Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:30:04 (2172090): wrapper (7.7.26015): starting
16:30:04 (2172090): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 16:30:04] Arguments: --nthreads 4
[2025-10-12 16:30:04] Threads: 4
[2025-10-12 16:30:04] Checking for CVMFS
[2025-10-12 16:30:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:30:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:30:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:30:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:30:05] 2.13.2.0 3732220 7055 59996 151636 1 188 2692914 4096000 11084 130560 0 49212628 99.999 373070 1287 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 16:30:05] CVMFS is ok
[2025-10-12 16:30:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:30:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 16:30:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 16:30:05] Further information can be found at the LHC@home message board.
[2025-10-12 16:30:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:30:05] Checking for apptainer binary...
[2025-10-12 16:30:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:30:05] Running /usr/bin/apptainer --version
[2025-10-12 16:30:05] apptainer version 1.4.3
[2025-10-12 16:30:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:30:05] T7810-Ubuntu
[2025-10-12 16:30:05] apptainer works
[2025-10-12 16:30:05] Set ATHENA_PROC_NUMBER=4
[2025-10-12 16:30:05] Set ATHENA_CORE_NUMBER=4
[2025-10-12 16:30:05] Starting ATLAS job with PandaID=6840223764
[2025-10-12 16:30:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:53:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:53:44] 2025-10-12 23:52:49,792 | INFO     | time since job start (12151s) is within the limit (172800.0s)
[2025-10-12 19:53:44] 2025-10-12 23:52:49,811 | INFO     | monitor loop #871: job 0:6840223764 is in state 'finished'
[2025-10-12 19:53:44] 2025-10-12 23:52:49,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,047 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:53:44] 2025-10-12 23:52:51,061 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2682.456150000001
[2025-10-12 19:53:44] 2025-10-12 23:52:51,073 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/15/PanDA_Pilot-6840223764/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,073 | INFO     | extracted standard info from prmon json
[2025-10-12 19:53:44] 2025-10-12 23:52:51,074 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:53:44] 2025-10-12 23:52:51,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:53:44] 2025-10-12 23:52:51,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:53:44] 2025-10-12 23:52:51,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:53:44] 2025-10-12 23:52:51,078 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:53:44] 2025-10-12 23:52:51,079 | INFO     | sum of square deviations: 2443580700.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,080 | INFO     | sum of deviations: 19541120091.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,081 | INFO     | mean x: 1760307084.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,081 | INFO     | mean y: 2296357.487437186
[2025-10-12 19:53:44] 2025-10-12 23:52:51,081 | INFO     | -- intersect: -14074739087.047718
[2025-10-12 19:53:44] 2025-10-12 23:52:51,081 | INFO     | intersect: -14074739087.047718
[2025-10-12 19:53:44] 2025-10-12 23:52:51,081 | INFO     | chi2: 1.4629543280129387
[2025-10-12 19:53:44] 2025-10-12 23:52:51,082 | INFO     | sum of square deviations: 2263977332.5
[2025-10-12 19:53:44] 2025-10-12 23:52:51,083 | INFO     | sum of deviations: 19058465765.000008
[2025-10-12 19:53:44] 2025-10-12 23:52:51,083 | INFO     | mean x: 1760306931.5
[2025-10-12 19:53:44] 2025-10-12 23:52:51,084 | INFO     | mean y: 2295947.6288659796
[2025-10-12 19:53:44] 2025-10-12 23:52:51,084 | INFO     | -- intersect: -14816204621.384657
[2025-10-12 19:53:44] 2025-10-12 23:52:51,084 | INFO     | intersect: -14816204621.384657
[2025-10-12 19:53:44] 2025-10-12 23:52:51,084 | INFO     | chi2: 1.463934318494788
[2025-10-12 19:53:44] 2025-10-12 23:52:51,084 | INFO     | current chi2=1.463934318494788 (change=-0.0669870865470109 %)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,085 | INFO     | right removable region: 193
[2025-10-12 19:53:44] 2025-10-12 23:52:51,085 | INFO     | sum of square deviations: 2263977332.5
[2025-10-12 19:53:44] 2025-10-12 23:52:51,086 | INFO     | sum of deviations: -8691313001.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,086 | INFO     | mean x: 1760307236.5
[2025-10-12 19:53:44] 2025-10-12 23:52:51,086 | INFO     | mean y: 2320060.175257732
[2025-10-12 19:53:44] 2025-10-12 23:52:51,087 | INFO     | -- intersect: 6760064915.090598
[2025-10-12 19:53:44] 2025-10-12 23:52:51,087 | INFO     | intersect: 6760064915.090598
[2025-10-12 19:53:44] 2025-10-12 23:52:51,087 | INFO     | chi2: 0.009293684903612561
