Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:16 (7423): wrapper (7.7.26015): starting
16:33:16 (7423): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:33:16] Arguments: --nthreads 12
[2025-10-12 16:33:16] Threads: 12
[2025-10-12 16:33:16] Checking for CVMFS
[2025-10-12 16:33:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:33:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:33:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:33:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:33:16] 2.11.2.0 2933 223367 99904 151636 2 59 15618096 20275200 1 130560 2 107826386 99.983 13102816 12471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:33:16] CVMFS is ok
[2025-10-12 16:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:33:16] Further information can be found at the LHC@home message board.
[2025-10-12 16:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:33:16] Checking for apptainer binary...
[2025-10-12 16:33:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:33:16] Running /usr/bin/apptainer --version
[2025-10-12 16:33:16] apptainer version 1.3.2-1.el7
[2025-10-12 16:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:33:18] c-205-15.aglt2.org
[2025-10-12 16:33:18] apptainer works
[2025-10-12 16:33:18] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:33:18] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:33:18] Starting ATLAS job with PandaID=6840428738
[2025-10-12 16:33:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:45:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:45:45]  mtime=0
[2025-10-12 17:45:45]  protocol_id=None
[2025-10-12 17:45:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 17:45:45]  replicas=None
[2025-10-12 17:45:45]  scope=mc23_13p6TeV
[2025-10-12 17:45:45]  status=None
[2025-10-12 17:45:45]  status_code=0
[2025-10-12 17:45:45]  storage_token=
[2025-10-12 17:45:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840428738/log.46676269._084322.job.log.tgz.1
[2025-10-12 17:45:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/41/log.46676269._084322.job.log.tgz.1
[2025-10-12 17:45:45]  workdir=None
[2025-10-12 17:45:45] ]
[2025-10-12 17:45:45] 2025-10-12 21:44:51,252 | INFO     | transferring file log.46676269._084322.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840428738/log.46676269._084322.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 17:45:45] 2025-10-12 21:44:51,253 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840428738/log.46676269._084322.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._084322.job
[2025-10-12 17:45:45] 2025-10-12 21:44:51,275 | INFO     | adding to output.list: log.46676269._084322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/41/log.46676269._084322.job.log.tg
[2025-10-12 17:45:45] 2025-10-12 21:44:51,276 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:45:45] 2025-10-12 21:44:51,276 | INFO     | summary of transferred files:
[2025-10-12 17:45:45] 2025-10-12 21:44:51,276 | INFO     |  -- lfn=log.46676269._084322.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:45:45] 2025-10-12 21:44:51,276 | INFO     | stage-out finished correctly
[2025-10-12 17:45:45] 2025-10-12 21:44:51,359 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:45:45] 2025-10-12 21:44:51,441 | INFO     | job 6840428738 has state=finished
[2025-10-12 17:45:45] 2025-10-12 21:44:51,441 | INFO     | preparing for final server update for job 6840428738 in state='finished'
[2025-10-12 17:45:45] 2025-10-12 21:44:51,441 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:45:45] 2025-10-12 21:44:51,442 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:45:45] 2025-10-12 21:44:51,442 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:45:45] 2025-10-12 21:44:51,442 | INFO     | job 6840428738 has finished - writing final server update
[2025-10-12 17:45:45] 2025-10-12 21:44:51,442 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:45:45] 2025-10-12 21:44:51,443 | INFO     | executing command: lscpu
[2025-10-12 17:45:45] 2025-10-12 21:44:51,469 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:45:45] 2025-10-12 21:44:51,983 | INFO     | monitor loop #319: job 0:6840428738 is in state 'finished'
[2025-10-12 17:45:45] 2025-10-12 21:44:51,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:45:45] 2025-10-12 21:44:52,479 | INFO     | time since job start (4279s) is within the limit (172800.0s)
[2025-10-12 17:45:45] 2025-10-12 21:44:54,484 | INFO     | time since job start (4281s) is within the limit (172800.0s)
[2025-10-12 17:45:45] 2025-10-12 21:44:54,485 | INFO     | monitor loop #320: job 0:6840428738 is in state 'finished'
[2025-10-12 17:45:45] 2025-10-12 21:44:54,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:45:45] 2025-10-12 21:44:55,602 | INFO     | PID=11099 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,210 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:45:45] 2025-10-12 21:44:56,214 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-12 17:45:45] 2025-10-12 21:44:56,215 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840428738/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,216 | INFO     | extracted standard info from prmon json
