Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:28 (4159303): wrapper (7.7.26015): starting
17:20:28 (4159303): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:20:28] Arguments: --nthreads 8
[2025-10-12 17:20:28] Threads: 8
[2025-10-12 17:20:28] Checking for CVMFS
[2025-10-12 17:20:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:20:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:20:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:20:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:20:30] 2.13.2.0 5998 6212 103720 151638 2 130 39726651 40960000 20114 16776704 0 14554443 99.922 2516962 30115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:20:30] CVMFS is ok
[2025-10-12 17:20:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:20:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:20:30] Further information can be found at the LHC@home message board.
[2025-10-12 17:20:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:20:30] Checking for apptainer binary...
[2025-10-12 17:20:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:20:30] Running /usr/bin/apptainer --version
[2025-10-12 17:20:31] apptainer version 1.4.3-1.el9
[2025-10-12 17:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:20:31] c-211-33-1.aglt2.org
[2025-10-12 17:20:31] apptainer works
[2025-10-12 17:20:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:20:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:20:31] Starting ATLAS job with PandaID=6840711616
[2025-10-12 17:20:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:11:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:11:46] 2025-10-13 03:11:02,330 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2509.979677083333
[2025-10-12 23:11:46] 2025-10-13 03:11:02,380 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840711616/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,381 | INFO     | extracted standard info from prmon json
[2025-10-12 23:11:46] 2025-10-13 03:11:02,381 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:11:46] 2025-10-13 03:11:02,382 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:11:46] 2025-10-13 03:11:02,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:11:46] 2025-10-13 03:11:02,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:11:46] 2025-10-13 03:11:02,398 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:11:46] 2025-10-13 03:11:02,399 | INFO     | sum of square deviations: 12187785425.223478
[2025-10-12 23:11:46] 2025-10-13 03:11:02,406 | INFO     | sum of deviations: 51766957744.258766
[2025-10-12 23:11:46] 2025-10-13 03:11:02,406 | INFO     | mean x: 1760314618.8588235
[2025-10-12 23:11:46] 2025-10-13 03:11:02,407 | INFO     | mean y: 2487952.0470588235
[2025-10-12 23:11:46] 2025-10-13 03:11:02,407 | INFO     | -- intersect: -7474352943.303277
[2025-10-12 23:11:46] 2025-10-13 03:11:02,407 | INFO     | intersect: -7474352943.303277
[2025-10-12 23:11:46] 2025-10-13 03:11:02,408 | INFO     | chi2: 3.662025773893447
[2025-10-12 23:11:46] 2025-10-13 03:11:02,408 | INFO     | sum of square deviations: 11657925328.435835
[2025-10-12 23:11:46] 2025-10-13 03:11:02,417 | INFO     | sum of deviations: 73519723783.59404
[2025-10-12 23:11:46] 2025-10-13 03:11:02,417 | INFO     | mean x: 1760314466.352239
[2025-10-12 23:11:46] 2025-10-13 03:11:02,417 | INFO     | mean y: 2494135.2746268655
[2025-10-12 23:11:46] 2025-10-13 03:11:02,422 | INFO     | -- intersect: -11098780722.165686
[2025-10-12 23:11:46] 2025-10-13 03:11:02,422 | INFO     | intersect: -11098780722.165686
[2025-10-12 23:11:46] 2025-10-13 03:11:02,423 | INFO     | chi2: 2.8920620308039164
[2025-10-12 23:11:46] 2025-10-13 03:11:02,423 | INFO     | current chi2=2.8920620308039164 (change=21.0256232650954 %)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,423 | INFO     | right removable region: 334
[2025-10-12 23:11:46] 2025-10-13 03:11:02,424 | INFO     | sum of square deviations: 11657954247.295412
[2025-10-12 23:11:46] 2025-10-13 03:11:02,428 | INFO     | sum of deviations: -38660643380.059715
[2025-10-12 23:11:46] 2025-10-13 03:11:02,428 | INFO     | mean x: 1760314771.3611941
[2025-10-12 23:11:46] 2025-10-13 03:11:02,428 | INFO     | mean y: 2513922.149253731
[2025-10-12 23:11:46] 2025-10-13 03:11:02,429 | INFO     | -- intersect: 5840150626.550876
[2025-10-12 23:11:46] 2025-10-13 03:11:02,429 | INFO     | intersect: 5840150626.550876
[2025-10-12 23:11:46] 2025-10-13 03:11:02,429 | INFO     | chi2: 0.9352933058446096
[2025-10-12 23:11:46] 2025-10-13 03:11:02,429 | INFO     | current chi2=0.9352933058446096 (change=74.45967440993157 %)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,430 | INFO     | sum of square deviations: 11143725435.587923
[2025-10-12 23:11:46] 2025-10-13 03:11:02,437 | INFO     | sum of deviations: -50571924638.52121
[2025-10-12 23:11:46] 2025-10-13 03:11:02,437 | INFO     | mean x: 1760314923.860606
[2025-10-12 23:11:46] 2025-10-13 03:11:02,438 | INFO     | mean y: 2517436.206060606
[2025-10-12 23:11:46] 2025-10-13 03:11:02,438 | INFO     | -- intersect: 7991094881.343562
[2025-10-12 23:11:46] 2025-10-13 03:11:02,438 | INFO     | intersect: 7991094881.343562