[2025-10-12 19:53:44] 2025-10-12 23:52:51,087 | INFO     | current chi2=0.009293684903612561 (change=99.36473171269566 %)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,088 | INFO     | sum of square deviations: 2093397390.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,089 | INFO     | sum of deviations: -8753973665.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,089 | INFO     | mean x: 1760307389.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,089 | INFO     | mean y: 2320111.6296296297
[2025-10-12 19:53:44] 2025-10-12 23:52:51,089 | INFO     | -- intersect: 7363409123.788431
[2025-10-12 19:53:44] 2025-10-12 23:52:51,089 | INFO     | intersect: 7363409123.788431
[2025-10-12 19:53:44] 2025-10-12 23:52:51,090 | INFO     | chi2: 0.008563104063850689
[2025-10-12 19:53:44] 2025-10-12 23:52:51,090 | INFO     | current chi2=0.008563104063850689 (change=7.861045939677679 %)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,090 | INFO     | left removable region: 20
[2025-10-12 19:53:44] 2025-10-12 23:52:51,090 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | sum of deviations: -6745846345.000001
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | mean x: 1760307511.0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | mean y: 2318557.092485549
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | -- intersect: 7398758998.034062
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | intersect: 7398758998.034062
[2025-10-12 19:53:44] 2025-10-12 23:52:51,092 | INFO     | chi2: 0.007994372478218052
[2025-10-12 19:53:44] 2025-10-12 23:52:51,093 | INFO     | -- intersect: 7398758998.034062
[2025-10-12 19:53:44] 2025-10-12 23:52:51,093 | INFO     | current memory leak: -4.20 B/s (using 173 data points, chi2=0.01)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,093 | INFO     | could have reported an average CPU frequency of 2651 MHz (10 samples)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | ..............................
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . Timing measurements:
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . get job = 0 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . initial setup = 3 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . payload setup = 5 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . stage-in = 0 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . payload execution = 12116 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . stage-out = 2 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,094 | INFO     | . log creation = 0 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,095 | INFO     | ..............................
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | 
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | job summary report
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | --------------------------------------------------
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | PanDA job id: 6840223764
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | task id: 46676269
[2025-10-12 19:53:44] 2025-10-12 23:52:51,204 | INFO     | errors: (none)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | pilot state: finished 
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | transexitcode: 0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | exeerrorcode: 0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | exeerrordiag: 
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | exitcode: 0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | exitmsg: OK
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | cpuconsumptiontime: 47399 s
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | nevents: 400
[2025-10-12 19:53:44] 2025-10-12 23:52:51,205 | INFO     | neventsw: 0
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | pid: 2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | pgrp: 2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | corecount: 4
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | event service: False
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | sizes: {0: 2348028, 1: 2348899, 6: 2349161, 12: 2349189, 12126: 2378702, 12129: 2387730, 12132: 2387914, 12137: 2388108}
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | --------------------------------------------------
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | 
[2025-10-12 19:53:44] 2025-10-12 23:52:51,206 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/15
[2025-10-12 19:53:44] 2025-10-12 23:52:51,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:53:44] 2025-10-12 23:52:51,231 | INFO     | job 6840223764 has completed (purged errors)
[2025-10-12 19:53:44] 2025-10-12 23:52:51,231 | INFO     | overall cleanup function is called
[2025-10-12 19:53:44] 2025-10-12 23:52:52,239 | INFO     | --- collectZombieJob: --- 10, [2199037]
[2025-10-12 19:53:44] 2025-10-12 23:52:52,239 | INFO     | zombie collector waiting for pid 2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:52,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:53:44] 2025-10-12 23:52:52,239 | INFO     | collected zombie processes
[2025-10-12 19:53:44] 2025-10-12 23:52:52,239 | INFO     | will attempt to kill all subprocesses of pid=2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:52,609 | INFO     | process IDs to be killed: [2199037] (in reverse order)