[2025-10-12 17:45:45] 2025-10-12 21:44:56,216 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:45:45] 2025-10-12 21:44:56,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:45:45] 2025-10-12 21:44:56,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:45:45] 2025-10-12 21:44:56,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:45:45] 2025-10-12 21:44:56,218 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:45:45] 2025-10-12 21:44:56,218 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | sum of deviations: -7728778324.0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | mean x: 1760303438.0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | mean y: 2844288.619047619
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | -- intersect: 175515222647.42896
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | intersect: 175515222647.42896
[2025-10-12 17:45:45] 2025-10-12 21:44:56,219 | INFO     | chi2: 0.05176224753104376
[2025-10-12 17:45:45] 2025-10-12 21:44:56,220 | INFO     | -- intersect: 175515222647.42896
[2025-10-12 17:45:45] 2025-10-12 21:44:56,220 | INFO     | current memory leak: -99.71 B/s (using 63 data points, chi2=0.05)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,220 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,220 | INFO     | ..............................
[2025-10-12 17:45:45] 2025-10-12 21:44:56,220 | INFO     | . Timing measurements:
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . get job = 0 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . initial setup = 2 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . payload setup = 7 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . stage-in = 0 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . payload execution = 4249 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . stage-out = 0 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | . log creation = 0 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,221 | INFO     | ..............................
[2025-10-12 17:45:45] 2025-10-12 21:44:56,603 | INFO     | time since job start (4283s) is within the limit (172800.0s)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,766 | INFO     | 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,766 | INFO     | job summary report
[2025-10-12 17:45:45] 2025-10-12 21:44:56,766 | INFO     | --------------------------------------------------
[2025-10-12 17:45:45] 2025-10-12 21:44:56,766 | INFO     | PanDA job id: 6840428738
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | task id: 46676269
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | errors: (none)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | pilot state: finished 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | transexitcode: 0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | exeerrorcode: 0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,767 | INFO     | exeerrordiag: 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | exitcode: 0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | exitmsg: OK
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | cpuconsumptiontime: 45703 s
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | nevents: 400
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | neventsw: 0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | pid: 17453
[2025-10-12 17:45:45] 2025-10-12 21:44:56,768 | INFO     | pgrp: 17453
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | corecount: 12
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | event service: False
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | sizes: {0: 2348684, 1: 2348883, 6: 2349145, 12: 2349173, 4260: 2375193, 4262: 2384191, 4263: 2384375, 4267: 2384569}
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | --------------------------------------------------
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | 
[2025-10-12 17:45:45] 2025-10-12 21:44:56,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:45:45] 2025-10-12 21:44:56,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:45:45] 2025-10-12 21:44:56,799 | INFO     | job 6840428738 has completed (purged errors)
[2025-10-12 17:45:45] 2025-10-12 21:44:56,799 | INFO     | overall cleanup function is called
[2025-10-12 17:45:45] 2025-10-12 21:44:57,807 | INFO     | --- collectZombieJob: --- 10, [17453]
[2025-10-12 17:45:45] 2025-10-12 21:44:57,807 | INFO     | zombie collector waiting for pid 17453
[2025-10-12 17:45:45] 2025-10-12 21:44:57,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:45:45] 2025-10-12 21:44:57,807 | INFO     | collected zombie processes
[2025-10-12 17:45:45] 2025-10-12 21:44:57,808 | INFO     | will attempt to kill all subprocesses of pid=17453
[2025-10-12 17:45:45] 2025-10-12 21:44:57,898 | INFO     | process IDs to be killed: [17453] (in reverse order)
