Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:43:04 (3469645): wrapper (7.7.26015): starting
18:43:04 (3469645): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:43:04] Arguments: --nthreads 8
[2025-10-12 18:43:04] Threads: 8
[2025-10-12 18:43:04] Checking for CVMFS
[2025-10-12 18:43:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:43:04] 2.13.2.0 240267 129735 216396 151640 0 551 34276575 39288832 7032 16776704 1 89610318 99.633 86449102 34940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:43:04] CVMFS is ok
[2025-10-12 18:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:43:04] Further information can be found at the LHC@home message board.
[2025-10-12 18:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:43:04] Checking for apptainer binary...
[2025-10-12 18:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:43:04] Running /usr/bin/apptainer --version
[2025-10-12 18:43:04] apptainer version 1.4.3-1.el9
[2025-10-12 18:43:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:43:04] c-211-2.aglt2.org
[2025-10-12 18:43:04] apptainer works
[2025-10-12 18:43:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:43:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:43:04] Starting ATLAS job with PandaID=6840538014
[2025-10-12 18:43:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:17:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:17:02] 2025-10-13 10:15:51,024 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:17:02] 2025-10-13 10:15:51,025 | INFO     | sum of square deviations: 97505633960.70572
[2025-10-13 06:17:02] 2025-10-13 10:15:51,103 | INFO     | monitor loop #2373: job 0:6840538014 is in state 'finished'
[2025-10-13 06:17:02] 2025-10-13 10:15:51,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:17:02] 2025-10-13 10:15:51,160 | INFO     | sum of deviations: -93282213188.2059
[2025-10-13 06:17:02] 2025-10-13 10:15:51,161 | INFO     | mean x: 1760329733.0882354
[2025-10-13 06:17:02] 2025-10-13 10:15:51,161 | INFO     | mean y: 2490702.636764706
[2025-10-13 06:17:02] 2025-10-13 10:15:51,161 | INFO     | -- intersect: 1686572398.9790413
[2025-10-13 06:17:02] 2025-10-13 10:15:51,161 | INFO     | intersect: 1686572398.9790413
[2025-10-13 06:17:02] 2025-10-13 10:15:51,162 | INFO     | chi2: 5.000840448291605
[2025-10-13 06:17:02] 2025-10-13 10:15:51,223 | INFO     | sum of square deviations: 95370919188.39403
[2025-10-13 06:17:02] 2025-10-13 10:15:51,285 | INFO     | sum of deviations: 122394527384.65796
[2025-10-13 06:17:02] 2025-10-13 10:15:51,285 | INFO     | mean x: 1760329580.597037
[2025-10-13 06:17:02] 2025-10-13 10:15:51,285 | INFO     | mean y: 2506109.928888889
[2025-10-13 06:17:02] 2025-10-13 10:15:51,285 | INFO     | -- intersect: -2256617623.9296694
[2025-10-13 06:17:02] 2025-10-13 10:15:51,285 | INFO     | intersect: -2256617623.9296694
[2025-10-13 06:17:02] 2025-10-13 10:15:51,286 | INFO     | chi2: 1.4564396809632358
[2025-10-13 06:17:02] 2025-10-13 10:15:51,287 | INFO     | current chi2=1.4564396809632358 (change=70.87610180683154 %)
[2025-10-13 06:17:02] 2025-10-13 10:15:51,330 | INFO     | sum of square deviations: 93267188593.44618
[2025-10-13 06:17:02] 2025-10-13 10:15:51,501 | INFO     | sum of deviations: 119946549416.52414
