Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:04 (3855654): wrapper (7.7.26015): starting
17:04:04 (3855654): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:04:04] Arguments: --nthreads 8
[2025-10-12 17:04:04] Threads: 8
[2025-10-12 17:04:04] Checking for CVMFS
[2025-10-12 17:04:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:04:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:04:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:04:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:04:04] 2.13.2.0 3290912 5918 155236 151636 2 505 36822743 40960001 14499 16776704 0 12590718 99.765 6747002 31896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:04:04] CVMFS is ok
[2025-10-12 17:04:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:04:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:04:04] Further information can be found at the LHC@home message board.
[2025-10-12 17:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:04:04] Checking for apptainer binary...
[2025-10-12 17:04:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:04:04] Running /usr/bin/apptainer --version
[2025-10-12 17:04:04] apptainer version 1.4.3-1.el9
[2025-10-12 17:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:04:05] c-210-31-3.aglt2.org
[2025-10-12 17:04:05] apptainer works
[2025-10-12 17:04:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:04:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:04:05] Starting ATLAS job with PandaID=6840711496
[2025-10-12 17:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:32:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:32:12] 2025-10-13 02:31:36,974 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:32:12] 2025-10-13 02:31:36,975 | INFO     | sum of square deviations: 10255957034.024923
[2025-10-12 22:32:12] 2025-10-13 02:31:36,983 | INFO     | sum of deviations: 17580258843.327095
[2025-10-12 22:32:12] 2025-10-13 02:31:36,984 | INFO     | mean x: 1760312859.1931465
[2025-10-12 22:32:12] 2025-10-13 02:31:36,984 | INFO     | mean y: 2493911.785046729
[2025-10-12 22:32:12] 2025-10-13 02:31:36,984 | INFO     | -- intersect: -3014948108.22191
[2025-10-12 22:32:12] 2025-10-13 02:31:36,984 | INFO     | intersect: -3014948108.22191
[2025-10-12 22:32:12] 2025-10-13 02:31:36,989 | INFO     | chi2: 2.850625152900525
[2025-10-12 22:32:12] 2025-10-13 02:31:36,990 | INFO     | sum of square deviations: 9784134538.83546
[2025-10-12 22:32:12] 2025-10-13 02:31:36,997 | INFO     | sum of deviations: 57580065748.53164
[2025-10-12 22:32:12] 2025-10-13 02:31:36,998 | INFO     | mean x: 1760312706.6962025
[2025-10-12 22:32:12] 2025-10-13 02:31:36,998 | INFO     | mean y: 2506716.4430379746
[2025-10-12 22:32:12] 2025-10-13 02:31:36,998 | INFO     | -- intersect: -10357011643.328732
[2025-10-12 22:32:12] 2025-10-13 02:31:36,998 | INFO     | intersect: -10357011643.328732
[2025-10-12 22:32:12] 2025-10-13 02:31:36,999 | INFO     | chi2: 1.4574430701221999
[2025-10-12 22:32:12] 2025-10-13 02:31:36,999 | INFO     | current chi2=1.4574430701221999 (change=48.872861497091456 %)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,000 | INFO     | sum of square deviations: 9326990595.035378
[2025-10-12 22:32:12] 2025-10-13 02:31:37,007 | INFO     | sum of deviations: 56557763365.65913
[2025-10-12 22:32:12] 2025-10-13 02:31:37,007 | INFO     | mean x: 1760312554.1961415
[2025-10-12 22:32:12] 2025-10-13 02:31:37,007 | INFO     | mean y: 2506375.382636656
[2025-10-12 22:32:12] 2025-10-13 02:31:37,008 | INFO     | -- intersect: -10671819911.900034
[2025-10-12 22:32:12] 2025-10-13 02:31:37,008 | INFO     | intersect: -10671819911.900034
[2025-10-12 22:32:12] 2025-10-13 02:31:37,008 | INFO     | chi2: 1.4576901252899506
[2025-10-12 22:32:12] 2025-10-13 02:31:37,009 | INFO     | current chi2=1.4576901252899506 (change=-0.01695127396845654 %)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,013 | INFO     | right removable region: 310
[2025-10-12 22:32:12] 2025-10-13 02:31:37,014 | INFO     | sum of square deviations: 9784096718.835463
[2025-10-12 22:32:12] 2025-10-13 02:31:37,017 | INFO     | sum of deviations: -31636900776.987347
[2025-10-12 22:32:12] 2025-10-13 02:31:37,021 | INFO     | mean x: 1760313011.6962025
[2025-10-12 22:32:12] 2025-10-13 02:31:37,021 | INFO     | mean y: 2509705.1772151897
[2025-10-12 22:32:12] 2025-10-13 02:31:37,021 | INFO     | -- intersect: 5694486153.065503
[2025-10-12 22:32:12] 2025-10-13 02:31:37,022 | INFO     | intersect: 5694486153.065503
[2025-10-12 22:32:12] 2025-10-13 02:31:37,022 | INFO     | chi2: 1.4329445235938318
[2025-10-12 22:32:12] 2025-10-13 02:31:37,022 | INFO     | current chi2=1.4329445235938318 (change=49.732271107767225 %)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,023 | INFO     | sum of square deviations: 9326953751.035378
[2025-10-12 22:32:12] 2025-10-13 02:31:37,030 | INFO     | sum of deviations: -27707615769.733116
[2025-10-12 22:32:12] 2025-10-13 02:31:37,030 | INFO     | mean x: 1760313164.1961415
[2025-10-12 22:32:12] 2025-10-13 02:31:37,031 | INFO     | mean y: 2508381.389067524
[2025-10-12 22:32:12] 2025-10-13 02:31:37,031 | INFO     | -- intersect: 5231877164.582127
