Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:49:36 (31899): wrapper (7.7.26015): starting
16:49:36 (31899): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:49:36] Arguments: --nthreads 8
[2025-10-12 16:49:36] Threads: 8
[2025-10-12 16:49:36] Checking for CVMFS
[2025-10-12 16:49:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:49:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:49:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:49:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:49:36] 2.11.2.0 3733 53401 124904 151636 0 59 14644125 18432001 1833 130560 0 48283980 99.975 2397297 39130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:49:36] CVMFS is ok
[2025-10-12 16:49:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:49:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:49:36] Further information can be found at the LHC@home message board.
[2025-10-12 16:49:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:49:36] Checking for apptainer binary...
[2025-10-12 16:49:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:49:36] Running /usr/bin/apptainer --version
[2025-10-12 16:49:36] apptainer version 1.3.2-1.el7
[2025-10-12 16:49:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:49:37] c-206-23.aglt2.org
[2025-10-12 16:49:37] apptainer works
[2025-10-12 16:49:37] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:49:37] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:49:37] Starting ATLAS job with PandaID=6840181292
[2025-10-12 16:49:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:41:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:41:09] 2025-10-12 23:40:15,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:41:09] 2025-10-12 23:40:15,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:41:09] 2025-10-12 23:40:15,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:41:09] 2025-10-12 23:40:15,235 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:41:09] 2025-10-12 23:40:15,235 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,236 | INFO     | sum of deviations: -3856011635.499996
[2025-10-12 19:41:09] 2025-10-12 23:40:15,236 | INFO     | mean x: 1760307305.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,237 | INFO     | mean y: 2470578.755952381
[2025-10-12 19:41:09] 2025-10-12 23:40:15,237 | INFO     | -- intersect: 4619216196.335002
[2025-10-12 19:41:09] 2025-10-12 23:40:15,237 | INFO     | intersect: 4619216196.335002
[2025-10-12 19:41:09] 2025-10-12 23:40:15,237 | INFO     | chi2: 2.2365068590440282
[2025-10-12 19:41:09] 2025-10-12 23:40:15,238 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,239 | INFO     | sum of deviations: 7108233436.999997
[2025-10-12 19:41:09] 2025-10-12 23:40:15,239 | INFO     | mean x: 1760307153.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,239 | INFO     | mean y: 2483383.926380368
[2025-10-12 19:41:09] 2025-10-12 23:40:15,240 | INFO     | -- intersect: -9315571079.035843
[2025-10-12 19:41:09] 2025-10-12 23:40:15,240 | INFO     | intersect: -9315571079.035843
[2025-10-12 19:41:09] 2025-10-12 23:40:15,240 | INFO     | chi2: 1.4684895714787518
[2025-10-12 19:41:09] 2025-10-12 23:40:15,240 | INFO     | current chi2=1.4684895714787518 (change=34.34003720845093 %)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,241 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,242 | INFO     | sum of deviations: 6875662518.999997
[2025-10-12 19:41:09] 2025-10-12 23:40:15,242 | INFO     | mean x: 1760307000.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,242 | INFO     | mean y: 2483088.518987342
[2025-10-12 19:41:09] 2025-10-12 23:40:15,243 | INFO     | -- intersect: -9893767421.526728
[2025-10-12 19:41:09] 2025-10-12 23:40:15,243 | INFO     | intersect: -9893767421.526728
[2025-10-12 19:41:09] 2025-10-12 23:40:15,243 | INFO     | chi2: 1.469453326526172
[2025-10-12 19:41:09] 2025-10-12 23:40:15,243 | INFO     | current chi2=1.469453326526172 (change=-0.06562900180827974 %)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,243 | INFO     | right removable region: 157
[2025-10-12 19:41:09] 2025-10-12 23:40:15,244 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,245 | INFO     | sum of deviations: -27061472517.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,245 | INFO     | mean x: 1760307458.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,246 | INFO     | mean y: 2497945.773006135
[2025-10-12 19:41:09] 2025-10-12 23:40:15,246 | INFO     | -- intersect: 35476898257.30657
[2025-10-12 19:41:09] 2025-10-12 23:40:15,246 | INFO     | intersect: 35476898257.30657
[2025-10-12 19:41:09] 2025-10-12 23:40:15,246 | INFO     | chi2: 0.9008261844841507
[2025-10-12 19:41:09] 2025-10-12 23:40:15,247 | INFO     | current chi2=0.9008261844841507 (change=59.72173387971635 %)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,247 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,248 | INFO     | sum of deviations: -22341936463.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,248 | INFO     | mean x: 1760307610.5
[2025-10-12 19:41:09] 2025-10-12 23:40:15,249 | INFO     | mean y: 2491928.905063291