[2025-10-13 06:17:02] 2025-10-13 10:15:51,527 | INFO     | mean x: 1760329428.0910447
[2025-10-13 06:17:02] 2025-10-13 10:15:51,528 | INFO     | mean y: 2505933.2373134326
[2025-10-13 06:17:02] 2025-10-13 10:15:51,528 | INFO     | -- intersect: -2261371041.293054
[2025-10-13 06:17:02] 2025-10-13 10:15:51,528 | INFO     | intersect: -2261371041.293054
[2025-10-13 06:17:02] 2025-10-13 10:15:51,529 | INFO     | chi2: 1.4553058656791118
[2025-10-13 06:17:02] 2025-10-13 10:15:51,529 | INFO     | current chi2=1.4553058656791118 (change=0.07784842029119779 %)
[2025-10-13 06:17:02] 2025-10-13 10:15:51,529 | INFO     | right removable region: 669
[2025-10-13 06:17:02] 2025-10-13 10:15:51,530 | INFO     | sum of square deviations: 95370343588.00015
[2025-10-13 06:17:02] 2025-10-13 10:15:51,668 | INFO     | sum of deviations: -188912069952.9999
[2025-10-13 06:17:02] 2025-10-13 10:15:51,668 | INFO     | mean x: 1760329885.6
[2025-10-13 06:17:02] 2025-10-13 10:15:51,668 | INFO     | mean y: 2497509.074074074
[2025-10-13 06:17:02] 2025-10-13 10:15:51,668 | INFO     | -- intersect: 3489404968.749682
[2025-10-13 06:17:02] 2025-10-13 10:15:51,669 | INFO     | intersect: 3489404968.749682
[2025-10-13 06:17:02] 2025-10-13 10:15:51,703 | INFO     | chi2: 3.7174940538511048
[2025-10-13 06:17:02] 2025-10-13 10:15:51,703 | INFO     | current chi2=3.7174940538511048 (change=25.662614268745948 %)
[2025-10-13 06:17:02] 2025-10-13 10:15:51,704 | INFO     | sum of square deviations: 93266531505.04616
[2025-10-13 06:17:02] 2025-10-13 10:15:51,838 | INFO     | sum of deviations: -204522704094.64627
[2025-10-13 06:17:02] 2025-10-13 10:15:51,839 | INFO     | mean x: 1760330038.1089551
[2025-10-13 06:17:02] 2025-10-13 10:15:51,839 | INFO     | mean y: 2498640.091044776
[2025-10-13 06:17:02] 2025-10-13 10:15:51,839 | INFO     | -- intersect: 3862698581.9490314
[2025-10-13 06:17:02] 2025-10-13 10:15:51,839 | INFO     | intersect: 3862698581.9490314
[2025-10-13 06:17:02] 2025-10-13 10:15:51,840 | INFO     | chi2: 3.6949292892074257
[2025-10-13 06:17:02] 2025-10-13 10:15:51,841 | INFO     | current chi2=3.6949292892074257 (change=0.606988587387337 %)
[2025-10-13 06:17:02] 2025-10-13 10:15:51,841 | INFO     | left removable region: 20
[2025-10-13 06:17:02] 2025-10-13 10:15:51,850 | INFO     | sum of square deviations: 84768819982.75511
[2025-10-13 06:17:02] 2025-10-13 10:15:51,963 | INFO     | sum of deviations: 29312027296.021606
[2025-10-13 06:17:02] 2025-10-13 10:15:51,963 | INFO     | mean x: 1760330007.6209552
[2025-10-13 06:17:02] 2025-10-13 10:15:52,013 | INFO     | mean y: 2512506.6748844376
[2025-10-13 06:17:02] 2025-10-13 10:15:52,014 | INFO     | -- intersect: -606188207.147584
[2025-10-13 06:17:02] 2025-10-13 10:15:52,014 | INFO     | intersect: -606188207.147584
[2025-10-13 06:17:02] 2025-10-13 10:15:52,015 | INFO     | chi2: 0.1041683696466372
[2025-10-13 06:17:02] 2025-10-13 10:15:52,015 | INFO     | -- intersect: -606188207.147584
[2025-10-13 06:17:02] 2025-10-13 10:15:52,015 | INFO     | current memory leak: 0.35 B/s (using 649 data points, chi2=0.10)
[2025-10-13 06:17:02] 2025-10-13 10:15:52,016 | INFO     | could have reported an average CPU frequency of 2597 MHz (26 samples)
[2025-10-13 06:17:02] 2025-10-13 10:15:52,017 | INFO     | ..............................
