Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:25:59 (3194616): wrapper (7.7.26015): starting
22:25:59 (3194616): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 22:25:59] Arguments: --nthreads 3
[2025-10-12 22:25:59] Threads: 3
[2025-10-12 22:25:59] Checking for CVMFS
[2025-10-12 22:25:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:25:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:25:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:25:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:25:59] 2.9.2.0 2750821 1446 81556 151636 2 56 5860359 36864001 0 130560 0 1164849 99.991 55691 849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 22:25:59] CVMFS is ok
[2025-10-12 22:25:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:25:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:25:59] Further information can be found at the LHC@home message board.
[2025-10-12 22:25:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:25:59] Checking for apptainer binary...
[2025-10-12 22:25:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:25:59] Running /usr/bin/apptainer --version
[2025-10-12 22:25:59] apptainer version 1.4.1-1.1
[2025-10-12 22:25:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:25:59] atlasA143
[2025-10-12 22:25:59] apptainer works
[2025-10-12 22:25:59] Set ATHENA_PROC_NUMBER=3
[2025-10-12 22:25:59] Set ATHENA_CORE_NUMBER=3
[2025-10-12 22:25:59] Starting ATLAS job with PandaID=6840537639
[2025-10-12 22:25:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:49:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:49:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840537639/log.46676269._086786.job.log.tgz.1
[2025-10-12 23:49:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/49/log.46676269._086786.job.log.tgz.1
[2025-10-12 23:49:26]  workdir=None
[2025-10-12 23:49:26] ]
[2025-10-12 23:49:26] 2025-10-12 21:48:49,067 | INFO     | transferring file log.46676269._086786.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840537639/log.46676269._086786.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 23:49:26] 2025-10-12 21:48:49,067 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840537639/log.46676269._086786.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0867
[2025-10-12 23:49:26] 2025-10-12 21:48:49,079 | INFO     | adding to output.list: log.46676269._086786.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/49/log.46676269._086786.job.log.tg
[2025-10-12 23:49:26] 2025-10-12 21:48:49,079 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:49:26] 2025-10-12 21:48:49,079 | INFO     | summary of transferred files:
[2025-10-12 23:49:26] 2025-10-12 21:48:49,079 | INFO     |  -- lfn=log.46676269._086786.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:49:26] 2025-10-12 21:48:49,079 | INFO     | stage-out finished correctly
[2025-10-12 23:49:26] 2025-10-12 21:48:49,108 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:49:26] 2025-10-12 21:48:49,529 | INFO     | job 6840537639 has state=finished
[2025-10-12 23:49:26] 2025-10-12 21:48:49,530 | INFO     | preparing for final server update for job 6840537639 in state='finished'
[2025-10-12 23:49:26] 2025-10-12 21:48:49,530 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:49:26] 2025-10-12 21:48:49,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:49:26] 2025-10-12 21:48:49,530 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:49:26] 2025-10-12 21:48:49,530 | INFO     | job 6840537639 has finished - writing final server update
[2025-10-12 23:49:26] 2025-10-12 21:48:49,531 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:49:26] 2025-10-12 21:48:49,531 | INFO     | executing command: lscpu
[2025-10-12 23:49:26] 2025-10-12 21:48:49,547 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:49:26] 2025-10-12 21:48:50,953 | INFO     | time since job start (4966s) is within the limit (172800.0s)
[2025-10-12 23:49:26] 2025-10-12 21:48:52,959 | INFO     | time since job start (4968s) is within the limit (172800.0s)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,388 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:49:26] 2025-10-12 21:48:53,390 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3706.811166666667
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537639/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | INFO     | extracted standard info from prmon json
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:49:26] 2025-10-12 21:48:53,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | sum of square deviations: 130793150.0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | sum of deviations: -12609743222.0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | mean x: 1760303346.0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | mean y: 2513831.2266666666
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | -- intersect: 169713031437.74826
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | intersect: 169713031437.74826
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | chi2: 0.03957007602817267
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | -- intersect: 169713031437.74826
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | current memory leak: -96.41 B/s (using 75 data points, chi2=0.04)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | could have reported an average CPU frequency of 3814 MHz (6 samples)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | ..............................
