Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:31 (1933): wrapper (7.7.26015): starting
16:36:31 (1933): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:36:31] Arguments: --nthreads 12
[2025-10-12 16:36:31] Threads: 12
[2025-10-12 16:36:31] Checking for CVMFS
[2025-10-12 16:36:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:36:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:36:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:36:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:36:31] 2.11.2.0 2998 39083 88348 151636 2 58 15197232 20275201 1 130560 0 24522288 99.991 1274742 44981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:36:31] CVMFS is ok
[2025-10-12 16:36:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:36:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:36:31] Further information can be found at the LHC@home message board.
[2025-10-12 16:36:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:36:31] Checking for apptainer binary...
[2025-10-12 16:36:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:36:31] Running /usr/bin/apptainer --version
[2025-10-12 16:36:31] apptainer version 1.3.2-1.el7
[2025-10-12 16:36:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:36:33] c-205-12.aglt2.org
[2025-10-12 16:36:33] apptainer works
[2025-10-12 16:36:33] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:36:33] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:36:33] Starting ATLAS job with PandaID=6840390947
[2025-10-12 16:36:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:49:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:49:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 17:49:01]  replicas=None
[2025-10-12 17:49:01]  scope=mc23_13p6TeV
[2025-10-12 17:49:01]  status=None
[2025-10-12 17:49:01]  status_code=0
[2025-10-12 17:49:01]  storage_token=
[2025-10-12 17:49:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840390947/log.46676269._083719.job.log.tgz.1
[2025-10-12 17:49:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/33/log.46676269._083719.job.log.tgz.1
[2025-10-12 17:49:01]  workdir=None
[2025-10-12 17:49:01] ]
[2025-10-12 17:49:01] 2025-10-12 21:47:56,410 | INFO     | transferring file log.46676269._083719.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840390947/log.46676269._083719.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 17:49:01] 2025-10-12 21:47:56,410 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840390947/log.46676269._083719.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._083719.job
[2025-10-12 17:49:01] 2025-10-12 21:47:56,434 | INFO     | adding to output.list: log.46676269._083719.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/33/log.46676269._083719.job.log.tg
[2025-10-12 17:49:01] 2025-10-12 21:47:56,435 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:49:01] 2025-10-12 21:47:56,436 | INFO     | summary of transferred files:
[2025-10-12 17:49:01] 2025-10-12 21:47:56,436 | INFO     |  -- lfn=log.46676269._083719.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:49:01] 2025-10-12 21:47:56,436 | INFO     | stage-out finished correctly
[2025-10-12 17:49:01] 2025-10-12 21:47:57,042 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:49:01] 2025-10-12 21:47:57,076 | INFO     | time since job start (4269s) is within the limit (172800.0s)
[2025-10-12 17:49:01] 2025-10-12 21:47:57,106 | INFO     | monitor loop #319: job 0:6840390947 is in state 'finished'
[2025-10-12 17:49:01] 2025-10-12 21:47:57,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:49:01] 2025-10-12 21:47:58,428 | INFO     | job 6840390947 has state=finished
[2025-10-12 17:49:01] 2025-10-12 21:47:58,428 | INFO     | preparing for final server update for job 6840390947 in state='finished'
[2025-10-12 17:49:01] 2025-10-12 21:47:58,428 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:49:01] 2025-10-12 21:47:58,429 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:49:01] 2025-10-12 21:47:58,429 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:49:01] 2025-10-12 21:47:58,429 | INFO     | job 6840390947 has finished - writing final server update
[2025-10-12 17:49:01] 2025-10-12 21:47:58,429 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:49:01] 2025-10-12 21:47:58,430 | INFO     | executing command: lscpu
[2025-10-12 17:49:01] 2025-10-12 21:47:58,457 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:49:01] 2025-10-12 21:47:59,082 | INFO     | time since job start (4271s) is within the limit (172800.0s)
[2025-10-12 17:49:01] 2025-10-12 21:47:59,609 | INFO     | monitor loop #320: job 0:6840390947 is in state 'finished'
[2025-10-12 17:49:01] 2025-10-12 21:47:59,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:49:01] 2025-10-12 21:48:01,088 | INFO     | time since job start (4273s) is within the limit (172800.0s)
[2025-10-12 17:49:01] 2025-10-12 21:48:02,112 | INFO     | monitor loop #321: job 0:6840390947 is in state 'finished'
