01:39:16,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:39:59] 2025-10-13 01:39:16,259 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:39:59] 2025-10-13 01:39:16,259 | INFO     | update_server=False
[2025-10-12 21:39:59] 2025-10-13 01:39:16,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:39:59] 2025-10-13 01:39:16,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:39:59] 2025-10-13 01:39:16,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:39:59] 2025-10-13 01:39:17,169 | INFO     | all payload control threads have been joined
[2025-10-12 21:39:59] 2025-10-13 01:39:17,198 | INFO     | all job control threads have been joined
[2025-10-12 21:39:59] 2025-10-13 01:39:17,244 | INFO     | all data control threads have been joined
[2025-10-12 21:39:59] 2025-10-13 01:39:17,265 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:17,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:59] 2025-10-13 01:39:17,268 | INFO     | aborting loop
[2025-10-12 21:39:59] 2025-10-13 01:39:17,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:17,983 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:17,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:59] 2025-10-13 01:39:17,992 | INFO     | [job] validate thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,019 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,178 | INFO     | [payload] control thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,205 | INFO     | [job] control thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,251 | INFO     | [data] control thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,274 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,458 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,464 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,563 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,575 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,719 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:18,990 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:20,269 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:39:59] 2025-10-13 01:39:20,716 [wrapper] supervise_pilot (15 min periods counter: 20)
[2025-10-12 21:39:59] 2025-10-13 01:39:46,511 | INFO     | PID=1799617 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:39:59] 2025-10-13 01:39:46,511 | INFO     | .. there are 30 such processes running
[2025-10-12 21:39:59] 2025-10-13 01:39:46,512 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:39:59] 2025-10-13 01:39:46,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:39:59] 2025-10-13 01:39:46,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:39:59] 2025-10-13 01:39:52,383 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:39:59] 2025-10-13 01:39:52,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399180523328)>', '<ExcThread(monitor, started 140398387263232)>']
[2025-10-12 21:39:59] 2025-10-13 01:39:53,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:39:59] 2025-10-13 01:39:53,561 | INFO     | [monitor] control thread has ended
[2025-10-12 21:39:59] 2025-10-13 01:39:57,701 | INFO     | all workflow threads have been joined
[2025-10-12 21:39:59] 2025-10-13 01:39:57,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:39:59] 2025-10-13 01:39:57,703 | INFO     | traces error code: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:57,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:39:59] 2025-10-13 01:39:58,315 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:39:59] 2025-10-13 01:39:58,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:39:59] 2025-10-13 01:39:58,436 [wrapper] pilotpid: 1799617
[2025-10-12 21:39:59] 2025-10-13 01:39:58,439 [wrapper] Pilot exit status: 0
[2025-10-12 21:39:59] 2025-10-13 01:39:58,518 [wrapper] pandaids: 6840429762
[2025-10-12 21:39:59] 2025-10-13 01:39:58,768 [wrapper] cleanup supervisor_pilot 2850548 1799618
[2025-10-12 21:39:59] 2025-10-13 01:39:58,772 [wrapper] Test setup, not cleaning
[2025-10-12 21:39:59] 2025-10-13 01:39:58,814 [wrapper] apfmon messages muted
[2025-10-12 21:39:59] 2025-10-13 01:39:58,831 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:39:59] 2025-10-13 01:39:58,848 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:39:59]  *** Error codes and diagnostics ***
[2025-10-12 21:39:59]     "exeErrorCode": 0,
[2025-10-12 21:39:59]     "exeErrorDiag": "",
[2025-10-12 21:39:59]     "pilotErrorCode": 0,
[2025-10-12 21:39:59]     "pilotErrorDiag": "",
[2025-10-12 21:39:59]  *** Listing of results directory ***
[2025-10-12 21:39:59] total 418356
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:17 pilot3.tar.gz
[2025-10-12 21:39:59] -rwx------. 1 boincer umatlas     36292 Oct 12 13:30 runpilot2-wrapper.sh
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:31 queuedata.json
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:39:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:54 run_atlas
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:54 job.xml
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas 221191636 Oct 12 16:54 EVNT.46676267._004820.pool.root.1
[2025-10-12 21:39:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:54 shared
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:54 input.tar.gz
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:54 start_atlas.sh
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:54 boinc_lockfile
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:54 pandaJob.out
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas    975536 Oct 12 16:54 agis_schedconf.cvmfs.json
[2025-10-12 21:39:59] drwx------. 5 boincer umatlas      4096 Oct 12 16:54 pilot3
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas 197914566 Oct 12 21:36 HITS.46676269._084875.pool.root.1
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas       530 Oct 12 21:36 boinc_task_state.xml
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 21:38 init_data.xml
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas      1043 Oct 12 21:38 memory_monitor_summary.json
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas    500898 Oct 12 21:38 log.46676269._084875.job.log.tgz.1
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas        95 Oct 12 21:38 pilot_heartbeat.json
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas      7832 Oct 12 21:39 heartbeat.json
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas      4824 Oct 12 21:39 pilotlog.txt
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:39 boinc_mmap_file
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:39 wrapper_checkpoint.txt
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas   2193933 Oct 12 21:39 log.46676269._084875.job.log.1
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas       357 Oct 12 21:39 output.list
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:39 runtime_log
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas   2713600 Oct 12 21:39 result.tar.gz
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 21:39 runtime_log.err
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas       657 Oct 12 21:39 aFONDmT5ES8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8WUMDmyIP0mn.diag
[2025-10-12 21:39:59] -rw-r--r--. 1 boincer umatlas     20989 Oct 12 21:39 stderr.txt
[2025-10-12 21:39:59] HITS file was successfully produced:
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas 197914566 Oct 12 21:36 shared/HITS.pool.root.1
[2025-10-12 21:39:59]  *** Contents of shared directory: ***
[2025-10-12 21:39:59] total 412516
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas 221191636 Oct 12 16:54 ATLAS.root_0
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:54 input.tar.gz
[2025-10-12 21:39:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:54 start_atlas.sh
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas 197914566 Oct 12 21:36 HITS.pool.root.1
[2025-10-12 21:39:59] -rw-------. 1 boincer umatlas   2713600 Oct 12 21:39 result.tar.gz
21:40:00 (1795768): run_atlas exited; CPU time 43080.844510
21:40:00 (1795768): called boinc_finish(0)

</stderr_txt>
]]>

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