[2025-10-12 19:53:44] 2025-10-12 23:52:52,729 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:53:44] 2025-10-12 23:52:52,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:53:44] 2025-10-12 23:52:52,742 | INFO     | did not find any defunct processes belonging to 2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:52,751 | INFO     | did not find any defunct processes belonging to 2199037
[2025-10-12 19:53:44] 2025-10-12 23:52:52,752 | INFO     | ready for new job
[2025-10-12 19:53:44] 2025-10-12 23:52:52,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:53:44] 2025-10-12 23:52:52,754 | INFO     | ***************************************
[2025-10-12 19:53:44] 2025-10-12 23:52:52,754 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:53:44] 2025-10-12 23:52:52,754 | INFO     | ***************************************
[2025-10-12 19:53:44] 2025-10-12 23:52:52,755 | INFO     | 
[2025-10-12 19:53:44] 2025-10-12 23:52:52,758 | INFO     | architecture information:
[2025-10-12 19:53:44] 2025-10-12 23:52:52,758 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:53:44] 2025-10-12 23:52:52,776 | INFO     | cat /etc/os-release:
[2025-10-12 19:53:44] NAME="CentOS Linux"
[2025-10-12 19:53:44] VERSION="7 (Core)"
[2025-10-12 19:53:44] ID="centos"
[2025-10-12 19:53:44] ID_LIKE="rhel fedora"
[2025-10-12 19:53:44] VERSION_ID="7"
[2025-10-12 19:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:53:44] ANSI_COLOR="0;31"
[2025-10-12 19:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:53:44] HOME_URL="https://www.centos.org/"
[2025-10-12 19:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:53:44] 
[2025-10-12 19:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:53:44] 
[2025-10-12 19:53:44] 2025-10-12 23:52:52,777 | INFO     | ***************************************
[2025-10-12 19:53:44] 2025-10-12 23:52:53,280 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/15
[2025-10-12 19:53:44] 2025-10-12 23:52:53,304 | INFO     | sufficient remaining disk space (399355412480 B)
[2025-10-12 19:53:44] 2025-10-12 23:52:53,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:53:44] 2025-10-12 23:52:53,304 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:53:44] 2025-10-12 23:52:53,305 | INFO     | update_server=False
[2025-10-12 19:53:44] 2025-10-12 23:52:53,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:53:44] 2025-10-12 23:52:53,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:53:44] 2025-10-12 23:52:53,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:53:44] 2025-10-12 23:52:53,319 | INFO     | aborting loop
[2025-10-12 19:53:44] 2025-10-12 23:52:53,896 | INFO     | all data control threads have been joined
[2025-10-12 19:53:44] 2025-10-12 23:52:53,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:53:44] 2025-10-12 23:52:54,311 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:54,324 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:54,435 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:54,491 | INFO     | all payload control threads have been joined
[2025-10-12 19:53:44] 2025-10-12 23:52:54,501 | INFO     | all job control threads have been joined
[2025-10-12 19:53:44] 2025-10-12 23:52:54,809 | INFO     | [job] validate thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:54,901 | INFO     | [data] control thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:54,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,087 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,251 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,315 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,496 | INFO     | [payload] control thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,506 | INFO     | [job] control thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,713 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,741 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:55,935 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:56,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:53:44] 2025-10-12 23:52:57,218 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:52:57,312 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:53:44] 2025-10-12 23:53:23,412 | INFO     | PID=2179275 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:53:44] 2025-10-12 23:53:23,412 | INFO     | .. there are 14 such processes running
[2025-10-12 19:53:44] 2025-10-12 23:53:23,413 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:53:44] 2025-10-12 23:53:23,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:53:44] 2025-10-12 23:53:23,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:53:44] 2025-10-12 23:53:37,775 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:53:44] 2025-10-12 23:53:39,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124583595865920)>', '<ExcThread(monitor, started 124582832891648)>']
[2025-10-12 19:53:44] 2025-10-12 23:53:39,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:53:44] 2025-10-12 23:53:39,493 | INFO     | [monitor] control thread has ended
[2025-10-12 19:53:44] 2025-10-12 23:53:44,380 | INFO     | all workflow threads have been joined