[2025-10-12 17:49:01] 2025-10-12 21:48:02,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,090 | INFO     | time since job start (4275s) is within the limit (172800.0s)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,209 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:49:01] 2025-10-12 21:48:03,212 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-12 17:49:01] 2025-10-12 21:48:03,214 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840390947/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,214 | INFO     | extracted standard info from prmon json
[2025-10-12 17:49:01] 2025-10-12 21:48:03,214 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:49:01] 2025-10-12 21:48:03,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:49:01] 2025-10-12 21:48:03,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:49:01] 2025-10-12 21:48:03,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:49:01] 2025-10-12 21:48:03,216 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:49:01] 2025-10-12 21:48:03,217 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,217 | INFO     | sum of deviations: -7525936854.0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,217 | INFO     | mean x: 1760303633.0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,217 | INFO     | mean y: 2848178.6825396824
[2025-10-12 17:49:01] 2025-10-12 21:48:03,217 | INFO     | -- intersect: 170908930301.12567
[2025-10-12 17:49:01] 2025-10-12 21:48:03,218 | INFO     | intersect: 170908930301.12567
[2025-10-12 17:49:01] 2025-10-12 21:48:03,218 | INFO     | chi2: 0.051369990835217566
[2025-10-12 17:49:01] 2025-10-12 21:48:03,218 | INFO     | -- intersect: 170908930301.12567
[2025-10-12 17:49:01] 2025-10-12 21:48:03,218 | INFO     | current memory leak: -97.09 B/s (using 63 data points, chi2=0.05)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,218 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | ..............................
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . Timing measurements:
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . get job = 0 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . initial setup = 2 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . payload setup = 7 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . stage-in = 0 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . payload execution = 4239 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . stage-out = 0 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,219 | INFO     | . log creation = 0 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,220 | INFO     | ..............................
[2025-10-12 17:49:01] 2025-10-12 21:48:03,300 | INFO     | 
[2025-10-12 17:49:01] 2025-10-12 21:48:03,301 | INFO     | job summary report
[2025-10-12 17:49:01] 2025-10-12 21:48:03,301 | INFO     | --------------------------------------------------
[2025-10-12 17:49:01] 2025-10-12 21:48:03,301 | INFO     | PanDA job id: 6840390947
[2025-10-12 17:49:01] 2025-10-12 21:48:03,301 | INFO     | task id: 46676269
[2025-10-12 17:49:01] 2025-10-12 21:48:03,301 | INFO     | errors: (none)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | pilot state: finished 
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | transexitcode: 0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | exeerrorcode: 0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | exeerrordiag: 
[2025-10-12 17:49:01] 2025-10-12 21:48:03,302 | INFO     | exitcode: 0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | exitmsg: OK
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | cpuconsumptiontime: 45219 s
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | nevents: 400
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | neventsw: 0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | pid: 12117
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | pgrp: 12117
[2025-10-12 17:49:01] 2025-10-12 21:48:03,303 | INFO     | corecount: 12
[2025-10-12 17:49:01] 2025-10-12 21:48:03,304 | INFO     | event service: False
[2025-10-12 17:49:01] 2025-10-12 21:48:03,304 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4250: 2375196, 4252: 2384250, 4258: 2384388}
[2025-10-12 17:49:01] 2025-10-12 21:48:03,304 | INFO     | --------------------------------------------------
[2025-10-12 17:49:01] 2025-10-12 21:48:03,304 | INFO     | 
[2025-10-12 17:49:01] 2025-10-12 21:48:03,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:49:01] 2025-10-12 21:48:03,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:49:01] 2025-10-12 21:48:03,334 | INFO     | job 6840390947 has completed (purged errors)
[2025-10-12 17:49:01] 2025-10-12 21:48:03,335 | INFO     | overall cleanup function is called
[2025-10-12 17:49:01] 2025-10-12 21:48:04,340 | INFO     | --- collectZombieJob: --- 10, [12117]
[2025-10-12 17:49:01] 2025-10-12 21:48:04,340 | INFO     | zombie collector waiting for pid 12117
[2025-10-12 17:49:01] 2025-10-12 21:48:04,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:49:01] 2025-10-12 21:48:04,340 | INFO     | collected zombie processes
[2025-10-12 17:49:01] 2025-10-12 21:48:04,340 | INFO     | will attempt to kill all subprocesses of pid=12117
