Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:22:37 (1264496): wrapper (7.7.26015): starting
18:22:37 (1264496): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:22:37] Arguments: --nthreads 8
[2025-10-12 18:22:37] Threads: 8
[2025-10-12 18:22:37] Checking for CVMFS
[2025-10-12 18:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:22:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:22:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:22:39] 2.13.2.0 2531586 129855 801448 151640 0 100 27578434 32935936 42121 16776704 0 189195801 99.742 125176186 23415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 18:22:39] CVMFS is ok
[2025-10-12 18:22:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:22:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:22:39] Further information can be found at the LHC@home message board.
[2025-10-12 18:22:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:22:39] Checking for apptainer binary...
[2025-10-12 18:22:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:22:39] Running /usr/bin/apptainer --version
[2025-10-12 18:22:39] apptainer version 1.4.3-1.el9
[2025-10-12 18:22:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:22:40] c-1-3.aglt2.org
[2025-10-12 18:22:40] apptainer works
[2025-10-12 18:22:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:22:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:22:40] Starting ATLAS job with PandaID=6840538142
[2025-10-12 18:22:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:56:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:56:36] 2025-10-13 02:55:58,354 | INFO     | PID=1273440 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:56:36] 2025-10-13 02:55:58,354 | INFO     | .. there are 61 such processes running
[2025-10-12 22:56:36] 2025-10-13 02:55:58,773 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:56:36] 2025-10-13 02:55:58,783 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2717.7477874999995
[2025-10-12 22:56:36] 2025-10-13 02:55:58,831 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840538142/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:56:36] 2025-10-13 02:55:58,832 | INFO     | extracted standard info from prmon json
[2025-10-12 22:56:36] 2025-10-13 02:55:58,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:56:36] 2025-10-13 02:55:58,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:56:36] 2025-10-13 02:55:58,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:56:36] 2025-10-13 02:55:58,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:56:36] 2025-10-13 02:55:58,882 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:56:36] 2025-10-13 02:55:58,882 | INFO     | sum of square deviations: 5770783150.241531
[2025-10-12 22:56:36] 2025-10-13 02:55:58,884 | INFO     | sum of deviations: -92327845175.23778
[2025-10-12 22:56:36] 2025-10-13 02:55:58,884 | INFO     | mean x: 1760316022.4943397
[2025-10-12 22:56:36] 2025-10-13 02:55:58,884 | INFO     | mean y: 2162387.841509434
[2025-10-12 22:56:36] 2025-10-13 02:55:58,884 | INFO     | -- intersect: 28165789568.59
[2025-10-12 22:56:36] 2025-10-13 02:55:58,885 | INFO     | intersect: 28165789568.59
[2025-10-12 22:56:36] 2025-10-13 02:55:58,913 | INFO     | chi2: 3.384453272818361
[2025-10-12 22:56:36] 2025-10-13 02:55:58,914 | INFO     | sum of square deviations: 5450314768.996161
[2025-10-12 22:56:36] 2025-10-13 02:55:58,915 | INFO     | sum of deviations: -74833474435.66537
[2025-10-12 22:56:36] 2025-10-13 02:55:58,915 | INFO     | mean x: 1760315870.0038462
[2025-10-12 22:56:36] 2025-10-13 02:55:58,915 | INFO     | mean y: 2170608.6653846153
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | -- intersect: 24171518295.87997
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | intersect: 24171518295.87997
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | chi2: 2.7390990542065854
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | current chi2=2.7390990542065854 (change=19.068197034800985 %)
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | right removable region: 259
[2025-10-12 22:56:36] 2025-10-13 02:55:58,916 | INFO     | sum of square deviations: 5450234858.996161
[2025-10-12 22:56:36] 2025-10-13 02:55:58,944 | INFO     | sum of deviations: -136246266415.67686
[2025-10-12 22:56:36] 2025-10-13 02:55:58,944 | INFO     | mean x: 1760316175.0038462
[2025-10-12 22:56:36] 2025-10-13 02:55:58,945 | INFO     | mean y: 2183168.676923077
[2025-10-12 22:56:36] 2025-10-13 02:55:58,945 | INFO     | -- intersect: 44006985302.94183
[2025-10-12 22:56:36] 2025-10-13 02:55:58,945 | INFO     | intersect: 44006985302.94183
[2025-10-12 22:56:36] 2025-10-13 02:55:58,967 | INFO     | chi2: 1.5258550182678194
[2025-10-12 22:56:36] 2025-10-13 02:55:58,967 | INFO     | current chi2=1.5258550182678194 (change=54.91576052999595 %)
[2025-10-12 22:56:36] 2025-10-13 02:55:58,968 | INFO     | sum of square deviations: 5141779817.701995
[2025-10-12 22:56:36] 2025-10-13 02:55:58,969 | INFO     | sum of deviations: -143146089098.98044
[2025-10-12 22:56:36] 2025-10-13 02:55:58,969 | INFO     | mean x: 1760316327.5137255
