Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:34 (3456583): wrapper (7.7.26015): starting
08:27:34 (3456583): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:27:34] Arguments: --nthreads 3
[2025-10-13 08:27:34] Threads: 3
[2025-10-13 08:27:34] Checking for CVMFS
[2025-10-13 08:27:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:27:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:27:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:27:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:27:34] 2.9.2.0 1839474 5322 85696 151650 3 61 22992399 36864000 0 130560 0 4267034 99.991 182486 843 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 08:27:34] CVMFS is ok
[2025-10-13 08:27:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:27:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:27:34] Further information can be found at the LHC@home message board.
[2025-10-13 08:27:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:27:34] Checking for apptainer binary...
[2025-10-13 08:27:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:27:34] Running /usr/bin/apptainer --version
[2025-10-13 08:27:34] apptainer version 1.4.1-1.1
[2025-10-13 08:27:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:27:34] thA371b
[2025-10-13 08:27:34] apptainer works
[2025-10-13 08:27:34] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:27:34] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:27:34] Starting ATLAS job with PandaID=6840428655
[2025-10-13 08:27:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:47:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:47:05] VERSION="7 (Core)"
[2025-10-13 09:47:05] ID="centos"
[2025-10-13 09:47:05] ID_LIKE="rhel fedora"
[2025-10-13 09:47:05] VERSION_ID="7"
[2025-10-13 09:47:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:47:05] ANSI_COLOR="0;31"
[2025-10-13 09:47:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:47:05] HOME_URL="https://www.centos.org/"
[2025-10-13 09:47:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:47:05] 
[2025-10-13 09:47:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:47:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:47:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:47:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:47:05] 
[2025-10-13 09:47:05] 2025-10-13 07:46:34,760 | INFO     | ***************************************
[2025-10-13 09:47:05] 2025-10-13 07:46:35,263 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | INFO     | sufficient remaining disk space (236663603200 B)
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | INFO     | update_server=False
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:47:05] 2025-10-13 07:46:35,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:47:05] 2025-10-13 07:46:35,412 | INFO     | all payload control threads have been joined
[2025-10-13 09:47:05] 2025-10-13 07:46:35,473 | INFO     | all data control threads have been joined
[2025-10-13 09:47:05] 2025-10-13 07:46:35,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:47:05] 2025-10-13 07:46:35,701 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:47:05] 2025-10-13 07:46:35,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:47:05] 2025-10-13 07:46:35,701 | INFO     | will abort loop
[2025-10-13 09:47:05] 2025-10-13 07:46:36,177 | INFO     | all job control threads have been joined
[2025-10-13 09:47:05] 2025-10-13 07:46:36,282 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,299 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,376 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,407 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,418 | INFO     | [payload] control thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,478 | INFO     | [data] control thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,549 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:36,707 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:37,167 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:37,182 | INFO     | [job] control thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:37,253 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:37,280 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:37,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:47:05] 2025-10-13 07:46:37,749 | INFO     | [job] validate thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:38,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:47:05] 2025-10-13 07:46:39,269 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:41,420 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:47:05] 2025-10-13 07:46:45,323 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:47:05] 2025-10-13 07:46:46,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961201313600)>', '<ExcThread(monitor, started 139960919230208)>']
[2025-10-13 09:47:05] 2025-10-13 07:46:51,873 | INFO     | all workflow threads have been joined
[2025-10-13 09:47:05] 2025-10-13 07:46:51,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:47:05] 2025-10-13 07:46:51,875 | INFO     | traces error code: 0