[2025-10-12 23:11:46] 2025-10-13 03:11:02,443 | INFO     | chi2: 0.8649459225705372
[2025-10-12 23:11:46] 2025-10-13 03:11:02,443 | INFO     | current chi2=0.8649459225705372 (change=7.521424865812093 %)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,443 | INFO     | left removable region: 20
[2025-10-12 23:11:46] 2025-10-13 03:11:02,444 | INFO     | sum of square deviations: 9600112619.834444
[2025-10-12 23:11:46] 2025-10-13 03:11:02,452 | INFO     | sum of deviations: -15586922132.777094
[2025-10-12 23:11:46] 2025-10-13 03:11:02,452 | INFO     | mean x: 1760315045.8598726
[2025-10-12 23:11:46] 2025-10-13 03:11:02,453 | INFO     | mean y: 2520272.073248408
[2025-10-12 23:11:46] 2025-10-13 03:11:02,453 | INFO     | -- intersect: 2860600654.6184845
[2025-10-12 23:11:46] 2025-10-13 03:11:02,453 | INFO     | intersect: 2860600654.6184845
[2025-10-12 23:11:46] 2025-10-13 03:11:02,453 | INFO     | chi2: 0.03810245234790599
[2025-10-12 23:11:46] 2025-10-13 03:11:02,454 | INFO     | -- intersect: 2860600654.6184845
[2025-10-12 23:11:46] 2025-10-13 03:11:02,454 | INFO     | current memory leak: -1.62 B/s (using 314 data points, chi2=0.04)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,455 | INFO     | could have reported an average CPU frequency of 2518 MHz (15 samples)
[2025-10-12 23:11:46] 2025-10-13 03:11:02,455 | INFO     | ..............................
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . Timing measurements:
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . get job = 0 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . initial setup = 7 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . payload setup = 50 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . stage-in = 0 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . payload execution = 20756 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . stage-out = 6 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | . log creation = 0 s
[2025-10-12 23:11:46] 2025-10-13 03:11:02,460 | INFO     | ..............................
[2025-10-12 23:11:46] 2025-10-13 03:11:02,618 | INFO     | time since job start (20952s) is within the limit (172800.0s)
[2025-10-12 23:11:46] 2025-10-13 03:11:03,132 | INFO     | 
[2025-10-12 23:11:46] 2025-10-13 03:11:03,134 | INFO     | job summary report
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | --------------------------------------------------
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | PanDA job id: 6840711616
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | task id: 46676269
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | errors: (none)
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:11:46] 2025-10-13 03:11:03,135 | INFO     | pilot state: finished 
[2025-10-12 23:11:46] 2025-10-13 03:11:03,182 | INFO     | transexitcode: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | exeerrorcode: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | exeerrordiag: 
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | exitcode: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | exitmsg: OK
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | cpuconsumptiontime: 48207 s
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | nevents: 400
[2025-10-12 23:11:46] 2025-10-13 03:11:03,183 | INFO     | neventsw: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | pid: 4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | pgrp: 4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | corecount: 8
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | event service: False
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | sizes: {0: 2347972, 1: 2348657, 2: 2348685, 3: 2348884, 14: 2348884, 26: 2348912, 37: 2349068, 39: 2349358, 49: 2349386, 20811: 2382862, 20812: 2382861, 20821: 239
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | --------------------------------------------------
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | 
[2025-10-12 23:11:46] 2025-10-13 03:11:03,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 23:11:46] 2025-10-13 03:11:03,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | job 6840711616 has completed (purged errors)
[2025-10-12 23:11:46] 2025-10-13 03:11:03,563 | INFO     | overall cleanup function is called
[2025-10-12 23:11:46] 2025-10-13 03:11:04,723 | INFO     | --- collectZombieJob: --- 10, [4172563]
[2025-10-12 23:11:46] 2025-10-13 03:11:04,723 | INFO     | zombie collector waiting for pid 4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:04,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:11:46] 2025-10-13 03:11:04,723 | INFO     | collected zombie processes
[2025-10-12 23:11:46] 2025-10-13 03:11:04,723 | INFO     | will attempt to kill all subprocesses of pid=4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:09,559 | INFO     | PID=4165612 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:11:46] 2025-10-13 03:11:09,559 | INFO     | .. there are 16 such processes running
[2025-10-12 23:11:46] 2025-10-13 03:11:09,794 | INFO     | process IDs to be killed: [4172563] (in reverse order)