[2025-10-12 19:41:09] 2025-10-12 23:40:15,249 | INFO     | -- intersect: 32159607862.054237
[2025-10-12 19:41:09] 2025-10-12 23:40:15,249 | INFO     | intersect: 32159607862.054237
[2025-10-12 19:41:09] 2025-10-12 23:40:15,249 | INFO     | chi2: 0.889866132720364
[2025-10-12 19:41:09] 2025-10-12 23:40:15,249 | INFO     | current chi2=0.889866132720364 (change=1.2166666502997965 %)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,250 | INFO     | left removable region: 20
[2025-10-12 19:41:09] 2025-10-12 23:40:15,250 | INFO     | sum of square deviations: 797291228.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,251 | INFO     | sum of deviations: -680225883.9999996
[2025-10-12 19:41:09] 2025-10-12 23:40:15,251 | INFO     | mean x: 1760307580.0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,251 | INFO     | mean y: 2489814.693430657
[2025-10-12 19:41:09] 2025-10-12 23:40:15,252 | INFO     | -- intersect: 1504333479.4244318
[2025-10-12 19:41:09] 2025-10-12 23:40:15,252 | INFO     | intersect: 1504333479.4244318
[2025-10-12 19:41:09] 2025-10-12 23:40:15,252 | INFO     | chi2: 0.023205898899586713
[2025-10-12 19:41:09] 2025-10-12 23:40:15,252 | INFO     | -- intersect: 1504333479.4244318
[2025-10-12 19:41:09] 2025-10-12 23:40:15,253 | INFO     | current memory leak: -0.85 B/s (using 137 data points, chi2=0.02)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,253 | INFO     | could have reported an average CPU frequency of 2564 MHz (9 samples)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,253 | INFO     | ..............................
[2025-10-12 19:41:09] 2025-10-12 23:40:15,253 | INFO     | . Timing measurements:
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . get job = 0 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . initial setup = 2 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . payload setup = 4 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . stage-in = 0 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . payload execution = 10196 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,254 | INFO     | . stage-out = 0 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,255 | INFO     | . log creation = 0 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,255 | INFO     | ..............................
[2025-10-12 19:41:09] 2025-10-12 23:40:15,419 | INFO     | 
[2025-10-12 19:41:09] 2025-10-12 23:40:15,419 | INFO     | job summary report
[2025-10-12 19:41:09] 2025-10-12 23:40:15,419 | INFO     | --------------------------------------------------
[2025-10-12 19:41:09] 2025-10-12 23:40:15,419 | INFO     | PanDA job id: 6840181292
[2025-10-12 19:41:09] 2025-10-12 23:40:15,419 | INFO     | task id: 46676269
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | errors: (none)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | pilot state: finished 
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | transexitcode: 0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | exeerrorcode: 0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,420 | INFO     | exeerrordiag: 
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | exitcode: 0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | exitmsg: OK
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | cpuconsumptiontime: 77603 s
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | nevents: 400
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | neventsw: 0
[2025-10-12 19:41:09] 2025-10-12 23:40:15,421 | INFO     | pid: 9797
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | pgrp: 9797
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | corecount: 8
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | event service: False
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | sizes: {0: 2348579, 1: 2348834, 4: 2349096, 12: 2349124, 10204: 2377841, 10206: 2387023, 10213: 2387225}
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | --------------------------------------------------
[2025-10-12 19:41:09] 2025-10-12 23:40:15,422 | INFO     | 
[2025-10-12 19:41:09] 2025-10-12 23:40:15,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 19:41:09] 2025-10-12 23:40:15,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:41:09] 2025-10-12 23:40:15,445 | INFO     | job 6840181292 has completed (purged errors)
[2025-10-12 19:41:09] 2025-10-12 23:40:15,446 | INFO     | overall cleanup function is called
[2025-10-12 19:41:09] 2025-10-12 23:40:16,453 | INFO     | --- collectZombieJob: --- 10, [9797]
[2025-10-12 19:41:09] 2025-10-12 23:40:16,454 | INFO     | zombie collector waiting for pid 9797
[2025-10-12 19:41:09] 2025-10-12 23:40:16,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:41:09] 2025-10-12 23:40:16,454 | INFO     | collected zombie processes
[2025-10-12 19:41:09] 2025-10-12 23:40:16,454 | INFO     | will attempt to kill all subprocesses of pid=9797
[2025-10-12 19:41:09] 2025-10-12 23:40:16,590 | INFO     | process IDs to be killed: [9797] (in reverse order)
