Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:38:16 (20136): wrapper (7.7.26015): starting
16:38:16 (20136): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:38:16] Arguments: --nthreads 12
[2025-10-12 16:38:16] Threads: 12
[2025-10-12 16:38:16] Checking for CVMFS
[2025-10-12 16:38:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:38:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:38:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:38:16] 2.11.2.0 30551 53313 87680 151636 1 59 14601732 20275200 1 130560 0 30963330 99.958 2412147 39840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:38:16] CVMFS is ok
[2025-10-12 16:38:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:38:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:38:16] Further information can be found at the LHC@home message board.
[2025-10-12 16:38:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:38:16] Checking for apptainer binary...
[2025-10-12 16:38:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:38:16] Running /usr/bin/apptainer --version
[2025-10-12 16:38:16] apptainer version 1.3.2-1.el7
[2025-10-12 16:38:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:38:18] c-205-16.aglt2.org
[2025-10-12 16:38:18] apptainer works
[2025-10-12 16:38:18] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:38:18] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:38:18] Starting ATLAS job with PandaID=6840711539
[2025-10-12 16:38:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:53:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:53:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/b2/log.46676269._087107.job.log.tgz.1
[2025-10-12 17:53:45]  workdir=None
[2025-10-12 17:53:45] ]
[2025-10-12 17:53:45] 2025-10-12 21:53:14,430 | INFO     | transferring file log.46676269._087107.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840711539/log.46676269._087107.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 17:53:45] 2025-10-12 21:53:14,430 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840711539/log.46676269._087107.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._087107.job
[2025-10-12 17:53:45] 2025-10-12 21:53:14,452 | INFO     | adding to output.list: log.46676269._087107.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/b2/log.46676269._087107.job.log.tg
[2025-10-12 17:53:45] 2025-10-12 21:53:14,453 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:53:45] 2025-10-12 21:53:14,454 | INFO     | summary of transferred files:
[2025-10-12 17:53:45] 2025-10-12 21:53:14,454 | INFO     |  -- lfn=log.46676269._087107.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:53:45] 2025-10-12 21:53:14,454 | INFO     | stage-out finished correctly
[2025-10-12 17:53:45] 2025-10-12 21:53:14,539 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:53:45] 2025-10-12 21:53:14,559 | INFO     | time since job start (4481s) is within the limit (172800.0s)
[2025-10-12 17:53:45] 2025-10-12 21:53:15,389 | WARNING  | process 30168 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 17:53:45] 2025-10-12 21:53:15,389 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840711539/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:53:45] 2025-10-12 21:53:15,475 | INFO     | number of running child processes to parent process 30168: 1
[2025-10-12 17:53:45] 2025-10-12 21:53:15,476 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:53:45] 2025-10-12 21:53:15,676 | INFO     | PID=23810 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:53:45] 2025-10-12 21:53:15,908 | INFO     | job 6840711539 has state=finished
[2025-10-12 17:53:45] 2025-10-12 21:53:15,908 | INFO     | preparing for final server update for job 6840711539 in state='finished'
[2025-10-12 17:53:45] 2025-10-12 21:53:15,909 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:53:45] 2025-10-12 21:53:15,909 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:53:45] 2025-10-12 21:53:15,909 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:53:45] 2025-10-12 21:53:15,909 | INFO     | job 6840711539 has finished - writing final server update
[2025-10-12 17:53:45] 2025-10-12 21:53:15,910 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:53:45] 2025-10-12 21:53:15,911 | INFO     | executing command: lscpu
[2025-10-12 17:53:45] 2025-10-12 21:53:15,938 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:53:45] 2025-10-12 21:53:16,677 | INFO     | time since job start (4483s) is within the limit (172800.0s)
[2025-10-12 17:53:45] 2025-10-12 21:53:17,979 | INFO     | monitor loop #334: job 0:6840711539 is in state 'finished'
[2025-10-12 17:53:45] 2025-10-12 21:53:17,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:53:45] 2025-10-12 21:53:18,683 | INFO     | time since job start (4485s) is within the limit (172800.0s)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,480 | INFO     | monitor loop #335: job 0:6840711539 is in state 'finished'