[2025-10-12 23:11:46] 2025-10-13 03:11:10,382 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:11:46] 2025-10-13 03:11:10,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:11:46] 2025-10-13 03:11:10,486 | INFO     | did not find any defunct processes belonging to 4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:10,565 | INFO     | did not find any defunct processes belonging to 4172563
[2025-10-12 23:11:46] 2025-10-13 03:11:10,565 | INFO     | ready for new job
[2025-10-12 23:11:46] 2025-10-13 03:11:10,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:11:46] 2025-10-13 03:11:10,591 | INFO     | ***************************************
[2025-10-12 23:11:46] 2025-10-13 03:11:10,592 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:11:46] 2025-10-13 03:11:10,592 | INFO     | ***************************************
[2025-10-12 23:11:46] 2025-10-13 03:11:10,592 | INFO     | 
[2025-10-12 23:11:46] 2025-10-13 03:11:10,622 | INFO     | architecture information:
[2025-10-12 23:11:46] 2025-10-13 03:11:10,623 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:11:46] 2025-10-13 03:11:10,694 | INFO     | cat /etc/os-release:
[2025-10-12 23:11:46] NAME="CentOS Linux"
[2025-10-12 23:11:46] VERSION="7 (Core)"
[2025-10-12 23:11:46] ID="centos"
[2025-10-12 23:11:46] ID_LIKE="rhel fedora"
[2025-10-12 23:11:46] VERSION_ID="7"
[2025-10-12 23:11:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:11:46] ANSI_COLOR="0;31"
[2025-10-12 23:11:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:11:46] HOME_URL="https://www.centos.org/"
[2025-10-12 23:11:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:11:46] 
[2025-10-12 23:11:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:11:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:11:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:11:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:11:46] 
[2025-10-12 23:11:46] 2025-10-13 03:11:10,695 | INFO     | ***************************************
[2025-10-12 23:11:46] 2025-10-13 03:11:11,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 23:11:46] 2025-10-13 03:11:11,297 | INFO     | sufficient remaining disk space (127441829888 B)
[2025-10-12 23:11:46] 2025-10-13 03:11:11,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:11:46] 2025-10-13 03:11:11,298 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:11:46] 2025-10-13 03:11:11,298 | INFO     | update_server=False
[2025-10-12 23:11:46] 2025-10-13 03:11:11,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:11:46] 2025-10-13 03:11:11,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:11:46] 2025-10-13 03:11:11,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:11:46] 2025-10-13 03:11:11,484 | INFO     | aborting loop
[2025-10-12 23:11:46] 2025-10-13 03:11:11,633 | INFO     | all data control threads have been joined
[2025-10-12 23:11:46] 2025-10-13 03:11:11,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:11:46] 2025-10-13 03:11:12,070 | INFO     | all payload control threads have been joined
[2025-10-12 23:11:46] 2025-10-13 03:11:12,317 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,329 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,381 | INFO     | [job] validate thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,490 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,639 | INFO     | [data] control thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,862 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:12,863 | INFO     | all job control threads have been joined
[2025-10-12 23:11:46] 2025-10-13 03:11:12,951 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,026 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,026 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,097 | INFO     | [payload] control thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,235 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,307 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,588 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:13,869 | INFO     | [job] control thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:14,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:11:46] 2025-10-13 03:11:18,544 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:11:46] 2025-10-13 03:11:26,995 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:11:46] 2025-10-13 03:11:27,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473357346624)>', '<ExcThread(monitor, started 140472827746048)>']
[2025-10-12 23:11:46] 2025-10-13 03:11:32,690 | INFO     | all workflow threads have been joined
[2025-10-12 23:11:46] 2025-10-13 03:11:32,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:11:46] 2025-10-13 03:11:32,690 | INFO     | traces error code: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:32,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:11:46] 2025-10-13 03:11:40,684 | INFO     | 20968s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 23:11:46] 2025-10-13 03:11:44,483 | INFO     | PID=4165612 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:11:46] 2025-10-13 03:11:44,484 | INFO     | .. there are 16 such processes running
