Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
15:04:11 (1128268): wrapper (7.7.26015): starting
15:04:11 (1128268): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 15:04:11] Arguments: --nthreads 4
[2025-10-12 15:04:11] Threads: 4
[2025-10-12 15:04:11] Checking for CVMFS
[2025-10-12 15:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:04:11] 2.11.3.0 1528564 4944 67092 151636 2 188 2869853 4096001 5502 130560 0 21609739 99.998 165928 680 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 15:04:11] CVMFS is ok
[2025-10-12 15:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:04:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 15:04:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 15:04:11] Further information can be found at the LHC@home message board.
[2025-10-12 15:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:04:11] Checking for apptainer binary...
[2025-10-12 15:04:11] apptainer is not installed, using version from CVMFS
[2025-10-12 15:04:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:04:12] officedc-System-Product-Name
[2025-10-12 15:04:12] apptainer works
[2025-10-12 15:04:12] Set ATHENA_PROC_NUMBER=4
[2025-10-12 15:04:12] Set ATHENA_CORE_NUMBER=4
[2025-10-12 15:04:12] Starting ATLAS job with PandaID=6839987999
[2025-10-12 15:04:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:59:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:59:39] 2025-10-12 22:59:00,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:59:39] 2025-10-12 22:59:00,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:59:39] 2025-10-12 22:59:00,405 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:59:39] 2025-10-12 22:59:00,405 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | sum of deviations: 5825055859.000001
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | mean x: 1760306499.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | mean y: 2266709.6017699116
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | -- intersect: -22917418328.679523
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | intersect: -22917418328.679523
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | chi2: 2.1420537002878337
[2025-10-12 16:59:39] 2025-10-12 22:59:00,406 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | sum of deviations: 12360810243.5
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | mean x: 1760306346.5
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | mean y: 2283581.972222222
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | -- intersect: -55706379868.52454
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | intersect: -55706379868.52454
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | chi2: 1.3405774319959454
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | current chi2=1.3405774319959454 (change=37.41625469913251 %)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,407 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | sum of deviations: 11738569038.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | mean x: 1760306194.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | mean y: 2281747.669902913
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | -- intersect: -60987097892.21994
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | intersect: -60987097892.21994
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | chi2: 1.3430910571614505
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | current chi2=1.3430910571614505 (change=-0.18750316882201037 %)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,408 | INFO     | right removable region: 102
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | sum of deviations: -6693840124.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | mean x: 1760306651.5
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | mean y: 2299376.203703704
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | -- intersect: 30170625232.26295
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | intersect: 30170625232.26295
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | chi2: 0.8412103971718152
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | current chi2=0.8412103971718152 (change=60.72879045661743 %)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,409 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | sum of deviations: -5715965655.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | mean x: 1760306804.0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | mean y: 2296485.776699029
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | -- intersect: 29700406963.977848
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | intersect: 29700406963.977848
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | chi2: 0.8407381415233123
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | current chi2=0.8407381415233123 (change=0.05614001563588538 %)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | left removable region: 20
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | sum of square deviations: 170944600.5
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | sum of deviations: 245847354.49999997
[2025-10-12 16:59:39] 2025-10-12 22:59:00,410 | INFO     | mean x: 1760306773.5
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | mean y: 2318041.5975609757
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | -- intersect: -2529301922.458605
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | intersect: -2529301922.458605
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | chi2: 0.0002072545193412219
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | -- intersect: -2529301922.458605
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | current memory leak: 1.44 B/s (using 82 data points, chi2=0.00)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | could have reported an average CPU frequency of 3983 MHz (7 samples)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | ..............................
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | . Timing measurements:
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | . get job = 0 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,411 | INFO     | . initial setup = 2 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | . payload setup = 4 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | . stage-in = 0 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | . payload execution = 6848 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | . stage-out = 0 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | . log creation = 0 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,412 | INFO     | ..............................