[2025-10-13 06:17:02] 2025-10-13 10:15:52,017 | INFO     | . Timing measurements:
[2025-10-13 06:17:02] 2025-10-13 10:15:52,017 | INFO     | . get job = 0 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,017 | INFO     | . initial setup = 2 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,031 | INFO     | . payload setup = 5 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,031 | INFO     | . stage-in = 0 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,032 | INFO     | . payload execution = 41449 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,032 | INFO     | . stage-out = 16 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,032 | INFO     | . log creation = 5 s
[2025-10-13 06:17:02] 2025-10-13 10:15:52,032 | INFO     | ..............................
[2025-10-13 06:17:02] 2025-10-13 10:15:52,547 | INFO     | time since job start (41556s) is within the limit (172800.0s)
[2025-10-13 06:17:02] 2025-10-13 10:15:53,645 | INFO     | 
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | job summary report
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | --------------------------------------------------
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | PanDA job id: 6840538014
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | task id: 46676269
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | errors: (none)
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | pilot state: finished 
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | transexitcode: 0
[2025-10-13 06:17:02] 2025-10-13 10:15:53,646 | INFO     | exeerrorcode: 0
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | exeerrordiag: 
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | exitcode: 0
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | exitmsg: OK
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | cpuconsumptiontime: 52676 s
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | nevents: 400
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | neventsw: 0
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | pid: 3487899
[2025-10-13 06:17:02] 2025-10-13 10:15:53,647 | INFO     | pgrp: 3487899
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | corecount: 8
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | event service: False
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | sizes: {0: 2348630, 1: 2348885, 5: 2349147, 12: 2349203, 41463: 2392399, 41465: 2392398, 41483: 2401580, 41484: 2401636, 41542: 2401830}
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | --------------------------------------------------
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | 
[2025-10-13 06:17:02] 2025-10-13 10:15:53,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 06:17:02] 2025-10-13 10:15:54,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:17:02] 2025-10-13 10:15:54,038 | INFO     | job 6840538014 has completed (purged errors)
[2025-10-13 06:17:02] 2025-10-13 10:15:54,038 | INFO     | overall cleanup function is called
[2025-10-13 06:17:02] 2025-10-13 10:15:55,101 | INFO     | --- collectZombieJob: --- 10, [3487899]
[2025-10-13 06:17:02] 2025-10-13 10:15:55,101 | INFO     | zombie collector waiting for pid 3487899
[2025-10-13 06:17:02] 2025-10-13 10:15:55,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:17:02] 2025-10-13 10:15:55,102 | INFO     | collected zombie processes
[2025-10-13 06:17:02] 2025-10-13 10:15:55,102 | INFO     | will attempt to kill all subprocesses of pid=3487899
[2025-10-13 06:17:02] 2025-10-13 10:15:59,688 | INFO     | process IDs to be killed: [3487899] (in reverse order)
[2025-10-13 06:17:02] 2025-10-13 10:16:00,151 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:17:02] 2025-10-13 10:16:00,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:17:02] 2025-10-13 10:16:00,224 | INFO     | did not find any defunct processes belonging to 3487899
[2025-10-13 06:17:02] 2025-10-13 10:16:00,365 | INFO     | did not find any defunct processes belonging to 3487899
[2025-10-13 06:17:02] 2025-10-13 10:16:00,366 | INFO     | ready for new job
[2025-10-13 06:17:02] 2025-10-13 10:16:00,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:17:02] 2025-10-13 10:16:00,381 | INFO     | ***************************************
[2025-10-13 06:17:02] 2025-10-13 10:16:00,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:17:02] 2025-10-13 10:16:00,381 | INFO     | ***************************************
[2025-10-13 06:17:02] 2025-10-13 10:16:00,381 | INFO     | 
[2025-10-13 06:17:02] 2025-10-13 10:16:00,383 | INFO     | architecture information:
[2025-10-13 06:17:02] 2025-10-13 10:16:00,424 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:17:02] 2025-10-13 10:16:00,679 | INFO     | cat /etc/os-release:
[2025-10-13 06:17:02] NAME="CentOS Linux"
[2025-10-13 06:17:02] VERSION="7 (Core)"
[2025-10-13 06:17:02] ID="centos"
[2025-10-13 06:17:02] ID_LIKE="rhel fedora"
[2025-10-13 06:17:02] VERSION_ID="7"
[2025-10-13 06:17:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:17:02] ANSI_COLOR="0;31"
[2025-10-13 06:17:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:17:02] HOME_URL="https://www.centos.org/"
[2025-10-13 06:17:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:17:02] 
[2025-10-13 06:17:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:17:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:17:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:17:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:17:02] 
[2025-10-13 06:17:02] 2025-10-13 10:16:00,680 | INFO     | ***************************************
[2025-10-13 06:17:02] 2025-10-13 10:16:01,183 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 06:17:02] 2025-10-13 10:16:01,410 | INFO     | sufficient remaining disk space (52365885440 B)
[2025-10-13 06:17:02] 2025-10-13 10:16:01,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:17:02] 2025-10-13 10:16:01,410 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:17:02] 2025-10-13 10:16:01,410 | INFO     | update_server=False
[2025-10-13 06:17:02] 2025-10-13 10:16:01,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:17:02] 2025-10-13 10:16:01,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:17:02] 2025-10-13 10:16:01,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:17:02] 2025-10-13 10:16:01,966 | INFO     | all data control threads have been joined
[2025-10-13 06:17:02] 2025-10-13 10:16:02,270 | INFO     | all payload control threads have been joined
[2025-10-13 06:17:02] 2025-10-13 10:16:02,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:17:02] 2025-10-13 10:16:02,334 | INFO     | aborting loop
[2025-10-13 06:17:02] 2025-10-13 10:16:02,416 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,568 | INFO     | all job control threads have been joined
[2025-10-13 06:17:02] 2025-10-13 10:16:02,803 | INFO     | [job] validate thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,809 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,810 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,972 | INFO     | [data] control thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:02,980 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:17:02] 2025-10-13 10:16:03,040 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,276 | INFO     | [payload] control thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,339 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,441 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,492 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,574 | INFO     | [job] control thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:03,694 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:04,041 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:05,437 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:17:02] 2025-10-13 10:16:30,511 | INFO     | PID=3473345 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:17:02] 2025-10-13 10:16:30,511 | INFO     | .. there are 8 such processes running
[2025-10-13 06:17:02] 2025-10-13 10:16:30,512 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:17:02] 2025-10-13 10:16:30,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:17:02] 2025-10-13 10:16:30,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:17:02] 2025-10-13 10:16:32,648 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:17:02] 2025-10-13 10:16:32,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599233300288)>', '<ExcThread(monitor, started 140598749153024)>']
[2025-10-13 06:17:02] 2025-10-13 10:16:33,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:17:02] 2025-10-13 10:16:33,529 | INFO     | [monitor] control thread has ended
[2025-10-13 06:17:02] 2025-10-13 10:16:37,838 | INFO     | all workflow threads have been joined
[2025-10-13 06:17:02] 2025-10-13 10:16:37,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:17:02] 2025-10-13 10:16:37,839 | INFO     | traces error code: 0
[2025-10-13 06:17:02] 2025-10-13 10:16:37,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:17:02] 2025-10-13 10:16:39,944 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:17:02] 2025-10-13 10:16:40,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:17:02] 2025-10-13 10:16:40,078 [wrapper] pilotpid: 3473345