[2025-10-13 09:47:05] 2025-10-13 07:46:51,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | INFO     | PID=3460307 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:47:05] 2025-10-13 07:47:05,145 | INFO     | [monitor] control thread has ended
[2025-10-13 09:47:05] 2025-10-13 07:47:05,192 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:47:05] 2025-10-13 07:47:05,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:47:05] 2025-10-13 07:47:05,196 [wrapper] pilotpid: 3460307
[2025-10-13 09:47:05] 2025-10-13 07:47:05,198 [wrapper] Pilot exit status: 0
[2025-10-13 09:47:05] 2025-10-13 07:47:05,205 [wrapper] pandaids: 6840428655
[2025-10-13 09:47:05] 2025-10-13 07:47:05,221 [wrapper] cleanup supervisor_pilot 3478687 3460308
[2025-10-13 09:47:05] 2025-10-13 07:47:05,223 [wrapper] Test setup, not cleaning
[2025-10-13 09:47:05] 2025-10-13 07:47:05,225 [wrapper] apfmon messages muted
[2025-10-13 09:47:05] 2025-10-13 07:47:05,228 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:47:05] 2025-10-13 07:47:05,230 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:47:05]  *** Error codes and diagnostics ***
[2025-10-13 09:47:05]     "exeErrorCode": 0,
[2025-10-13 09:47:05]     "exeErrorDiag": "",
[2025-10-13 09:47:05]     "pilotErrorCode": 0,
[2025-10-13 09:47:05]     "pilotErrorDiag": "",
[2025-10-13 09:47:05]  *** Listing of results directory ***
[2025-10-13 09:47:05] total 405956
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      5112 Oct 12 19:02 queuedata.json
[2025-10-13 09:47:05] -rwx------ 1 boinc boinc     36292 Oct 12 19:04 runpilot2-wrapper.sh
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:47:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:27 run_atlas
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:27 job.xml
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc 222112685 Oct 13 08:27 EVNT.46676267._004795.pool.root.1
[2025-10-13 09:47:05] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:27 shared
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc    569683 Oct 13 08:27 input.tar.gz
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:27 start_atlas.sh
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:27 boinc_setup_complete
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      6440 Oct 13 08:27 init_data.xml
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:27 boinc_lockfile
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:27 pandaJob.out
[2025-10-13 09:47:05] -rw------- 1 boinc boinc    973230 Oct 13 08:27 agis_schedconf.cvmfs.json
[2025-10-13 09:47:05] -rw------- 1 boinc boinc   1560580 Oct 13 08:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:47:05] drwx------ 5 boinc boinc      4096 Oct 13 08:27 pilot3
[2025-10-13 09:47:05] -rw------- 1 boinc boinc 187819390 Oct 13 09:46 HITS.46676269._084257.pool.root.1
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:46 boinc_task_state.xml
[2025-10-13 09:47:05] -rw------- 1 boinc boinc      1020 Oct 13 09:46 memory_monitor_summary.json
[2025-10-13 09:47:05] -rw------- 1 boinc boinc    241450 Oct 13 09:46 log.46676269._084257.job.log.tgz.1
[2025-10-13 09:47:05] -rw------- 1 boinc boinc      7753 Oct 13 09:46 heartbeat.json
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:46 wrapper_checkpoint.txt
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:46 boinc_mmap_file
[2025-10-13 09:47:05] -rw------- 1 boinc boinc       747 Oct 13 09:47 pilotlog.txt
[2025-10-13 09:47:05] -rw------- 1 boinc boinc        95 Oct 13 09:47 pilot_heartbeat.json
[2025-10-13 09:47:05] -rw------- 1 boinc boinc    697828 Oct 13 09:47 log.46676269._084257.job.log.1
[2025-10-13 09:47:05] -rw------- 1 boinc boinc       357 Oct 13 09:47 output.list
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:47 runtime_log
[2025-10-13 09:47:05] -rw------- 1 boinc boinc    962560 Oct 13 09:47 result.tar.gz
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      8782 Oct 13 09:47 runtime_log.err
[2025-10-13 09:47:05] -rw------- 1 boinc boinc       659 Oct 13 09:47 VGHNDmVfES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmelkNDmq15ufn.diag
[2025-10-13 09:47:05] -rw-r--r-- 1 boinc boinc      8895 Oct 13 09:47 stderr.txt
[2025-10-13 09:47:05] HITS file was successfully produced:
[2025-10-13 09:47:05] -rw------- 1 boinc boinc 187819390 Oct 13 09:46 shared/HITS.pool.root.1
[2025-10-13 09:47:05]  *** Contents of shared directory: ***
[2025-10-13 09:47:05] total 401852
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc 222112685 Oct 13 08:27 ATLAS.root_0
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc    569683 Oct 13 08:27 input.tar.gz
[2025-10-13 09:47:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:27 start_atlas.sh
[2025-10-13 09:47:05] -rw------- 1 boinc boinc 187819390 Oct 13 09:46 HITS.pool.root.1
[2025-10-13 09:47:05] -rw------- 1 boinc boinc    962560 Oct 13 09:47 result.tar.gz
09:47:07 (3456583): run_atlas exited; CPU time 13504.582805
09:47:07 (3456583): called boinc_finish(0)

</stderr_txt>
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