[2025-10-12 23:49:26] 2025-10-12 21:48:53,392 | INFO     | . Timing measurements:
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . get job = 0 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . initial setup = 1 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . payload setup = 2 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . stage-in = 0 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . payload execution = 4944 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . stage-out = 0 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | . log creation = 0 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,393 | INFO     | ..............................
[2025-10-12 23:49:26] 2025-10-12 21:48:53,422 | INFO     | 
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | job summary report
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | --------------------------------------------------
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | PanDA job id: 6840537639
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | task id: 46676269
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | errors: (none)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | pilot state: finished 
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | transexitcode: 0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | exeerrorcode: 0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | exeerrordiag: 
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | exitcode: 0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | exitmsg: OK
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | cpuconsumptiontime: 14290 s
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | nevents: 400
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | neventsw: 0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | pid: 3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | pgrp: 3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | corecount: 3
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | event service: False
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | sizes: {0: 2348860, 2: 2349122, 10: 2349150, 4950: 2375593, 4951: 2384653, 4955: 2384791}
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | --------------------------------------------------
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | 
[2025-10-12 23:49:26] 2025-10-12 21:48:53,423 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | job 6840537639 has completed (purged errors)
[2025-10-12 23:49:26] 2025-10-12 21:48:53,435 | INFO     | overall cleanup function is called
[2025-10-12 23:49:26] 2025-10-12 21:48:54,441 | INFO     | --- collectZombieJob: --- 10, [3204762]
[2025-10-12 23:49:26] 2025-10-12 21:48:54,442 | INFO     | zombie collector waiting for pid 3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:54,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:49:26] 2025-10-12 21:48:54,442 | INFO     | collected zombie processes
[2025-10-12 23:49:26] 2025-10-12 21:48:54,442 | INFO     | will attempt to kill all subprocesses of pid=3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:54,487 | INFO     | process IDs to be killed: [3204762] (in reverse order)
[2025-10-12 23:49:26] 2025-10-12 21:48:54,511 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:49:26] 2025-10-12 21:48:54,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:49:26] 2025-10-12 21:48:54,512 | INFO     | did not find any defunct processes belonging to 3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:54,513 | INFO     | did not find any defunct processes belonging to 3204762
[2025-10-12 23:49:26] 2025-10-12 21:48:54,513 | INFO     | ready for new job
[2025-10-12 23:49:26] 2025-10-12 21:48:54,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:49:26] 2025-10-12 21:48:54,514 | INFO     | ***************************************
[2025-10-12 23:49:26] 2025-10-12 21:48:54,514 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:49:26] 2025-10-12 21:48:54,514 | INFO     | ***************************************
[2025-10-12 23:49:26] 2025-10-12 21:48:54,514 | INFO     | 
[2025-10-12 23:49:26] 2025-10-12 21:48:54,515 | INFO     | architecture information:
[2025-10-12 23:49:26] 2025-10-12 21:48:54,515 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:49:26] 2025-10-12 21:48:54,523 | INFO     | cat /etc/os-release:
[2025-10-12 23:49:26] NAME="CentOS Linux"
[2025-10-12 23:49:26] VERSION="7 (Core)"
[2025-10-12 23:49:26] ID="centos"
[2025-10-12 23:49:26] ID_LIKE="rhel fedora"
[2025-10-12 23:49:26] VERSION_ID="7"
[2025-10-12 23:49:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:49:26] ANSI_COLOR="0;31"
[2025-10-12 23:49:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:49:26] HOME_URL="https://www.centos.org/"