[2025-10-12 19:41:09] 2025-10-12 23:40:16,628 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:41:09] 2025-10-12 23:40:16,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:41:09] 2025-10-12 23:40:16,631 | INFO     | did not find any defunct processes belonging to 9797
[2025-10-12 19:41:09] 2025-10-12 23:40:16,633 | INFO     | did not find any defunct processes belonging to 9797
[2025-10-12 19:41:09] 2025-10-12 23:40:16,633 | INFO     | ready for new job
[2025-10-12 19:41:09] 2025-10-12 23:40:16,633 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:41:09] 2025-10-12 23:40:16,635 | INFO     | ***************************************
[2025-10-12 19:41:09] 2025-10-12 23:40:16,635 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:41:09] 2025-10-12 23:40:16,635 | INFO     | ***************************************
[2025-10-12 19:41:09] 2025-10-12 23:40:16,635 | INFO     | 
[2025-10-12 19:41:09] 2025-10-12 23:40:16,636 | INFO     | architecture information:
[2025-10-12 19:41:09] 2025-10-12 23:40:16,636 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:41:09] 2025-10-12 23:40:16,645 | INFO     | cat /etc/os-release:
[2025-10-12 19:41:09] NAME="CentOS Linux"
[2025-10-12 19:41:09] VERSION="7 (Core)"
[2025-10-12 19:41:09] ID="centos"
[2025-10-12 19:41:09] ID_LIKE="rhel fedora"
[2025-10-12 19:41:09] VERSION_ID="7"
[2025-10-12 19:41:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:41:09] ANSI_COLOR="0;31"
[2025-10-12 19:41:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:41:09] HOME_URL="https://www.centos.org/"
[2025-10-12 19:41:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:41:09] 
[2025-10-12 19:41:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:41:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:41:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:41:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:41:09] 
[2025-10-12 19:41:09] 2025-10-12 23:40:16,645 | INFO     | ***************************************
[2025-10-12 19:41:09] 2025-10-12 23:40:17,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 19:41:09] 2025-10-12 23:40:17,167 | INFO     | sufficient remaining disk space (28108128256 B)
[2025-10-12 19:41:09] 2025-10-12 23:40:17,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:41:09] 2025-10-12 23:40:17,167 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:41:09] 2025-10-12 23:40:17,167 | INFO     | update_server=False
[2025-10-12 19:41:09] 2025-10-12 23:40:17,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:41:09] 2025-10-12 23:40:17,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:41:09] 2025-10-12 23:40:17,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:41:09] 2025-10-12 23:40:17,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:41:09] 2025-10-12 23:40:17,169 | INFO     | aborting loop
[2025-10-12 19:41:09] 2025-10-12 23:40:18,130 | INFO     | all data control threads have been joined
[2025-10-12 19:41:09] 2025-10-12 23:40:18,151 | INFO     | all job control threads have been joined
[2025-10-12 19:41:09] 2025-10-12 23:40:18,173 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:18,173 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:18,174 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:18,199 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:18,397 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:18,515 | INFO     | all payload control threads have been joined
[2025-10-12 19:41:09] 2025-10-12 23:40:19,136 | INFO     | [data] control thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,157 | INFO     | [job] control thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,173 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,179 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,330 | INFO     | [job] validate thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,336 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:41:09] 2025-10-12 23:40:19,411 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,521 | INFO     | [payload] control thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:19,647 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:23,406 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:41:09] 2025-10-12 23:40:46,663 | INFO     | PID=3246 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 19:41:09] 2025-10-12 23:40:46,664 | INFO     | .. there are 3 such processes running
[2025-10-12 19:41:09] 2025-10-12 23:40:46,664 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:41:09] 2025-10-12 23:40:46,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:41:09] 2025-10-12 23:40:46,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:41:09] 2025-10-12 23:41:03,754 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:41:09] 2025-10-12 23:41:04,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746937866048)>', '<ExcThread(monitor, started 139746273646336)>']
[2025-10-12 19:41:09] 2025-10-12 23:41:04,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:41:09] 2025-10-12 23:41:04,760 | INFO     | [monitor] control thread has ended
[2025-10-12 19:41:09] 2025-10-12 23:41:09,577 | INFO     | all workflow threads have been joined