[2025-10-12 22:56:36] 2025-10-13 02:55:58,969 | INFO     | mean y: 2186553.137254902
[2025-10-12 22:56:36] 2025-10-13 02:55:58,969 | INFO     | -- intersect: 49009029863.14265
[2025-10-12 22:56:36] 2025-10-13 02:55:58,969 | INFO     | intersect: 49009029863.14265
[2025-10-12 22:56:36] 2025-10-13 02:55:58,970 | INFO     | chi2: 1.388286607604897
[2025-10-12 22:56:36] 2025-10-13 02:55:58,970 | INFO     | current chi2=1.388286607604897 (change=9.015824505993553 %)
[2025-10-12 22:56:36] 2025-10-13 02:55:58,970 | INFO     | left removable region: 20
[2025-10-12 22:56:36] 2025-10-13 02:55:58,970 | INFO     | sum of square deviations: 4233439305.5146284
[2025-10-12 22:56:36] 2025-10-13 02:55:58,990 | INFO     | sum of deviations: -103748091152.14214
[2025-10-12 22:56:36] 2025-10-13 02:55:58,990 | INFO     | mean x: 1760316449.5313807
[2025-10-12 22:56:36] 2025-10-13 02:55:58,990 | INFO     | mean y: 2184134.552301255
[2025-10-12 22:56:36] 2025-10-13 02:55:59,013 | INFO     | -- intersect: 43141924256.65521
[2025-10-12 22:56:36] 2025-10-13 02:55:59,013 | INFO     | intersect: 43141924256.65521
[2025-10-12 22:56:36] 2025-10-13 02:55:59,013 | INFO     | chi2: 0.6939247234745538
[2025-10-12 22:56:36] 2025-10-13 02:55:59,014 | INFO     | -- intersect: 43141924256.65521
[2025-10-12 22:56:36] 2025-10-13 02:55:59,014 | INFO     | current memory leak: -24.51 B/s (using 239 data points, chi2=0.69)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,014 | INFO     | could have reported an average CPU frequency of 2721 MHz (12 samples)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,014 | INFO     | ..............................
[2025-10-12 22:56:36] 2025-10-13 02:55:59,014 | INFO     | . Timing measurements:
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . get job = 0 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . initial setup = 5 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . payload setup = 40 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . stage-in = 0 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . payload execution = 16161 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . stage-out = 5 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | . log creation = 0 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,015 | INFO     | ..............................
[2025-10-12 22:56:36] 2025-10-13 02:55:59,382 | INFO     | time since job start (16328s) is within the limit (172800.0s)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | 
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | job summary report
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | --------------------------------------------------
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | PanDA job id: 6840538142
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | task id: 46676269
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | errors: (none)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:56:36] 2025-10-13 02:55:59,743 | INFO     | pilot state: finished 
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | transexitcode: 0
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | exeerrorcode: 0
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | exeerrordiag: 
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | exitcode: 0
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | exitmsg: OK
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | cpuconsumptiontime: 45673 s
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | nevents: 400
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | neventsw: 0
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | pid: 1291296
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | pgrp: 1291296
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | corecount: 8
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | event service: False
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348713, 3: 2348769, 4: 2348968, 15: 2348968, 26: 2349124, 33: 2349414, 37: 2349470, 16206: 2380680, 16207: 2380679, 16214: 2390
[2025-10-12 22:56:36] 2025-10-13 02:55:59,744 | INFO     | --------------------------------------------------
[2025-10-12 22:56:36] 2025-10-13 02:55:59,745 | INFO     | 
[2025-10-12 22:56:36] 2025-10-13 02:55:59,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:56:36] 2025-10-13 02:55:59,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | job 6840538142 has completed (purged errors)
[2025-10-12 22:56:36] 2025-10-13 02:55:59,879 | INFO     | overall cleanup function is called
[2025-10-12 22:56:36] 2025-10-13 02:56:00,888 | INFO     | --- collectZombieJob: --- 10, [1291296]
[2025-10-12 22:56:36] 2025-10-13 02:56:00,888 | INFO     | zombie collector waiting for pid 1291296
[2025-10-12 22:56:36] 2025-10-13 02:56:00,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:56:36] 2025-10-13 02:56:00,888 | INFO     | collected zombie processes
[2025-10-12 22:56:36] 2025-10-13 02:56:00,888 | INFO     | will attempt to kill all subprocesses of pid=1291296