[2025-10-12 23:49:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:49:26] 
[2025-10-12 23:49:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:49:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:49:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:49:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:49:26] 
[2025-10-12 23:49:26] 2025-10-12 21:48:54,524 | INFO     | ***************************************
[2025-10-12 23:49:26] 2025-10-12 21:48:55,026 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 23:49:26] 2025-10-12 21:48:55,039 | INFO     | sufficient remaining disk space (255800115200 B)
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | INFO     | update_server=False
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:49:26] 2025-10-12 21:48:55,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:49:26] 2025-10-12 21:48:55,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:49:26] 2025-10-12 21:48:55,201 | INFO     | all data control threads have been joined
[2025-10-12 23:49:26] 2025-10-12 21:48:55,388 | WARNING  | process 3204762 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6840537639/payload.stdout) since it has not been created yet
[2025-10-12 23:49:26] 2025-10-12 21:48:55,419 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 23:49:26] 2025-10-12 21:48:55,429 | INFO     | sufficient remaining disk space (255800115200 B)
[2025-10-12 23:49:26] 2025-10-12 21:48:55,430 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-12 23:49:26] 2025-10-12 21:48:55,430 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6840537639/HITS.46676269._086786.pool.root.1 since it does not exist
[2025-10-12 23:49:26] 2025-10-12 21:48:55,471 | INFO     | number of running child processes to parent process 3204762: 1
[2025-10-12 23:49:26] 2025-10-12 21:48:55,471 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:49:26] 2025-10-12 21:48:55,471 | INFO     | aborting job monitoring since job object (job id=6840537639) has expired
[2025-10-12 23:49:26] 2025-10-12 21:48:55,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:49:26] 2025-10-12 21:48:55,472 | INFO     | will abort loop
[2025-10-12 23:49:26] 2025-10-12 21:48:56,045 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,046 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,207 | INFO     | [data] control thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,209 | INFO     | all job control threads have been joined
[2025-10-12 23:49:26] 2025-10-12 21:48:56,214 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,242 | INFO     | all payload control threads have been joined
[2025-10-12 23:49:26] 2025-10-12 21:48:56,477 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,572 | INFO     | [job] validate thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,631 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,654 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:56,687 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:57,046 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:57,215 | INFO     | [job] control thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:57,248 | INFO     | [payload] control thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:57,287 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:57,498 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:48:59,148 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:49:05,370 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:49:26] 2025-10-12 21:49:06,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:49:26] 2025-10-12 21:49:09,749 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:49:26] 2025-10-12 21:49:11,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662674937664)>', '<ExcThread(monitor, started 139661582259968)>']
[2025-10-12 23:49:26] 2025-10-12 21:49:16,643 | INFO     | all workflow threads have been joined
[2025-10-12 23:49:26] 2025-10-12 21:49:16,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:49:26] 2025-10-12 21:49:16,644 | INFO     | traces error code: 0
[2025-10-12 23:49:26] 2025-10-12 21:49:16,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:49:26] 2025-10-12 21:49:26,077 | INFO     | PID=3198330 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:49:26] 2025-10-12 21:49:26,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:49:26] 2025-10-12 21:49:26,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:49:26] 2025-10-12 21:49:26,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:49:26] 2025-10-12 21:49:26,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:49:26] 2025-10-12 21:49:26,078 | INFO     | [monitor] control thread has ended