[2025-10-12 22:32:12] 2025-10-13 02:31:37,031 | INFO     | intersect: 5231877164.582127
[2025-10-12 22:32:12] 2025-10-13 02:31:37,032 | INFO     | chi2: 1.4184523780295608
[2025-10-12 22:32:12] 2025-10-13 02:31:37,032 | INFO     | current chi2=1.4184523780295608 (change=1.0113542656853638 %)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,032 | INFO     | left removable region: 20
[2025-10-12 22:32:12] 2025-10-13 02:31:37,032 | INFO     | sum of square deviations: 7562244701.296531
[2025-10-12 22:32:12] 2025-10-13 02:31:37,039 | INFO     | sum of deviations: 7754432016.351727
[2025-10-12 22:32:12] 2025-10-13 02:31:37,040 | INFO     | mean x: 1760313133.6965518
[2025-10-12 22:32:12] 2025-10-13 02:31:37,040 | INFO     | mean y: 2523090.151724138
[2025-10-12 22:32:12] 2025-10-13 02:31:37,040 | INFO     | -- intersect: -1802526741.2033331
[2025-10-12 22:32:12] 2025-10-13 02:31:37,040 | INFO     | intersect: -1802526741.2033331
[2025-10-12 22:32:12] 2025-10-13 02:31:37,045 | INFO     | chi2: 0.0009799328186423093
[2025-10-12 22:32:12] 2025-10-13 02:31:37,045 | INFO     | -- intersect: -1802526741.2033331
[2025-10-12 22:32:12] 2025-10-13 02:31:37,045 | INFO     | current memory leak: 1.03 B/s (using 290 data points, chi2=0.00)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,046 | INFO     | could have reported an average CPU frequency of 2653 MHz (14 samples)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | ..............................
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . Timing measurements:
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . get job = 0 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . initial setup = 3 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . payload setup = 11 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . stage-in = 0 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . payload execution = 19564 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . stage-out = 3 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | . log creation = 0 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,047 | INFO     | ..............................
[2025-10-12 22:32:12] 2025-10-13 02:31:37,423 | INFO     | 
[2025-10-12 22:32:12] 2025-10-13 02:31:37,423 | INFO     | job summary report
[2025-10-12 22:32:12] 2025-10-13 02:31:37,423 | INFO     | --------------------------------------------------
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | PanDA job id: 6840711496
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | task id: 46676269
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | errors: (none)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | pilot state: finished 
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | transexitcode: 0
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | exeerrorcode: 0
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | exeerrordiag: 
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | exitcode: 0
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | exitmsg: OK
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | cpuconsumptiontime: 46027 s
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | nevents: 400
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | neventsw: 0
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | pid: 3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | pgrp: 3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:37,424 | INFO     | corecount: 8
[2025-10-12 22:32:12] 2025-10-13 02:31:37,425 | INFO     | event service: False
[2025-10-12 22:32:12] 2025-10-13 02:31:37,425 | INFO     | sizes: {0: 2348577, 1: 2348832, 8: 2349094, 12: 2349122, 19579: 2382574, 19580: 2382573, 19585: 2391755, 19587: 2391811, 19617: 2392005}
[2025-10-12 22:32:12] 2025-10-13 02:31:37,425 | INFO     | --------------------------------------------------
[2025-10-12 22:32:12] 2025-10-13 02:31:37,425 | INFO     | 
[2025-10-12 22:32:12] 2025-10-13 02:31:37,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:32:12] 2025-10-13 02:31:37,505 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,506 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:32:12] 2025-10-13 02:31:37,507 | INFO     | job 6840711496 has completed (purged errors)
[2025-10-12 22:32:12] 2025-10-13 02:31:37,507 | INFO     | overall cleanup function is called
[2025-10-12 22:32:12] 2025-10-13 02:31:37,639 | INFO     | PID=3859306 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:32:12] 2025-10-13 02:31:37,643 | INFO     | .. there are 16 such processes running
[2025-10-12 22:32:12] 2025-10-13 02:31:38,520 | INFO     | --- collectZombieJob: --- 10, [3865812]
[2025-10-12 22:32:12] 2025-10-13 02:31:38,521 | INFO     | zombie collector waiting for pid 3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:38,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:32:12] 2025-10-13 02:31:38,522 | INFO     | collected zombie processes
[2025-10-12 22:32:12] 2025-10-13 02:31:38,522 | INFO     | will attempt to kill all subprocesses of pid=3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:39,450 | INFO     | process IDs to be killed: [3865812] (in reverse order)