[2025-10-12 22:56:36] 2025-10-13 02:56:02,761 | INFO     | process IDs to be killed: [1291296] (in reverse order)
[2025-10-12 22:56:36] 2025-10-13 02:56:03,300 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:56:36] 2025-10-13 02:56:03,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:56:36] 2025-10-13 02:56:03,357 | INFO     | did not find any defunct processes belonging to 1291296
[2025-10-12 22:56:36] 2025-10-13 02:56:03,457 | INFO     | did not find any defunct processes belonging to 1291296
[2025-10-12 22:56:36] 2025-10-13 02:56:03,457 | INFO     | ready for new job
[2025-10-12 22:56:36] 2025-10-13 02:56:03,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:56:36] 2025-10-13 02:56:03,477 | INFO     | ***************************************
[2025-10-12 22:56:36] 2025-10-13 02:56:03,477 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:56:36] 2025-10-13 02:56:03,477 | INFO     | ***************************************
[2025-10-12 22:56:36] 2025-10-13 02:56:03,477 | INFO     | 
[2025-10-12 22:56:36] 2025-10-13 02:56:03,492 | INFO     | architecture information:
[2025-10-12 22:56:36] 2025-10-13 02:56:03,513 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:56:36] 2025-10-13 02:56:03,637 | INFO     | cat /etc/os-release:
[2025-10-12 22:56:36] NAME="CentOS Linux"
[2025-10-12 22:56:36] VERSION="7 (Core)"
[2025-10-12 22:56:36] ID="centos"
[2025-10-12 22:56:36] ID_LIKE="rhel fedora"
[2025-10-12 22:56:36] VERSION_ID="7"
[2025-10-12 22:56:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:56:36] ANSI_COLOR="0;31"
[2025-10-12 22:56:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:56:36] HOME_URL="https://www.centos.org/"
[2025-10-12 22:56:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:56:36] 
[2025-10-12 22:56:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:56:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:56:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:56:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:56:36] 
[2025-10-12 22:56:36] 2025-10-13 02:56:03,638 | INFO     | ***************************************
[2025-10-12 22:56:36] 2025-10-13 02:56:04,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | INFO     | sufficient remaining disk space (74963746816 B)
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | INFO     | update_server=False
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:56:36] 2025-10-13 02:56:04,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:56:36] 2025-10-13 02:56:04,372 | INFO     | aborting loop
[2025-10-12 22:56:36] 2025-10-13 02:56:04,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:56:36] 2025-10-13 02:56:04,995 | INFO     | all job control threads have been joined
[2025-10-12 22:56:36] 2025-10-13 02:56:05,126 | INFO     | all data control threads have been joined
[2025-10-12 22:56:36] 2025-10-13 02:56:05,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:56:36] 2025-10-13 02:56:05,222 | INFO     | all payload control threads have been joined
[2025-10-12 22:56:36] 2025-10-13 02:56:05,375 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:05,379 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:05,723 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:05,768 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:05,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:05,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,001 | INFO     | [job] control thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,018 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,062 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,131 | INFO     | [data] control thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,186 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,228 | INFO     | [payload] control thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,323 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:06,324 | INFO     | [job] validate thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:07,240 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:07,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:56:36] 2025-10-13 02:56:11,883 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:56:36] 2025-10-13 02:56:21,151 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:56:36] 2025-10-13 02:56:23,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485217118016)>', '<ExcThread(monitor, started 140484706014976)>']
[2025-10-12 22:56:36] 2025-10-13 02:56:28,235 | INFO     | all workflow threads have been joined
[2025-10-12 22:56:36] 2025-10-13 02:56:28,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:56:36] 2025-10-13 02:56:28,236 | INFO     | traces error code: 0
[2025-10-12 22:56:36] 2025-10-13 02:56:28,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:56:36] 2025-10-13 02:56:34,283 | INFO     | PID=1273440 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:56:36] 2025-10-13 02:56:34,284 | INFO     | .. there are 61 such processes running