[2025-10-12 16:59:39] 2025-10-12 22:59:00,900 | INFO     | 
[2025-10-12 16:59:39] 2025-10-12 22:59:00,900 | INFO     | job summary report
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | --------------------------------------------------
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | PanDA job id: 6839987999
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | task id: 46676269
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | errors: (none)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | pilot state: finished 
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | transexitcode: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | exeerrorcode: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | exeerrordiag: 
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | exitcode: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | exitmsg: OK
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | cpuconsumptiontime: 26452 s
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | nevents: 400
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | neventsw: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | pid: 1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | pgrp: 1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | corecount: 4
[2025-10-12 16:59:39] 2025-10-12 22:59:00,901 | INFO     | event service: False
[2025-10-12 16:59:39] 2025-10-12 22:59:00,902 | INFO     | sizes: {0: 2348858, 3: 2349120, 11: 2349148, 6856: 2376466, 6857: 2385466, 6860: 2385522, 6865: 2385844}
[2025-10-12 16:59:39] 2025-10-12 22:59:00,902 | INFO     | --------------------------------------------------
[2025-10-12 16:59:39] 2025-10-12 22:59:00,902 | INFO     | 
[2025-10-12 16:59:39] 2025-10-12 22:59:00,902 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/3
[2025-10-12 16:59:39] 2025-10-12 22:59:00,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:59:39] 2025-10-12 22:59:00,934 | INFO     | job 6839987999 has completed (purged errors)
[2025-10-12 16:59:39] 2025-10-12 22:59:00,934 | INFO     | overall cleanup function is called
[2025-10-12 16:59:39] 2025-10-12 22:59:01,943 | INFO     | --- collectZombieJob: --- 10, [1138747]
[2025-10-12 16:59:39] 2025-10-12 22:59:01,943 | INFO     | zombie collector waiting for pid 1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:01,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:59:39] 2025-10-12 22:59:01,943 | INFO     | collected zombie processes
[2025-10-12 16:59:39] 2025-10-12 22:59:01,943 | INFO     | will attempt to kill all subprocesses of pid=1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:02,081 | INFO     | process IDs to be killed: [1138747] (in reverse order)
[2025-10-12 16:59:39] 2025-10-12 22:59:02,144 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:59:39] 2025-10-12 22:59:02,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:59:39] 2025-10-12 22:59:02,148 | INFO     | did not find any defunct processes belonging to 1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:02,151 | INFO     | did not find any defunct processes belonging to 1138747
[2025-10-12 16:59:39] 2025-10-12 22:59:02,152 | INFO     | ready for new job
[2025-10-12 16:59:39] 2025-10-12 22:59:02,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:59:39] 2025-10-12 22:59:02,153 | INFO     | ***************************************
[2025-10-12 16:59:39] 2025-10-12 22:59:02,153 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:59:39] 2025-10-12 22:59:02,153 | INFO     | ***************************************
[2025-10-12 16:59:39] 2025-10-12 22:59:02,153 | INFO     | 
[2025-10-12 16:59:39] 2025-10-12 22:59:02,155 | INFO     | architecture information:
[2025-10-12 16:59:39] 2025-10-12 22:59:02,155 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:59:39] 2025-10-12 22:59:02,166 | INFO     | cat /etc/os-release:
[2025-10-12 16:59:39] NAME="CentOS Linux"
[2025-10-12 16:59:39] VERSION="7 (Core)"
[2025-10-12 16:59:39] ID="centos"
[2025-10-12 16:59:39] ID_LIKE="rhel fedora"
[2025-10-12 16:59:39] VERSION_ID="7"
[2025-10-12 16:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:59:39] ANSI_COLOR="0;31"
[2025-10-12 16:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:59:39] HOME_URL="https://www.centos.org/"
[2025-10-12 16:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:59:39] 