[2025-10-12 22:32:12] 2025-10-13 02:31:39,614 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:32:12] 2025-10-13 02:31:39,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:32:12] 2025-10-13 02:31:39,635 | INFO     | did not find any defunct processes belonging to 3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:39,647 | INFO     | did not find any defunct processes belonging to 3865812
[2025-10-12 22:32:12] 2025-10-13 02:31:39,648 | INFO     | ready for new job
[2025-10-12 22:32:12] 2025-10-13 02:31:39,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:32:12] 2025-10-13 02:31:39,652 | INFO     | ***************************************
[2025-10-12 22:32:12] 2025-10-13 02:31:39,652 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:32:12] 2025-10-13 02:31:39,652 | INFO     | ***************************************
[2025-10-12 22:32:12] 2025-10-13 02:31:39,652 | INFO     | 
[2025-10-12 22:32:12] 2025-10-13 02:31:39,656 | INFO     | architecture information:
[2025-10-12 22:32:12] 2025-10-13 02:31:39,657 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:32:12] 2025-10-13 02:31:39,681 | INFO     | cat /etc/os-release:
[2025-10-12 22:32:12] NAME="CentOS Linux"
[2025-10-12 22:32:12] VERSION="7 (Core)"
[2025-10-12 22:32:12] ID="centos"
[2025-10-12 22:32:12] ID_LIKE="rhel fedora"
[2025-10-12 22:32:12] VERSION_ID="7"
[2025-10-12 22:32:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:32:12] ANSI_COLOR="0;31"
[2025-10-12 22:32:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:32:12] HOME_URL="https://www.centos.org/"
[2025-10-12 22:32:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:32:12] 
[2025-10-12 22:32:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:32:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:32:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:32:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:32:12] 
[2025-10-12 22:32:12] 2025-10-13 02:31:39,699 | INFO     | ***************************************
[2025-10-12 22:32:12] 2025-10-13 02:31:40,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:32:12] 2025-10-13 02:31:40,286 | INFO     | sufficient remaining disk space (74055680000 B)
[2025-10-12 22:32:12] 2025-10-13 02:31:40,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:32:12] 2025-10-13 02:31:40,287 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:32:12] 2025-10-13 02:31:40,288 | INFO     | update_server=False
[2025-10-12 22:32:12] 2025-10-13 02:31:40,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:32:12] 2025-10-13 02:31:40,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:32:12] 2025-10-13 02:31:40,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:12] 2025-10-13 02:31:40,289 | INFO     | aborting loop
[2025-10-12 22:32:12] 2025-10-13 02:31:40,655 | INFO     | all payload control threads have been joined
[2025-10-12 22:32:12] 2025-10-13 02:31:40,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:32:12] 2025-10-13 02:31:40,877 | INFO     | all job control threads have been joined
[2025-10-12 22:32:12] 2025-10-13 02:31:41,294 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,295 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,309 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,312 | INFO     | all data control threads have been joined
[2025-10-12 22:32:12] 2025-10-13 02:31:41,473 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,495 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,598 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,660 | INFO     | [payload] control thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:41,883 | INFO     | [job] control thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,178 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,291 | INFO     | [job] validate thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,325 | INFO     | [data] control thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:32:12] 2025-10-13 02:31:42,628 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,792 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:42,809 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:43,444 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:44,298 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:32:12] 2025-10-13 02:31:55,600 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:32:12] 2025-10-13 02:31:55,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555533195072)>', '<ExcThread(monitor, started 140555178714880)>']
[2025-10-12 22:32:12] 2025-10-13 02:32:00,978 | INFO     | all workflow threads have been joined
[2025-10-12 22:32:12] 2025-10-13 02:32:00,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:32:12] 2025-10-13 02:32:00,978 | INFO     | traces error code: 0
[2025-10-12 22:32:12] 2025-10-13 02:32:00,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:32:12] 2025-10-13 02:32:11,119 | INFO     | PID=3859306 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:32:12] 2025-10-13 02:32:11,121 | INFO     | .. there are 16 such processes running