[2025-10-12 19:53:44] 2025-10-12 23:53:44,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:53:44] 2025-10-12 23:53:44,381 | INFO     | traces error code: 0
[2025-10-12 19:53:44] 2025-10-12 23:53:44,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:53:44] 2025-10-12 23:53:44,505 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:53:44] 2025-10-12 23:53:44,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:53:44] 2025-10-12 23:53:44,509 [wrapper] pilotpid: 2179275
[2025-10-12 19:53:44] 2025-10-12 23:53:44,511 [wrapper] Pilot exit status: 0
[2025-10-12 19:53:44] 2025-10-12 23:53:44,519 [wrapper] pandaids: 6840223764
[2025-10-12 19:53:44] 2025-10-12 23:53:44,594 [wrapper] cleanup supervisor_pilot 2663666 2179276
[2025-10-12 19:53:44] 2025-10-12 23:53:44,598 [wrapper] Test setup, not cleaning
[2025-10-12 19:53:44] 2025-10-12 23:53:44,601 [wrapper] apfmon messages muted
[2025-10-12 19:53:44] 2025-10-12 23:53:44,603 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:53:44] 2025-10-12 23:53:44,606 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:53:44]  *** Error codes and diagnostics ***
[2025-10-12 19:53:44]     "exeErrorCode": 0,
[2025-10-12 19:53:44]     "exeErrorDiag": "",
[2025-10-12 19:53:44]     "pilotErrorCode": 0,
[2025-10-12 19:53:44]     "pilotErrorDiag": "",
[2025-10-12 19:53:44]  *** Listing of results directory ***
[2025-10-12 19:53:44] total 410076
[2025-10-12 19:53:44] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 19:53:44] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 11:14 runpilot2-wrapper.sh
[2025-10-12 19:53:44] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 11:14 queuedata.json
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:53:44] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 16:30 run_atlas
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 16:30 job.xml
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd 219370603 Oct 12 16:30 EVNT.46676267._004557.pool.root.1
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 16:30 start_atlas.sh
[2025-10-12 19:53:44] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 16:30 shared
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd    569676 Oct 12 16:30 input.tar.gz
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 16:30 init_data.xml
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 16:30 boinc_setup_complete
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 16:30 boinc_lockfile
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd      2549 Oct 12 16:30 pandaJob.out
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd    975536 Oct 12 16:30 agis_schedconf.cvmfs.json
[2025-10-12 19:53:44] drwx------ 5 whitlerd whitlerd      4096 Oct 12 16:30 pilot3
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd 192469742 Oct 12 19:52 HITS.46676269._081868.pool.root.1
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 19:52 boinc_task_state.xml
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd      1033 Oct 12 19:52 memory_monitor_summary.json
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 19:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd    365519 Oct 12 19:52 log.46676269._081868.job.log.tgz.1
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd        95 Oct 12 19:52 pilot_heartbeat.json
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd      7789 Oct 12 19:52 heartbeat.json
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 19:53 boinc_mmap_file
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 19:53 wrapper_checkpoint.txt
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd      4840 Oct 12 19:53 pilotlog.txt
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd   1716282 Oct 12 19:53 log.46676269._081868.job.log.1
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd       357 Oct 12 19:53 output.list
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 19:53 runtime_log
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd   2099200 Oct 12 19:53 result.tar.gz
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 19:53 runtime_log.err
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd       650 Oct 12 19:53 pyGNDmXxCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCEUMDmIkVhnm.diag
[2025-10-12 19:53:44] -rw-rw-r-- 1 whitlerd whitlerd     21254 Oct 12 19:53 stderr.txt
[2025-10-12 19:53:44] HITS file was successfully produced:
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd 192469742 Oct 12 19:52 shared/HITS.pool.root.1
[2025-10-12 19:53:44]  *** Contents of shared directory: ***
[2025-10-12 19:53:44] total 404828
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd 219370603 Oct 12 16:30 ATLAS.root_0
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 16:30 start_atlas.sh
[2025-10-12 19:53:44] -rw-r--r-- 2 whitlerd whitlerd    569676 Oct 12 16:30 input.tar.gz
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd 192469742 Oct 12 19:52 HITS.pool.root.1
[2025-10-12 19:53:44] -rw------- 1 whitlerd whitlerd   2099200 Oct 12 19:53 result.tar.gz
19:53:46 (2172090): run_atlas exited; CPU time 48023.437863
19:53:46 (2172090): called boinc_finish(0)

</stderr_txt>
]]>

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