[2025-10-12 22:56:36] 2025-10-13 02:56:34,284 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:56:36] 2025-10-13 02:56:34,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:56:36] 2025-10-13 02:56:34,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:56:36] 2025-10-13 02:56:34,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:56:36] 2025-10-13 02:56:34,285 | INFO     | [monitor] control thread has ended
[2025-10-12 22:56:36] 2025-10-13 02:56:34,953 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:56:36] 2025-10-13 02:56:34,988 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:56:36] 2025-10-13 02:56:35,007 [wrapper] pilotpid: 1273440
[2025-10-12 22:56:36] 2025-10-13 02:56:35,040 [wrapper] Pilot exit status: 0
[2025-10-12 22:56:36] 2025-10-13 02:56:35,158 [wrapper] pandaids: 6840538142
[2025-10-12 22:56:36] 2025-10-13 02:56:35,343 [wrapper] cleanup supervisor_pilot 2418633 1273441
[2025-10-12 22:56:36] 2025-10-13 02:56:35,361 [wrapper] Test setup, not cleaning
[2025-10-12 22:56:36] 2025-10-13 02:56:35,424 [wrapper] apfmon messages muted
[2025-10-12 22:56:36] 2025-10-13 02:56:35,469 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:56:36] 2025-10-13 02:56:35,518 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:56:36]  *** Error codes and diagnostics ***
[2025-10-12 22:56:36]     "exeErrorCode": 0,
[2025-10-12 22:56:36]     "exeErrorDiag": "",
[2025-10-12 22:56:36]     "pilotErrorCode": 0,
[2025-10-12 22:56:36]     "pilotErrorDiag": "",
[2025-10-12 22:56:36]  *** Listing of results directory ***
[2025-10-12 22:56:36] total 418796
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:04 queuedata.json
[2025-10-12 22:56:36] -rwx------. 1 boincer umatlas     36292 Oct 12 15:04 runpilot2-wrapper.sh
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:56:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:22 run_atlas
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:22 job.xml
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas 223084806 Oct 12 18:22 EVNT.46676267._004440.pool.root.1
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:22 start_atlas.sh
[2025-10-12 22:56:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:22 shared
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 18:22 input.tar.gz
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:22 boinc_lockfile
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 18:22 pandaJob.out
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas    975603 Oct 12 18:23 agis_schedconf.cvmfs.json
[2025-10-12 22:56:36] drwx------. 5 boincer umatlas      4096 Oct 12 18:23 pilot3
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas 197169930 Oct 12 22:53 HITS.46676269._087014.pool.root.1
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas       531 Oct 12 22:53 boinc_task_state.xml
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas      1043 Oct 12 22:54 memory_monitor_summary.json
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas   1560580 Oct 12 22:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas    468162 Oct 12 22:55 log.46676269._087014.job.log.tgz.1
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas        95 Oct 12 22:55 pilot_heartbeat.json
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas      7826 Oct 12 22:55 heartbeat.json
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 22:56 init_data.xml
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas        28 Oct 12 22:56 wrapper_checkpoint.txt
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas       823 Oct 12 22:56 pilotlog.txt
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:56 boinc_mmap_file
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas   1874295 Oct 12 22:56 log.46676269._087014.job.log.1
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas       357 Oct 12 22:56 output.list
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:56 runtime_log
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas   2365440 Oct 12 22:56 result.tar.gz
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas       653 Oct 12 22:56 zWDMDmHYGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzDlNDmctilEm.diag
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 22:56 runtime_log.err
[2025-10-12 22:56:36] -rw-r--r--. 1 boincer umatlas     21303 Oct 12 22:56 stderr.txt
[2025-10-12 22:56:36] HITS file was successfully produced:
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas 197169930 Oct 12 22:53 shared/HITS.pool.root.1
[2025-10-12 22:56:36]  *** Contents of shared directory: ***
[2025-10-12 22:56:36] total 413304
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas 223084806 Oct 12 18:22 ATLAS.root_0
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:22 start_atlas.sh
[2025-10-12 22:56:36] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 18:22 input.tar.gz
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas 197169930 Oct 12 22:53 HITS.pool.root.1
[2025-10-12 22:56:36] -rw-------. 1 boincer umatlas   2365440 Oct 12 22:56 result.tar.gz
22:56:37 (1264496): run_atlas exited; CPU time 46500.780248
22:56:37 (1264496): called boinc_finish(0)

</stderr_txt>
]]>

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