Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:09:58 (27733): wrapper (7.7.26015): starting
07:09:58 (27733): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:09:58] Arguments: --nthreads 8
[2025-10-13 07:09:58] Threads: 8
[2025-10-13 07:09:58] Checking for CVMFS
[2025-10-13 07:09:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:09:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:09:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:10:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:10:00] 2.11.2.0 32214 108377 110996 151649 3 60 13750702 25165825 4632 130560 0 39030010 99.911 16756332 2827 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 07:10:00] CVMFS is ok
[2025-10-13 07:10:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:10:00] Checking for apptainer binary...
[2025-10-13 07:10:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:10:00] Running /usr/bin/apptainer --version
[2025-10-13 07:10:00] apptainer version 1.3.2-1.el7
[2025-10-13 07:10:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:10:06] cg-vwn450.simple-grid.lan
[2025-10-13 07:10:06] apptainer works
[2025-10-13 07:10:06] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:10:06] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:10:06] Starting ATLAS job with PandaID=6840224711
[2025-10-13 07:10:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:32:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:32:25] 2025-10-13 09:31:43,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:32:25] 2025-10-13 09:31:43,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:32:25] 2025-10-13 09:31:43,193 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:32:25] 2025-10-13 09:31:43,193 | INFO     | sum of square deviations: 4560048290.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,195 | INFO     | sum of deviations: -1150492878.9999733
[2025-10-13 11:32:25] 2025-10-13 09:31:43,196 | INFO     | mean x: 1760340333.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,196 | INFO     | mean y: 2511680.8530612243
[2025-10-13 11:32:25] 2025-10-13 09:31:43,196 | INFO     | -- intersect: 446642727.0470789
[2025-10-13 11:32:25] 2025-10-13 09:31:43,196 | INFO     | intersect: 446642727.0470789
[2025-10-13 11:32:25] 2025-10-13 09:31:43,196 | INFO     | chi2: 5.467812690122967
[2025-10-13 11:32:25] 2025-10-13 09:31:43,197 | INFO     | sum of square deviations: 4286517580.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,199 | INFO     | sum of deviations: 15814669771.500046
[2025-10-13 11:32:25] 2025-10-13 09:31:43,199 | INFO     | mean x: 1760340180.5
[2025-10-13 11:32:25] 2025-10-13 09:31:43,199 | INFO     | mean y: 2520989.8375
[2025-10-13 11:32:25] 2025-10-13 09:31:43,199 | INFO     | -- intersect: -6492074709.478467
[2025-10-13 11:32:25] 2025-10-13 09:31:43,199 | INFO     | intersect: -6492074709.478467
[2025-10-13 11:32:25] 2025-10-13 09:31:43,200 | INFO     | chi2: 4.7376092657052515
[2025-10-13 11:32:25] 2025-10-13 09:31:43,200 | INFO     | current chi2=4.7376092657052515 (change=13.35458008166139 %)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,200 | INFO     | right removable region: 239
[2025-10-13 11:32:25] 2025-10-13 09:31:43,200 | INFO     | sum of square deviations: 4286517580.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,202 | INFO     | sum of deviations: -80993395654.5
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | mean x: 1760340485.5
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | mean y: 2556119.595833333
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | -- intersect: 33264044208.193882
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | intersect: 33264044208.193882
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | chi2: 1.4311343313472817
[2025-10-13 11:32:25] 2025-10-13 09:31:43,203 | INFO     | current chi2=1.4311343313472817 (change=73.8262004853883 %)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,204 | INFO     | sum of square deviations: 4024149870.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,206 | INFO     | sum of deviations: -99287386269.99995
[2025-10-13 11:32:25] 2025-10-13 09:31:43,206 | INFO     | mean x: 1760340638.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,206 | INFO     | mean y: 2566660.770212766
[2025-10-13 11:32:25] 2025-10-13 09:31:43,206 | INFO     | -- intersect: 43435248478.8269
[2025-10-13 11:32:25] 2025-10-13 09:31:43,206 | INFO     | intersect: 43435248478.8269
[2025-10-13 11:32:25] 2025-10-13 09:31:43,207 | INFO     | chi2: 1.032545668516263
[2025-10-13 11:32:25] 2025-10-13 09:31:43,207 | INFO     | current chi2=1.032545668516263 (change=27.851240383268845 %)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,207 | INFO     | sum of square deviations: 3772712597.5
[2025-10-13 11:32:25] 2025-10-13 09:31:43,216 | INFO     | sum of deviations: -96443463271.49998
[2025-10-13 11:32:25] 2025-10-13 09:31:43,216 | INFO     | mean x: 1760340790.5
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | mean y: 2564911.8391304347
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | -- intersect: 45002908295.11484
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | intersect: 45002908295.11484
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | chi2: 1.0200982830655778
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | current chi2=1.0200982830655778 (change=1.2055045922154477 %)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,217 | INFO     | left removable region: 30
[2025-10-13 11:32:25] 2025-10-13 09:31:43,218 | INFO     | sum of square deviations: 2830787960.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,219 | INFO     | sum of deviations: -59946084395.00001
[2025-10-13 11:32:25] 2025-10-13 09:31:43,219 | INFO     | mean x: 1760341065.0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,219 | INFO     | mean y: 2563529.947368421
[2025-10-13 11:32:25] 2025-10-13 09:31:43,220 | INFO     | -- intersect: 37280365872.47047
[2025-10-13 11:32:25] 2025-10-13 09:31:43,220 | INFO     | intersect: 37280365872.47047
[2025-10-13 11:32:25] 2025-10-13 09:31:43,220 | INFO     | chi2: 0.22245530750488965
[2025-10-13 11:32:25] 2025-10-13 09:31:43,220 | INFO     | -- intersect: 37280365872.47047
[2025-10-13 11:32:25] 2025-10-13 09:31:43,220 | INFO     | current memory leak: -21.18 B/s (using 209 data points, chi2=0.22)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | ..............................