[2025-10-12 23:11:46] 2025-10-13 03:11:44,487 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:11:46] 2025-10-13 03:11:44,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:11:46] 2025-10-13 03:11:44,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:11:46] 2025-10-13 03:11:44,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:11:46] 2025-10-13 03:11:44,488 | INFO     | [monitor] control thread has ended
[2025-10-12 23:11:46] 2025-10-13 03:11:45,243 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:11:46] 2025-10-13 03:11:45,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:11:46] 2025-10-13 03:11:45,254 [wrapper] pilotpid: 4165612
[2025-10-12 23:11:46] 2025-10-13 03:11:45,258 [wrapper] Pilot exit status: 0
[2025-10-12 23:11:46] 2025-10-13 03:11:45,354 [wrapper] pandaids: 6840711616
[2025-10-12 23:11:46] 2025-10-13 03:11:45,984 [wrapper] cleanup supervisor_pilot  753452 4165613
[2025-10-12 23:11:46] 2025-10-13 03:11:46,008 [wrapper] Test setup, not cleaning
[2025-10-12 23:11:46] 2025-10-13 03:11:46,040 [wrapper] apfmon messages muted
[2025-10-12 23:11:46] 2025-10-13 03:11:46,087 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:11:46] 2025-10-13 03:11:46,130 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:11:46]  *** Error codes and diagnostics ***
[2025-10-12 23:11:46]     "exeErrorCode": 0,
[2025-10-12 23:11:46]     "exeErrorDiag": "",
[2025-10-12 23:11:46]     "pilotErrorCode": 0,
[2025-10-12 23:11:46]     "pilotErrorDiag": "",
[2025-10-12 23:11:46]  *** Listing of results directory ***
[2025-10-12 23:11:46] total 409172
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:14 queuedata.json
[2025-10-12 23:11:46] -rwx------. 1 boincer umatlas     36292 Oct 12 15:15 runpilot2-wrapper.sh
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:11:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:20 run_atlas
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:20 job.xml
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas 219218497 Oct 12 17:20 EVNT.46676267._002180.pool.root.1
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:20 start_atlas.sh
[2025-10-12 23:11:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:20 shared
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 17:20 input.tar.gz
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:20 boinc_lockfile
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas      2546 Oct 12 17:20 pandaJob.out
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas    975528 Oct 12 17:21 agis_schedconf.cvmfs.json
[2025-10-12 23:11:46] drwx------. 5 boincer umatlas      4096 Oct 12 17:21 pilot3
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas 189621624 Oct 12 23:08 HITS.46676269._087184.pool.root.1
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:08 boinc_task_state.xml
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas      6859 Oct 12 23:09 init_data.xml
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas      1046 Oct 12 23:10 memory_monitor_summary.json
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas    524461 Oct 12 23:10 log.46676269._087184.job.log.tgz.1
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas        95 Oct 12 23:10 pilot_heartbeat.json
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas      7831 Oct 12 23:11 heartbeat.json
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas       939 Oct 12 23:11 pilotlog.txt
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:11 boinc_mmap_file
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:11 wrapper_checkpoint.txt
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas   2597180 Oct 12 23:11 log.46676269._087184.job.log.1
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas       357 Oct 12 23:11 output.list
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:11 runtime_log
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas   3143680 Oct 12 23:11 result.tar.gz
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 23:11 runtime_log.err
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas       657 Oct 12 23:11 3w2MDmFiGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmylUMDmXXhKQn.diag
[2025-10-12 23:11:46] -rw-r--r--. 1 boincer umatlas     21358 Oct 12 23:11 stderr.txt
[2025-10-12 23:11:46] HITS file was successfully produced:
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas 189621624 Oct 12 23:08 shared/HITS.pool.root.1
[2025-10-12 23:11:46]  *** Contents of shared directory: ***
[2025-10-12 23:11:46] total 402916
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas 219218497 Oct 12 17:20 ATLAS.root_0
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:20 start_atlas.sh
[2025-10-12 23:11:46] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 17:20 input.tar.gz
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas 189621624 Oct 12 23:08 HITS.pool.root.1
[2025-10-12 23:11:46] -rw-------. 1 boincer umatlas   3143680 Oct 12 23:11 result.tar.gz
23:11:48 (4159303): run_atlas exited; CPU time 49139.649011
23:11:48 (4159303): called boinc_finish(0)

</stderr_txt>
]]>

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