[2025-10-12 16:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:59:39] 
[2025-10-12 16:59:39] 2025-10-12 22:59:02,166 | INFO     | ***************************************
[2025-10-12 16:59:39] 2025-10-12 22:59:02,669 | INFO     | executing command: df -mP /var/lib/boinc3/slots/3
[2025-10-12 16:59:39] 2025-10-12 22:59:02,684 | INFO     | sufficient remaining disk space (377077366784 B)
[2025-10-12 16:59:39] 2025-10-12 22:59:02,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:59:39] 2025-10-12 22:59:02,684 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:59:39] 2025-10-12 22:59:02,684 | INFO     | update_server=False
[2025-10-12 16:59:39] 2025-10-12 22:59:02,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:59:39] 2025-10-12 22:59:02,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:59:39] 2025-10-12 22:59:02,685 | INFO     | aborting loop
[2025-10-12 16:59:39] 2025-10-12 22:59:02,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:59:39] 2025-10-12 22:59:02,898 | INFO     | all data control threads have been joined
[2025-10-12 16:59:39] 2025-10-12 22:59:03,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:59:39] 2025-10-12 22:59:03,689 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:03,690 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:03,693 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:03,761 | INFO     | all payload control threads have been joined
[2025-10-12 16:59:39] 2025-10-12 22:59:03,879 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:03,903 | INFO     | [data] control thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:04,322 | INFO     | all job control threads have been joined
[2025-10-12 16:59:39] 2025-10-12 22:59:04,371 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:04,766 | INFO     | [payload] control thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:04,854 | INFO     | [job] validate thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,033 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,139 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,183 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,326 | INFO     | [job] control thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:05,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:59:39] 2025-10-12 22:59:06,496 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:06,691 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:13,460 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:59:39] 2025-10-12 22:59:14,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:59:39] 2025-10-12 22:59:31,936 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:59:39] 2025-10-12 22:59:33,157 | INFO     | PID=1132099 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:59:39] 2025-10-12 22:59:33,157 | INFO     | .. there are 7 such processes running
[2025-10-12 16:59:39] 2025-10-12 22:59:33,158 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:59:39] 2025-10-12 22:59:33,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:59:39] 2025-10-12 22:59:33,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:59:39] 2025-10-12 22:59:33,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137357079492416)>', '<ExcThread(monitor, started 137356443105024)>']
[2025-10-12 16:59:39] 2025-10-12 22:59:34,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:59:39] 2025-10-12 22:59:34,163 | INFO     | [monitor] control thread has ended
[2025-10-12 16:59:39] 2025-10-12 22:59:38,983 | INFO     | all workflow threads have been joined
[2025-10-12 16:59:39] 2025-10-12 22:59:38,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:59:39] 2025-10-12 22:59:38,984 | INFO     | traces error code: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:38,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:59:39] 2025-10-12 22:59:39,072 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:59:39] 2025-10-12 22:59:39,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:59:39] 2025-10-12 22:59:39,076 [wrapper] pilotpid: 1132099
[2025-10-12 16:59:39] 2025-10-12 22:59:39,078 [wrapper] Pilot exit status: 0
[2025-10-12 16:59:39] 2025-10-12 22:59:39,085 [wrapper] pandaids: 6839987999
[2025-10-12 16:59:39] 2025-10-12 22:59:39,120 [wrapper] cleanup supervisor_pilot 1308703 1132100
[2025-10-12 16:59:39] 2025-10-12 22:59:39,123 [wrapper] Test setup, not cleaning