[2025-10-12 17:45:45] 2025-10-12 21:44:57,950 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:45:45] 2025-10-12 21:44:57,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:45:45] 2025-10-12 21:44:57,954 | INFO     | did not find any defunct processes belonging to 17453
[2025-10-12 17:45:45] 2025-10-12 21:44:57,956 | INFO     | did not find any defunct processes belonging to 17453
[2025-10-12 17:45:45] 2025-10-12 21:44:57,956 | INFO     | ready for new job
[2025-10-12 17:45:45] 2025-10-12 21:44:57,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:45:45] 2025-10-12 21:44:57,958 | INFO     | ***************************************
[2025-10-12 17:45:45] 2025-10-12 21:44:57,958 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:45:45] 2025-10-12 21:44:57,958 | INFO     | ***************************************
[2025-10-12 17:45:45] 2025-10-12 21:44:57,958 | INFO     | 
[2025-10-12 17:45:45] 2025-10-12 21:44:57,959 | INFO     | architecture information:
[2025-10-12 17:45:45] 2025-10-12 21:44:57,959 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:45:45] 2025-10-12 21:44:57,973 | INFO     | cat /etc/os-release:
[2025-10-12 17:45:45] NAME="CentOS Linux"
[2025-10-12 17:45:45] VERSION="7 (Core)"
[2025-10-12 17:45:45] ID="centos"
[2025-10-12 17:45:45] ID_LIKE="rhel fedora"
[2025-10-12 17:45:45] VERSION_ID="7"
[2025-10-12 17:45:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:45:45] ANSI_COLOR="0;31"
[2025-10-12 17:45:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:45:45] HOME_URL="https://www.centos.org/"
[2025-10-12 17:45:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:45:45] 
[2025-10-12 17:45:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:45:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:45:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:45:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:45:45] 
[2025-10-12 17:45:45] 2025-10-12 21:44:57,973 | INFO     | ***************************************
[2025-10-12 17:45:45] 2025-10-12 21:44:58,476 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:45:45] 2025-10-12 21:44:58,493 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 17:45:45] 2025-10-12 21:44:58,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:45:45] 2025-10-12 21:44:58,493 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:45:45] 2025-10-12 21:44:58,494 | INFO     | update_server=False
[2025-10-12 17:45:45] 2025-10-12 21:44:58,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:45:45] 2025-10-12 21:44:58,494 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:45:45] 2025-10-12 21:44:58,494 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:45:45] 2025-10-12 21:44:58,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:45:45] 2025-10-12 21:44:58,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:45:45] 2025-10-12 21:44:58,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:45] 2025-10-12 21:44:58,495 | INFO     | aborting loop
[2025-10-12 17:45:45] 2025-10-12 21:44:59,043 | INFO     | all payload control threads have been joined
[2025-10-12 17:45:45] 2025-10-12 21:44:59,168 | INFO     | all data control threads have been joined
[2025-10-12 17:45:45] 2025-10-12 21:44:59,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:45:45] 2025-10-12 21:44:59,496 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:44:59,499 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:44:59,752 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:44:59,823 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:44:59,926 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,033 | INFO     | all job control threads have been joined
[2025-10-12 17:45:45] 2025-10-12 21:45:00,047 | INFO     | [payload] control thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,173 | INFO     | [data] control thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,210 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,526 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:00,971 | INFO     | [job] validate thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:01,038 | INFO     | [job] control thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:01,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:45:45] 2025-10-12 21:45:01,376 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:01,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:45:45] 2025-10-12 21:45:02,317 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:05,954 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:45:45] 2025-10-12 21:45:39,278 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:45:45] 2025-10-12 21:45:40,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826637551424)>', '<ExcThread(monitor, started 139826066085632)>']
[2025-10-12 17:45:45] 2025-10-12 21:45:40,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:45:45] 2025-10-12 21:45:40,694 | INFO     | [monitor] control thread has ended
[2025-10-12 17:45:45] 2025-10-12 21:45:45,681 | INFO     | all workflow threads have been joined