[2025-10-12 17:53:45] 2025-10-12 21:53:20,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,688 | INFO     | time since job start (4487s) is within the limit (172800.0s)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,745 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:53:45] 2025-10-12 21:53:20,749 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-12 17:53:45] 2025-10-12 21:53:20,752 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840711539/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,753 | INFO     | extracted standard info from prmon json
[2025-10-12 17:53:45] 2025-10-12 21:53:20,753 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:53:45] 2025-10-12 21:53:20,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:53:45] 2025-10-12 21:53:20,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:53:45] 2025-10-12 21:53:20,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:53:45] 2025-10-12 21:53:20,755 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:53:45] 2025-10-12 21:53:20,755 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 17:53:45] 2025-10-12 21:53:20,755 | INFO     | sum of deviations: -8485091947.999996
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | mean x: 1760303829.5
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | mean y: 2813990.696969697
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | -- intersect: 167587244462.44305
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | intersect: 167587244462.44305
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | chi2: 0.053856491442505296
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | -- intersect: 167587244462.44305
[2025-10-12 17:53:45] 2025-10-12 21:53:20,756 | INFO     | current memory leak: -95.20 B/s (using 66 data points, chi2=0.05)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | ..............................
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | . Timing measurements:
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | . get job = 0 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | . initial setup = 2 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | . payload setup = 7 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,757 | INFO     | . stage-in = 0 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,758 | INFO     | . payload execution = 4453 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,758 | INFO     | . stage-out = 0 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,758 | INFO     | . log creation = 0 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,758 | INFO     | ..............................
[2025-10-12 17:53:45] 2025-10-12 21:53:20,842 | INFO     | 
[2025-10-12 17:53:45] 2025-10-12 21:53:20,842 | INFO     | job summary report
[2025-10-12 17:53:45] 2025-10-12 21:53:20,842 | INFO     | --------------------------------------------------
[2025-10-12 17:53:45] 2025-10-12 21:53:20,842 | INFO     | PanDA job id: 6840711539
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | task id: 46676269
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | errors: (none)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | pilot state: finished 
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | transexitcode: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:20,843 | INFO     | exeerrorcode: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | exeerrordiag: 
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | exitcode: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | exitmsg: OK
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | cpuconsumptiontime: 46871 s
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | nevents: 400
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | neventsw: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | pid: 30168
[2025-10-12 17:53:45] 2025-10-12 21:53:20,844 | INFO     | pgrp: 30168
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | corecount: 12
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | event service: False
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | sizes: {0: 2348807, 5: 2349069, 11: 2349125, 4464: 2375230, 4465: 2384284, 4471: 2384422}
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | --------------------------------------------------
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | 
[2025-10-12 17:53:45] 2025-10-12 21:53:20,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:53:45] 2025-10-12 21:53:20,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:53:45] 2025-10-12 21:53:20,874 | INFO     | job 6840711539 has completed (purged errors)
[2025-10-12 17:53:45] 2025-10-12 21:53:20,874 | INFO     | overall cleanup function is called
[2025-10-12 17:53:45] 2025-10-12 21:53:21,882 | INFO     | --- collectZombieJob: --- 10, [30168]
[2025-10-12 17:53:45] 2025-10-12 21:53:21,882 | INFO     | zombie collector waiting for pid 30168
[2025-10-12 17:53:45] 2025-10-12 21:53:21,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:53:45] 2025-10-12 21:53:21,882 | INFO     | collected zombie processes
[2025-10-12 17:53:45] 2025-10-12 21:53:21,882 | INFO     | will attempt to kill all subprocesses of pid=30168