[2025-10-12 23:49:26] 2025-10-12 21:49:26,124 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:49:26] 2025-10-12 21:49:26,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:49:26] 2025-10-12 21:49:26,129 [wrapper] pilotpid: 3198330
[2025-10-12 23:49:26] 2025-10-12 21:49:26,131 [wrapper] Pilot exit status: 0
[2025-10-12 23:49:26] 2025-10-12 21:49:26,138 [wrapper] pandaids: 6840537639
[2025-10-12 23:49:26] 2025-10-12 21:49:26,154 [wrapper] cleanup supervisor_pilot 3216810 3198331
[2025-10-12 23:49:26] 2025-10-12 21:49:26,157 [wrapper] Test setup, not cleaning
[2025-10-12 23:49:26] 2025-10-12 21:49:26,159 [wrapper] apfmon messages muted
[2025-10-12 23:49:26] 2025-10-12 21:49:26,161 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:49:26] 2025-10-12 21:49:26,164 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:49:26]  *** Error codes and diagnostics ***
[2025-10-12 23:49:26]     "exeErrorCode": 0,
[2025-10-12 23:49:26]     "exeErrorDiag": "",
[2025-10-12 23:49:26]     "pilotErrorCode": 0,
[2025-10-12 23:49:26]     "pilotErrorDiag": "",
[2025-10-12 23:49:26]  *** Listing of results directory ***
[2025-10-12 23:49:26] total 413084
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:56 queuedata.json
[2025-10-12 23:49:26] -rwx------ 1 boinc boinc     36292 Oct 12 20:57 runpilot2-wrapper.sh
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:49:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:25 run_atlas
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:25 job.xml
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc 221605358 Oct 12 22:25 EVNT.46676267._004431.pool.root.1
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc    569682 Oct 12 22:25 input.tar.gz
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:25 start_atlas.sh
[2025-10-12 23:49:26] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:25 shared
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:25 boinc_setup_complete
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc      6517 Oct 12 22:25 init_data.xml
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:25 boinc_lockfile
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:25 pandaJob.out
[2025-10-12 23:49:26] -rw------- 1 boinc boinc    975536 Oct 12 22:26 agis_schedconf.cvmfs.json
[2025-10-12 23:49:26] -rw------- 1 boinc boinc   1560580 Oct 12 22:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:49:26] drwx------ 5 boinc boinc      4096 Oct 12 22:26 pilot3
[2025-10-12 23:49:26] -rw------- 1 boinc boinc        95 Oct 12 23:48 pilot_heartbeat.json
[2025-10-12 23:49:26] -rw------- 1 boinc boinc 195525482 Oct 12 23:48 HITS.46676269._086786.pool.root.1
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc       529 Oct 12 23:48 boinc_task_state.xml
[2025-10-12 23:49:26] -rw------- 1 boinc boinc      1018 Oct 12 23:48 memory_monitor_summary.json
[2025-10-12 23:49:26] -rw------- 1 boinc boinc    250488 Oct 12 23:48 log.46676269._086786.job.log.tgz.1
[2025-10-12 23:49:26] -rw------- 1 boinc boinc      7768 Oct 12 23:48 heartbeat.json
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:49 boinc_mmap_file
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:49 wrapper_checkpoint.txt
[2025-10-12 23:49:26] -rw------- 1 boinc boinc       747 Oct 12 23:49 pilotlog.txt
[2025-10-12 23:49:26] -rw------- 1 boinc boinc    729838 Oct 12 23:49 log.46676269._086786.job.log.1
[2025-10-12 23:49:26] -rw------- 1 boinc boinc       357 Oct 12 23:49 output.list
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:49 runtime_log
[2025-10-12 23:49:26] -rw------- 1 boinc boinc   1003520 Oct 12 23:49 result.tar.gz
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc      8792 Oct 12 23:49 runtime_log.err
[2025-10-12 23:49:26] -rw------- 1 boinc boinc       661 Oct 12 23:49 YuSKDmQRGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtBlNDm8sxpIn.diag
[2025-10-12 23:49:26] -rw-r--r-- 1 boinc boinc     22399 Oct 12 23:49 stderr.txt
[2025-10-12 23:49:26] HITS file was successfully produced:
[2025-10-12 23:49:26] -rw------- 1 boinc boinc 195525482 Oct 12 23:48 shared/HITS.pool.root.1
[2025-10-12 23:49:26]  *** Contents of shared directory: ***
[2025-10-12 23:49:26] total 408920
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc 221605358 Oct 12 22:25 ATLAS.root_0
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc    569682 Oct 12 22:25 input.tar.gz
[2025-10-12 23:49:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:25 start_atlas.sh
[2025-10-12 23:49:26] -rw------- 1 boinc boinc 195525482 Oct 12 23:48 HITS.pool.root.1
[2025-10-12 23:49:26] -rw------- 1 boinc boinc   1003520 Oct 12 23:49 result.tar.gz
23:49:27 (3194616): run_atlas exited; CPU time 14307.163445
23:49:27 (3194616): called boinc_finish(0)

</stderr_txt>
]]>

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