[2025-10-13 06:17:02] 2025-10-13 10:16:40,132 [wrapper] Pilot exit status: 0
[2025-10-13 06:17:02] 2025-10-13 10:16:40,452 [wrapper] pandaids: 6840538014
[2025-10-13 06:17:02] 2025-10-13 10:16:43,224 [wrapper] cleanup supervisor_pilot  240986 3473346
[2025-10-13 06:17:02] 2025-10-13 10:16:43,270 [wrapper] Test setup, not cleaning
[2025-10-13 06:17:02] 2025-10-13 10:16:43,326 [wrapper] apfmon messages muted
[2025-10-13 06:17:02] 2025-10-13 10:16:43,374 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:17:02] 2025-10-13 10:16:43,438 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:17:02]  *** Error codes and diagnostics ***
[2025-10-13 06:17:02]     "exeErrorCode": 0,
[2025-10-13 06:17:02]     "exeErrorDiag": "",
[2025-10-13 06:17:02]     "pilotErrorCode": 0,
[2025-10-13 06:17:02]     "pilotErrorDiag": "",
[2025-10-13 06:17:02]  *** Listing of results directory ***
[2025-10-13 06:17:02] total 419192
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:02 queuedata.json
[2025-10-13 06:17:02] -rwx------. 1 boincer umatlas     36292 Oct 12 15:02 runpilot2-wrapper.sh
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:17:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:43 run_atlas
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:43 job.xml
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas 219301087 Oct 12 18:43 EVNT.46676267._004435.pool.root.1
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:43 start_atlas.sh
[2025-10-13 06:17:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:43 shared
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:43 input.tar.gz
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:43 boinc_lockfile
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:43 pandaJob.out
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas    975603 Oct 12 18:43 agis_schedconf.cvmfs.json
[2025-10-13 06:17:02] drwx------. 5 boincer umatlas      4096 Oct 12 18:43 pilot3
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas 194475012 Oct 13 06:08 HITS.46676269._086886.pool.root.1
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:09 boinc_task_state.xml
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 06:13 init_data.xml
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas      1055 Oct 13 06:14 memory_monitor_summary.json
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas    784297 Oct 13 06:14 log.46676269._086886.job.log.tgz.1
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas      7843 Oct 13 06:15 heartbeat.json
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas        95 Oct 13 06:15 pilot_heartbeat.json
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas      4823 Oct 13 06:16 pilotlog.txt
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas   4999551 Oct 13 06:16 log.46676269._086886.job.log.1
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas       357 Oct 13 06:16 output.list
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:16 runtime_log
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas   5806080 Oct 13 06:16 result.tar.gz
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 06:16 runtime_log.err
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas       662 Oct 13 06:16 cNkLDmKWGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCDlNDmz4RE3m.diag
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:17 boinc_mmap_file
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:17 wrapper_checkpoint.txt
[2025-10-13 06:17:02] -rw-r--r--. 1 boincer umatlas     21068 Oct 13 06:17 stderr.txt
[2025-10-13 06:17:02] HITS file was successfully produced:
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas 194475012 Oct 13 06:08 shared/HITS.pool.root.1
[2025-10-13 06:17:02]  *** Contents of shared directory: ***
[2025-10-13 06:17:02] total 410336
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas 219301087 Oct 12 18:43 ATLAS.root_0
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:43 start_atlas.sh
[2025-10-13 06:17:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 18:43 input.tar.gz
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas 194475012 Oct 13 06:08 HITS.pool.root.1
[2025-10-13 06:17:02] -rw-------. 1 boincer umatlas   5806080 Oct 13 06:16 result.tar.gz
06:17:04 (3469645): run_atlas exited; CPU time 53582.095236
06:17:04 (3469645): called boinc_finish(0)

</stderr_txt>
]]>

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