[2025-10-12 17:49:01] 2025-10-12 21:48:04,431 | INFO     | process IDs to be killed: [12117] (in reverse order)
[2025-10-12 17:49:01] 2025-10-12 21:48:04,482 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:49:01] 2025-10-12 21:48:04,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:49:01] 2025-10-12 21:48:04,486 | INFO     | did not find any defunct processes belonging to 12117
[2025-10-12 17:49:01] 2025-10-12 21:48:04,489 | INFO     | did not find any defunct processes belonging to 12117
[2025-10-12 17:49:01] 2025-10-12 21:48:04,490 | INFO     | ready for new job
[2025-10-12 17:49:01] 2025-10-12 21:48:04,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:49:01] 2025-10-12 21:48:04,491 | INFO     | ***************************************
[2025-10-12 17:49:01] 2025-10-12 21:48:04,491 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:49:01] 2025-10-12 21:48:04,491 | INFO     | ***************************************
[2025-10-12 17:49:01] 2025-10-12 21:48:04,491 | INFO     | 
[2025-10-12 17:49:01] 2025-10-12 21:48:04,492 | INFO     | architecture information:
[2025-10-12 17:49:01] 2025-10-12 21:48:04,493 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:49:01] 2025-10-12 21:48:04,509 | INFO     | cat /etc/os-release:
[2025-10-12 17:49:01] NAME="CentOS Linux"
[2025-10-12 17:49:01] VERSION="7 (Core)"
[2025-10-12 17:49:01] ID="centos"
[2025-10-12 17:49:01] ID_LIKE="rhel fedora"
[2025-10-12 17:49:01] VERSION_ID="7"
[2025-10-12 17:49:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:49:01] ANSI_COLOR="0;31"
[2025-10-12 17:49:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:49:01] HOME_URL="https://www.centos.org/"
[2025-10-12 17:49:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:49:01] 
[2025-10-12 17:49:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:49:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:49:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:49:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:49:01] 
[2025-10-12 17:49:01] 2025-10-12 21:48:04,509 | INFO     | ***************************************
[2025-10-12 17:49:01] 2025-10-12 21:48:05,012 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:49:01] 2025-10-12 21:48:05,033 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 17:49:01] 2025-10-12 21:48:05,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:49:01] 2025-10-12 21:48:05,034 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:49:01] 2025-10-12 21:48:05,034 | INFO     | update_server=False
[2025-10-12 17:49:01] 2025-10-12 21:48:05,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:49:01] 2025-10-12 21:48:05,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:49:01] 2025-10-12 21:48:05,035 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 17:49:01] 2025-10-12 21:48:05,035 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:49:01] 2025-10-12 21:48:05,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:49:01] 2025-10-12 21:48:05,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:49:01] 2025-10-12 21:48:05,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:49:01] 2025-10-12 21:48:05,227 | INFO     | all data control threads have been joined
[2025-10-12 17:49:01] 2025-10-12 21:48:05,447 | INFO     | all job control threads have been joined
[2025-10-12 17:49:01] 2025-10-12 21:48:05,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:49:01] 2025-10-12 21:48:05,626 | INFO     | aborting loop
[2025-10-12 17:49:01] 2025-10-12 21:48:06,014 | INFO     | all payload control threads have been joined
[2025-10-12 17:49:01] 2025-10-12 21:48:06,040 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,040 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,088 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,222 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,233 | INFO     | [data] control thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,452 | INFO     | [job] control thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,462 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,604 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:06,631 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,019 | INFO     | [payload] control thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,042 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,227 | INFO     | [job] validate thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,246 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,435 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:07,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:49:01] 2025-10-12 21:48:11,637 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:49:01] 2025-10-12 21:48:54,668 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:49:01] 2025-10-12 21:48:56,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044339836736)>', '<ExcThread(monitor, started 140043750455040)>']
[2025-10-12 17:49:01] 2025-10-12 21:48:57,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:49:01] 2025-10-12 21:48:57,262 | INFO     | [monitor] control thread has ended