[2025-10-12 19:41:09] 2025-10-12 23:41:09,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:41:09] 2025-10-12 23:41:09,578 | INFO     | traces error code: 0
[2025-10-12 19:41:09] 2025-10-12 23:41:09,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:41:09] 2025-10-12 23:41:09,693 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:41:09] 2025-10-12 23:41:09,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:41:09] 2025-10-12 23:41:09,698 [wrapper] pilotpid: 3246
[2025-10-12 19:41:09] 2025-10-12 23:41:09,700 [wrapper] Pilot exit status: 0
[2025-10-12 19:41:09] 2025-10-12 23:41:09,710 [wrapper] pandaids: 6840181292
[2025-10-12 19:41:09] 2025-10-12 23:41:09,743 [wrapper] cleanup supervisor_pilot  4686 3247
[2025-10-12 19:41:09] 2025-10-12 23:41:09,745 [wrapper] Test setup, not cleaning
[2025-10-12 19:41:09] 2025-10-12 23:41:09,747 [wrapper] apfmon messages muted
[2025-10-12 19:41:09] 2025-10-12 23:41:09,750 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:41:09] 2025-10-12 23:41:09,751 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:41:09]  *** Error codes and diagnostics ***
[2025-10-12 19:41:09]     "exeErrorCode": 0,
[2025-10-12 19:41:09]     "exeErrorDiag": "",
[2025-10-12 19:41:09]     "pilotErrorCode": 0,
[2025-10-12 19:41:09]     "pilotErrorDiag": "",
[2025-10-12 19:41:09]  *** Listing of results directory ***
[2025-10-12 19:41:09] total 407216
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:08 queuedata.json
[2025-10-12 19:41:09] -rwx------ 1 boincer umatlas     36292 Oct 12 10:08 runpilot2-wrapper.sh
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:41:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:49 run_atlas
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:49 job.xml
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas 219492056 Oct 12 16:49 EVNT.46676267._004211.pool.root.1
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:49 start_atlas.sh
[2025-10-12 19:41:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:49 shared
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 16:49 input.tar.gz
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:49 boinc_lockfile
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 16:49 pandaJob.out
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas    975536 Oct 12 16:49 agis_schedconf.cvmfs.json
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas   1560580 Oct 12 16:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:41:09] drwx------ 5 boincer umatlas      4096 Oct 12 16:49 pilot3
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 19:36 init_data.xml
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas 189906764 Oct 12 19:39 HITS.46676269._080251.pool.root.1
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas       530 Oct 12 19:39 boinc_task_state.xml
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas      1056 Oct 12 19:40 memory_monitor_summary.json
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas    411406 Oct 12 19:40 log.46676269._080251.job.log.tgz.1
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas        95 Oct 12 19:40 pilot_heartbeat.json
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas      7859 Oct 12 19:40 heartbeat.json
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 19:40 boinc_mmap_file
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas        28 Oct 12 19:40 wrapper_checkpoint.txt
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas      4820 Oct 12 19:41 pilotlog.txt
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas   1435541 Oct 12 19:41 log.46676269._080251.job.log.1
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas       357 Oct 12 19:41 output.list
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 19:41 runtime_log
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas   1863680 Oct 12 19:41 result.tar.gz
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 19:41 runtime_log.err
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas       661 Oct 12 19:41 gieKDmavBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcAkNDmteGrMn.diag
[2025-10-12 19:41:09] -rw-r--r-- 1 boincer umatlas     20842 Oct 12 19:41 stderr.txt
[2025-10-12 19:41:09] HITS file was successfully produced:
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas 189906764 Oct 12 19:39 shared/HITS.pool.root.1
[2025-10-12 19:41:09]  *** Contents of shared directory: ***
[2025-10-12 19:41:09] total 402204
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas 219492056 Oct 12 16:49 ATLAS.root_0
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:49 start_atlas.sh
[2025-10-12 19:41:09] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 16:49 input.tar.gz
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas 189906764 Oct 12 19:39 HITS.pool.root.1
[2025-10-12 19:41:09] -rw------- 1 boincer umatlas   1863680 Oct 12 19:41 result.tar.gz
19:41:11 (31899): run_atlas exited; CPU time 77746.315722
19:41:11 (31899): called boinc_finish(0)

</stderr_txt>
]]>

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