[2025-10-12 17:45:45] 2025-10-12 21:45:45,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:45:45] 2025-10-12 21:45:45,681 | INFO     | traces error code: 0
[2025-10-12 17:45:45] 2025-10-12 21:45:45,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:45:45] 2025-10-12 21:45:45,765 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:45:45] 2025-10-12 21:45:45,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:45:45] 2025-10-12 21:45:45,774 [wrapper] pilotpid: 11099
[2025-10-12 17:45:45] 2025-10-12 21:45:45,778 [wrapper] Pilot exit status: 0
[2025-10-12 17:45:45] 2025-10-12 21:45:45,795 [wrapper] pandaids: 6840428738
[2025-10-12 17:45:45] 2025-10-12 21:45:45,839 [wrapper] cleanup supervisor_pilot 30073 11100
[2025-10-12 17:45:45] 2025-10-12 21:45:45,843 [wrapper] Test setup, not cleaning
[2025-10-12 17:45:45] 2025-10-12 21:45:45,847 [wrapper] apfmon messages muted
[2025-10-12 17:45:45] 2025-10-12 21:45:45,850 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:45:45] 2025-10-12 21:45:45,854 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:45:45]  *** Error codes and diagnostics ***
[2025-10-12 17:45:45]     "exeErrorCode": 0,
[2025-10-12 17:45:45]     "exeErrorDiag": "",
[2025-10-12 17:45:45]     "pilotErrorCode": 0,
[2025-10-12 17:45:45]     "pilotErrorDiag": "",
[2025-10-12 17:45:45]  *** Listing of results directory ***
[2025-10-12 17:45:45] total 415120
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 13:07 queuedata.json
[2025-10-12 17:45:45] -rwx------ 1 boincer umatlas     36292 Oct 12 13:09 runpilot2-wrapper.sh
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:45:45] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:33 run_atlas
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:33 job.xml
[2025-10-12 17:45:45] -rw-r--r-- 2 boincer umatlas 223630462 Oct 12 16:33 EVNT.46676267._004798.pool.root.1
[2025-10-12 17:45:45] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:33 start_atlas.sh
[2025-10-12 17:45:45] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:33 shared
[2025-10-12 17:45:45] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 16:33 input.tar.gz
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:33 boinc_lockfile
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 16:33 pandaJob.out
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas    975536 Oct 12 16:33 agis_schedconf.cvmfs.json
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas   1560580 Oct 12 16:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:45:45] drwx------ 5 boincer umatlas      4096 Oct 12 16:33 pilot3
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 17:39 init_data.xml
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas 195563178 Oct 12 17:44 HITS.46676269._084322.pool.root.1
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas        95 Oct 12 17:44 pilot_heartbeat.json
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:44 boinc_task_state.xml
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas      1049 Oct 12 17:44 memory_monitor_summary.json
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas    366585 Oct 12 17:44 log.46676269._084322.job.log.tgz.1
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas      7859 Oct 12 17:44 heartbeat.json
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:45 boinc_mmap_file
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:45 wrapper_checkpoint.txt
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas      4552 Oct 12 17:45 pilotlog.txt
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas    624358 Oct 12 17:45 log.46676269._084322.job.log.1
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas       357 Oct 12 17:45 output.list
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:45 runtime_log
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas   1013760 Oct 12 17:45 result.tar.gz
[2025-10-12 17:45:45] -rw------- 1 boincer umatlas       659 Oct 12 17:45 UkONDmPkES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAnkNDmN5yRXo.diag
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 17:45 runtime_log.err
[2025-10-12 17:45:45] -rw-r--r-- 1 boincer umatlas     21722 Oct 12 17:45 stderr.txt
[2025-10-12 17:45:46] HITS file was successfully produced:
[2025-10-12 17:45:46] -rw------- 1 boincer umatlas 195563178 Oct 12 17:44 shared/HITS.pool.root.1
[2025-10-12 17:45:46]  *** Contents of shared directory: ***
[2025-10-12 17:45:46] total 410944
[2025-10-12 17:45:46] -rw-r--r-- 2 boincer umatlas 223630462 Oct 12 16:33 ATLAS.root_0
[2025-10-12 17:45:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:33 start_atlas.sh
[2025-10-12 17:45:46] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 16:33 input.tar.gz
[2025-10-12 17:45:46] -rw------- 1 boincer umatlas 195563178 Oct 12 17:44 HITS.pool.root.1
[2025-10-12 17:45:46] -rw------- 1 boincer umatlas   1013760 Oct 12 17:45 result.tar.gz
17:45:47 (7423): run_atlas exited; CPU time 45669.925400
17:45:47 (7423): called boinc_finish(0)

</stderr_txt>
]]>

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