[2025-10-12 17:53:45] 2025-10-12 21:53:21,975 | INFO     | process IDs to be killed: [30168] (in reverse order)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,026 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:53:45] 2025-10-12 21:53:22,030 | INFO     | did not find any defunct processes belonging to 30168
[2025-10-12 17:53:45] 2025-10-12 21:53:22,033 | INFO     | did not find any defunct processes belonging to 30168
[2025-10-12 17:53:45] 2025-10-12 21:53:22,033 | INFO     | ready for new job
[2025-10-12 17:53:45] 2025-10-12 21:53:22,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:53:45] 2025-10-12 21:53:22,035 | INFO     | ***************************************
[2025-10-12 17:53:45] 2025-10-12 21:53:22,035 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:53:45] 2025-10-12 21:53:22,035 | INFO     | ***************************************
[2025-10-12 17:53:45] 2025-10-12 21:53:22,035 | INFO     | 
[2025-10-12 17:53:45] 2025-10-12 21:53:22,036 | INFO     | architecture information:
[2025-10-12 17:53:45] 2025-10-12 21:53:22,036 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:53:45] 2025-10-12 21:53:22,051 | INFO     | cat /etc/os-release:
[2025-10-12 17:53:45] NAME="CentOS Linux"
[2025-10-12 17:53:45] VERSION="7 (Core)"
[2025-10-12 17:53:45] ID="centos"
[2025-10-12 17:53:45] ID_LIKE="rhel fedora"
[2025-10-12 17:53:45] VERSION_ID="7"
[2025-10-12 17:53:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:53:45] ANSI_COLOR="0;31"
[2025-10-12 17:53:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:53:45] HOME_URL="https://www.centos.org/"
[2025-10-12 17:53:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:53:45] 
[2025-10-12 17:53:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:53:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:53:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:53:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:53:45] 
[2025-10-12 17:53:45] 2025-10-12 21:53:22,052 | INFO     | ***************************************
[2025-10-12 17:53:45] 2025-10-12 21:53:22,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:53:45] 2025-10-12 21:53:22,572 | INFO     | sufficient remaining disk space (29496442880 B)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:53:45] 2025-10-12 21:53:22,572 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:53:45] 2025-10-12 21:53:22,572 | INFO     | update_server=False
[2025-10-12 17:53:45] 2025-10-12 21:53:22,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:53:45] 2025-10-12 21:53:22,573 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:53:45] 2025-10-12 21:53:22,574 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:53:45] 2025-10-12 21:53:22,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:53:45] 2025-10-12 21:53:22,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:53:45] 2025-10-12 21:53:22,720 | INFO     | all job control threads have been joined
[2025-10-12 17:53:45] 2025-10-12 21:53:22,866 | INFO     | all data control threads have been joined
[2025-10-12 17:53:45] 2025-10-12 21:53:22,982 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:53:45] 2025-10-12 21:53:22,982 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:53:45] 2025-10-12 21:53:22,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:53:45] 2025-10-12 21:53:22,982 | INFO     | will abort loop
[2025-10-12 17:53:45] 2025-10-12 21:53:23,318 | INFO     | all payload control threads have been joined
[2025-10-12 17:53:45] 2025-10-12 21:53:23,577 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,579 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,629 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,696 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,725 | INFO     | [job] control thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,871 | INFO     | [data] control thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:23,988 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,316 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,323 | INFO     | [payload] control thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,344 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,351 | INFO     | [job] validate thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,428 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,578 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:24,643 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:25,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:53:45] 2025-10-12 21:53:29,135 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:30,801 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 17:53:45] 2025-10-12 21:53:33,508 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:53:45] 2025-10-12 21:53:34,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:53:45] 2025-10-12 21:53:40,158 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:53:45] 2025-10-12 21:53:40,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749043857216)>', '<ExcThread(monitor, started 139748035262208)>']
[2025-10-12 17:53:45] 2025-10-12 21:53:40,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:53:45] 2025-10-12 21:53:40,662 | INFO     | [monitor] control thread has ended