[2025-10-12 22:32:12] 2025-10-13 02:32:11,126 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:32:12] 2025-10-13 02:32:11,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:32:12] 2025-10-13 02:32:11,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:32:12] 2025-10-13 02:32:11,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:32:12] 2025-10-13 02:32:11,126 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:32:12] 2025-10-13 02:32:11,127 | INFO     | [monitor] control thread has ended
[2025-10-12 22:32:12] 2025-10-13 02:32:11,777 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:32:12] 2025-10-13 02:32:11,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:32:12] 2025-10-13 02:32:11,856 [wrapper] pilotpid: 3859306
[2025-10-12 22:32:12] 2025-10-13 02:32:11,902 [wrapper] Pilot exit status: 0
[2025-10-12 22:32:12] 2025-10-13 02:32:11,985 [wrapper] pandaids: 6840711496
[2025-10-12 22:32:12] 2025-10-13 02:32:12,122 [wrapper] cleanup supervisor_pilot  236237 3859307
[2025-10-12 22:32:12] 2025-10-13 02:32:12,127 [wrapper] Test setup, not cleaning
[2025-10-12 22:32:12] 2025-10-13 02:32:12,130 [wrapper] apfmon messages muted
[2025-10-12 22:32:12] 2025-10-13 02:32:12,142 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:32:12] 2025-10-13 02:32:12,158 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:32:12]  *** Error codes and diagnostics ***
[2025-10-12 22:32:12]     "exeErrorCode": 0,
[2025-10-12 22:32:12]     "exeErrorDiag": "",
[2025-10-12 22:32:12]     "pilotErrorCode": 0,
[2025-10-12 22:32:12]     "pilotErrorDiag": "",
[2025-10-12 22:32:12]  *** Listing of results directory ***
[2025-10-12 22:32:12] total 413664
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:07 queuedata.json
[2025-10-12 22:32:12] -rwx------. 1 boincer umatlas     36292 Oct 12 15:08 runpilot2-wrapper.sh
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:32:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:04 run_atlas
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:04 job.xml
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas 221641396 Oct 12 17:04 EVNT.46676267._000542.pool.root.1
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:04 start_atlas.sh
[2025-10-12 22:32:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:04 shared
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 17:04 input.tar.gz
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:04 boinc_lockfile
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 17:04 pandaJob.out
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas    975536 Oct 12 17:04 agis_schedconf.cvmfs.json
[2025-10-12 22:32:12] drwx------. 5 boincer umatlas      4096 Oct 12 17:04 pilot3
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas 191772787 Oct 12 22:28 HITS.46676269._087064.pool.root.1
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas       531 Oct 12 22:29 boinc_task_state.xml
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas      1045 Oct 12 22:30 memory_monitor_summary.json
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas    528557 Oct 12 22:31 log.46676269._087064.job.log.tgz.1
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 22:31 init_data.xml
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas        95 Oct 12 22:31 pilot_heartbeat.json
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas      7837 Oct 12 22:31 heartbeat.json
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas       893 Oct 12 22:32 pilotlog.txt
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:32 boinc_mmap_file
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas        28 Oct 12 22:32 wrapper_checkpoint.txt
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas   2610269 Oct 12 22:32 log.46676269._087064.job.log.1
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas       357 Oct 12 22:32 output.list
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:32 runtime_log
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas   3153920 Oct 12 22:32 result.tar.gz
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 22:32 runtime_log.err
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas       657 Oct 12 22:32 Er5MDmMcGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZElNDmwobwEm.diag
[2025-10-12 22:32:12] -rw-r--r--. 1 boincer umatlas     21121 Oct 12 22:32 stderr.txt
[2025-10-12 22:32:12] HITS file was successfully produced:
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas 191772787 Oct 12 22:28 shared/HITS.pool.root.1
[2025-10-12 22:32:12]  *** Contents of shared directory: ***
[2025-10-12 22:32:12] total 407392
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas 221641396 Oct 12 17:04 ATLAS.root_0
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:04 start_atlas.sh
[2025-10-12 22:32:12] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 17:04 input.tar.gz
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas 191772787 Oct 12 22:28 HITS.pool.root.1
[2025-10-12 22:32:12] -rw-------. 1 boincer umatlas   3153920 Oct 12 22:32 result.tar.gz
22:32:13 (3855654): run_atlas exited; CPU time 46587.541662
22:32:13 (3855654): called boinc_finish(0)

</stderr_txt>
]]>

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