[2025-10-12 16:59:39] 2025-10-12 22:59:39,125 [wrapper] apfmon messages muted
[2025-10-12 16:59:39] 2025-10-12 22:59:39,127 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:59:39] 2025-10-12 22:59:39,130 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:59:39]  *** Error codes and diagnostics ***
[2025-10-12 16:59:39]     "exeErrorCode": 0,
[2025-10-12 16:59:39]     "exeErrorDiag": "",
[2025-10-12 16:59:39]     "pilotErrorCode": 0,
[2025-10-12 16:59:39]     "pilotErrorDiag": "",
[2025-10-12 16:59:39]  *** Listing of results directory ***
[2025-10-12 16:59:39] total 411716
[2025-10-12 16:59:39] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:35 pilot3.tar.gz
[2025-10-12 16:59:39] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:40 queuedata.json
[2025-10-12 16:59:39] -rwx------ 1 boinc boinc     36292 Oct 12 06:40 runpilot2-wrapper.sh
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc       100 Oct 12 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:59:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:04 run_atlas
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc       105 Oct 12 15:04 job.xml
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc      9753 Oct 12 15:04 init_data.xml
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc 219544045 Oct 12 15:04 EVNT.46676267._003796.pool.root.1
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:04 start_atlas.sh
[2025-10-12 16:59:39] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:04 shared
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:04 input.tar.gz
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc         0 Oct 12 15:04 boinc_lockfile
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 15:04 pandaJob.out
[2025-10-12 16:59:39] -rw------- 1 boinc boinc    975536 Oct 12 15:04 agis_schedconf.cvmfs.json
[2025-10-12 16:59:39] -rw------- 1 boinc boinc   1560580 Oct 12 15:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:59:39] drwx------ 5 boinc boinc      4096 Oct 12 15:04 pilot3
[2025-10-12 16:59:39] -rw------- 1 boinc boinc 195533671 Oct 12 16:58 HITS.46676269._078342.pool.root.1
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc       529 Oct 12 16:58 boinc_task_state.xml
[2025-10-12 16:59:39] -rw------- 1 boinc boinc        95 Oct 12 16:58 pilot_heartbeat.json
[2025-10-12 16:59:39] -rw------- 1 boinc boinc      1024 Oct 12 16:58 memory_monitor_summary.json
[2025-10-12 16:59:39] -rw------- 1 boinc boinc    299521 Oct 12 16:58 log.46676269._078342.job.log.tgz.1
[2025-10-12 16:59:39] -rw------- 1 boinc boinc      7775 Oct 12 16:59 heartbeat.json
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 16:59 boinc_mmap_file
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc        27 Oct 12 16:59 wrapper_checkpoint.txt
[2025-10-12 16:59:39] -rw------- 1 boinc boinc      4897 Oct 12 16:59 pilotlog.txt
[2025-10-12 16:59:39] -rw------- 1 boinc boinc   1003547 Oct 12 16:59 log.46676269._078342.job.log.1
[2025-10-12 16:59:39] -rw------- 1 boinc boinc       357 Oct 12 16:59 output.list
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc       620 Oct 12 16:59 runtime_log
[2025-10-12 16:59:39] -rw------- 1 boinc boinc   1320960 Oct 12 16:59 result.tar.gz
[2025-10-12 16:59:39] -rw------- 1 boinc boinc       657 Oct 12 16:59 YVGKDmJYAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNpjNDmeFaqSm.diag
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc      8755 Oct 12 16:59 runtime_log.err
[2025-10-12 16:59:39] -rw-rw-r-- 1 boinc boinc     20969 Oct 12 16:59 stderr.txt
[2025-10-12 16:59:39] HITS file was successfully produced:
[2025-10-12 16:59:39] -rw------- 1 boinc boinc 195533671 Oct 12 16:58 shared/HITS.pool.root.1
[2025-10-12 16:59:39]  *** Contents of shared directory: ***
[2025-10-12 16:59:39] total 407228
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc 219544045 Oct 12 15:04 ATLAS.root_0
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:04 start_atlas.sh
[2025-10-12 16:59:39] -rw-r--r-- 2 boinc boinc    569678 Oct 12 15:04 input.tar.gz
[2025-10-12 16:59:39] -rw------- 1 boinc boinc 195533671 Oct 12 16:58 HITS.pool.root.1
[2025-10-12 16:59:39] -rw------- 1 boinc boinc   1320960 Oct 12 16:59 result.tar.gz
16:59:40 (1128268): run_atlas exited; CPU time 26518.639470
16:59:40 (1128268): called boinc_finish(0)

</stderr_txt>
]]>

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