[2025-10-12 17:53:45] 2025-10-12 21:53:45,210 | INFO     | all workflow threads have been joined
[2025-10-12 17:53:45] 2025-10-12 21:53:45,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:53:45] 2025-10-12 21:53:45,224 | INFO     | traces error code: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:45,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:53:45] 2025-10-12 21:53:45,332 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:53:45] 2025-10-12 21:53:45,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:53:45] 2025-10-12 21:53:45,339 [wrapper] pilotpid: 23810
[2025-10-12 17:53:45] 2025-10-12 21:53:45,343 [wrapper] Pilot exit status: 0
[2025-10-12 17:53:45] 2025-10-12 21:53:45,358 [wrapper] pandaids: 6840711539
[2025-10-12 17:53:45] 2025-10-12 21:53:45,399 [wrapper] cleanup supervisor_pilot 19442 23811
[2025-10-12 17:53:45] 2025-10-12 21:53:45,403 [wrapper] Test setup, not cleaning
[2025-10-12 17:53:45] 2025-10-12 21:53:45,407 [wrapper] apfmon messages muted
[2025-10-12 17:53:45] 2025-10-12 21:53:45,411 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:53:45] 2025-10-12 21:53:45,415 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:53:45]  *** Error codes and diagnostics ***
[2025-10-12 17:53:45]     "exeErrorCode": 0,
[2025-10-12 17:53:45]     "exeErrorDiag": "",
[2025-10-12 17:53:45]     "pilotErrorCode": 0,
[2025-10-12 17:53:45]     "pilotErrorDiag": "",
[2025-10-12 17:53:45]  *** Listing of results directory ***
[2025-10-12 17:53:45] total 414404
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:09 queuedata.json
[2025-10-12 17:53:45] -rwx------ 1 boincer umatlas     36292 Oct 12 15:09 runpilot2-wrapper.sh
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:53:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:38 run_atlas
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:38 job.xml
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas 222613725 Oct 12 16:38 EVNT.46676267._001869.pool.root.1
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:38 start_atlas.sh
[2025-10-12 17:53:45] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:38 shared
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas    569689 Oct 12 16:38 input.tar.gz
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:38 boinc_lockfile
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:38 pandaJob.out
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas    975536 Oct 12 16:38 agis_schedconf.cvmfs.json
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas   1560580 Oct 12 16:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:53:45] drwx------ 5 boincer umatlas      4096 Oct 12 16:38 pilot3
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 17:45 init_data.xml
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas        95 Oct 12 17:52 pilot_heartbeat.json
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas 195785865 Oct 12 17:52 HITS.46676269._087107.pool.root.1
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas      1049 Oct 12 17:53 memory_monitor_summary.json
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:53 boinc_mmap_file
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:53 wrapper_checkpoint.txt
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas    372242 Oct 12 17:53 log.46676269._087107.job.log.tgz.1
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:53 boinc_task_state.xml
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas      7858 Oct 12 17:53 heartbeat.json
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas      4810 Oct 12 17:53 pilotlog.txt
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas    651154 Oct 12 17:53 log.46676269._087107.job.log.1
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas       357 Oct 12 17:53 output.list
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:53 runtime_log
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas   1044480 Oct 12 17:53 result.tar.gz
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 17:53 runtime_log.err
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas       659 Oct 12 17:53 iA3LDmzcGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6kUMDmWwtoVo.diag
[2025-10-12 17:53:45] -rw-r--r-- 1 boincer umatlas     22241 Oct 12 17:53 stderr.txt
[2025-10-12 17:53:45] HITS file was successfully produced:
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas 195785865 Oct 12 17:52 shared/HITS.pool.root.1
[2025-10-12 17:53:45]  *** Contents of shared directory: ***
[2025-10-12 17:53:45] total 410200
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas 222613725 Oct 12 16:38 ATLAS.root_0
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:38 start_atlas.sh
[2025-10-12 17:53:45] -rw-r--r-- 2 boincer umatlas    569689 Oct 12 16:38 input.tar.gz
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas 195785865 Oct 12 17:52 HITS.pool.root.1
[2025-10-12 17:53:45] -rw------- 1 boincer umatlas   1044480 Oct 12 17:53 result.tar.gz
17:53:46 (20136): run_atlas exited; CPU time 46844.338800
17:53:46 (20136): called boinc_finish(0)

</stderr_txt>
]]>

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