[2025-10-12 17:49:01] 2025-10-12 21:49:01,489 | INFO     | all workflow threads have been joined
[2025-10-12 17:49:01] 2025-10-12 21:49:01,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:49:01] 2025-10-12 21:49:01,489 | INFO     | traces error code: 0
[2025-10-12 17:49:01] 2025-10-12 21:49:01,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:49:01] 2025-10-12 21:49:01,580 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:49:01] 2025-10-12 21:49:01,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:49:01] 2025-10-12 21:49:01,588 [wrapper] pilotpid: 5701
[2025-10-12 17:49:01] 2025-10-12 21:49:01,592 [wrapper] Pilot exit status: 0
[2025-10-12 17:49:01] 2025-10-12 21:49:01,609 [wrapper] pandaids: 6840390947
[2025-10-12 17:49:01] 2025-10-12 21:49:01,658 [wrapper] cleanup supervisor_pilot 28557 5702
[2025-10-12 17:49:01] 2025-10-12 21:49:01,662 [wrapper] Test setup, not cleaning
[2025-10-12 17:49:01] 2025-10-12 21:49:01,666 [wrapper] apfmon messages muted
[2025-10-12 17:49:01] 2025-10-12 21:49:01,670 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:49:01] 2025-10-12 21:49:01,674 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:49:01]  *** Error codes and diagnostics ***
[2025-10-12 17:49:01]     "exeErrorCode": 0,
[2025-10-12 17:49:01]     "exeErrorDiag": "",
[2025-10-12 17:49:01]     "pilotErrorCode": 0,
[2025-10-12 17:49:01]     "pilotErrorDiag": "",
[2025-10-12 17:49:01]  *** Listing of results directory ***
[2025-10-12 17:49:01] total 417496
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:37 queuedata.json
[2025-10-12 17:49:01] -rwx------ 1 boincer umatlas     36292 Oct 12 12:38 runpilot2-wrapper.sh
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:49:01] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:36 run_atlas
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:36 job.xml
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas 222089107 Oct 12 16:36 EVNT.46676267._004751.pool.root.1
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:36 start_atlas.sh
[2025-10-12 17:49:01] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:36 shared
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 16:36 input.tar.gz
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:36 boinc_lockfile
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:36 pandaJob.out
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas    975536 Oct 12 16:36 agis_schedconf.cvmfs.json
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas   1560580 Oct 12 16:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:49:01] drwx------ 5 boincer umatlas      4096 Oct 12 16:36 pilot3
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 17:45 init_data.xml
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas 199517717 Oct 12 17:47 HITS.46676269._083719.pool.root.1
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:47 boinc_task_state.xml
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas        95 Oct 12 17:47 pilot_heartbeat.json
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas      1049 Oct 12 17:47 memory_monitor_summary.json
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas    376415 Oct 12 17:47 log.46676269._083719.job.log.tgz.1
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas      7855 Oct 12 17:48 heartbeat.json
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:48 wrapper_checkpoint.txt
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:48 boinc_mmap_file
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas      4552 Oct 12 17:49 pilotlog.txt
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas    624412 Oct 12 17:49 log.46676269._083719.job.log.1
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas       357 Oct 12 17:49 output.list
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:49 runtime_log
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas   1024000 Oct 12 17:49 result.tar.gz
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 17:49 runtime_log.err
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas       659 Oct 12 17:49 PqZKDmRGES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmygkNDmgGQH5n.diag
[2025-10-12 17:49:01] -rw-r--r-- 1 boincer umatlas     21775 Oct 12 17:49 stderr.txt
[2025-10-12 17:49:01] HITS file was successfully produced:
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas 199517717 Oct 12 17:47 shared/HITS.pool.root.1
[2025-10-12 17:49:01]  *** Contents of shared directory: ***
[2025-10-12 17:49:01] total 413312
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas 222089107 Oct 12 16:36 ATLAS.root_0
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:36 start_atlas.sh
[2025-10-12 17:49:01] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 16:36 input.tar.gz
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas 199517717 Oct 12 17:47 HITS.pool.root.1
[2025-10-12 17:49:01] -rw------- 1 boincer umatlas   1024000 Oct 12 17:49 result.tar.gz
17:49:03 (1933): run_atlas exited; CPU time 45220.615277
17:49:03 (1933): called boinc_finish(0)

</stderr_txt>
]]>

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