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | . Timing measurements:
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | . get job = 0 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | . initial setup = 6 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,221 | INFO     | . payload setup = 125 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,222 | INFO     | . stage-in = 0 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,222 | INFO     | . payload execution = 15048 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,222 | INFO     | . stage-out = 5 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,222 | INFO     | . log creation = 1 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,222 | INFO     | ..............................
[2025-10-13 11:32:25] 2025-10-13 09:31:43,406 | INFO     | 
[2025-10-13 11:32:25] 2025-10-13 09:31:43,406 | INFO     | job summary report
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | --------------------------------------------------
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | PanDA job id: 6840224711
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | task id: 46676269
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | errors: (none)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | pilot state: finished 
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | transexitcode: 0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | exeerrorcode: 0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | exeerrordiag: 
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | exitcode: 0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | exitmsg: OK
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | cpuconsumptiontime: 56342 s
[2025-10-13 11:32:25] 2025-10-13 09:31:43,407 | INFO     | nevents: 400
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | neventsw: 0
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | pid: 5723
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | pgrp: 5723
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | corecount: 8
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | event service: False
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 44: 2348998, 55: 2349154, 66: 2349182, 76: 2349210, 87: 2349266, 94: 2349556, 98: 2349864, 1
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | --------------------------------------------------
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | 
[2025-10-13 11:32:25] 2025-10-13 09:31:43,408 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-10-13 11:32:25] 2025-10-13 09:31:43,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:32:25] 2025-10-13 09:31:43,970 | INFO     | job 6840224711 has completed (purged errors)
[2025-10-13 11:32:25] 2025-10-13 09:31:43,970 | INFO     | overall cleanup function is called
[2025-10-13 11:32:25] 2025-10-13 09:31:44,980 | INFO     | --- collectZombieJob: --- 10, [5723]
[2025-10-13 11:32:25] 2025-10-13 09:31:44,980 | INFO     | zombie collector waiting for pid 5723
[2025-10-13 11:32:25] 2025-10-13 09:31:44,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:32:25] 2025-10-13 09:31:44,980 | INFO     | collected zombie processes
[2025-10-13 11:32:25] 2025-10-13 09:31:44,980 | INFO     | will attempt to kill all subprocesses of pid=5723
[2025-10-13 11:32:25] 2025-10-13 09:31:45,155 | INFO     | process IDs to be killed: [5723] (in reverse order)
[2025-10-13 11:32:25] 2025-10-13 09:31:45,970 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:32:25] 2025-10-13 09:31:45,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:32:25] 2025-10-13 09:31:45,974 | INFO     | did not find any defunct processes belonging to 5723
[2025-10-13 11:32:25] 2025-10-13 09:31:45,977 | INFO     | did not find any defunct processes belonging to 5723
[2025-10-13 11:32:25] 2025-10-13 09:31:45,978 | INFO     | ready for new job
[2025-10-13 11:32:25] 2025-10-13 09:31:45,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:32:25] 2025-10-13 09:31:45,980 | INFO     | ***************************************
[2025-10-13 11:32:25] 2025-10-13 09:31:45,980 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:32:25] 2025-10-13 09:31:45,981 | INFO     | ***************************************
[2025-10-13 11:32:25] 2025-10-13 09:31:45,981 | INFO     | 
[2025-10-13 11:32:25] 2025-10-13 09:31:45,981 | INFO     | pilot is running in a VM
[2025-10-13 11:32:25] 2025-10-13 09:31:45,981 | INFO     | architecture information:
[2025-10-13 11:32:25] 2025-10-13 09:31:45,998 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:32:25] 2025-10-13 09:31:46,199 | INFO     | cat /etc/os-release:
[2025-10-13 11:32:25] NAME="CentOS Linux"
[2025-10-13 11:32:25] VERSION="7 (Core)"
[2025-10-13 11:32:25] ID="centos"
[2025-10-13 11:32:25] ID_LIKE="rhel fedora"
[2025-10-13 11:32:25] VERSION_ID="7"
[2025-10-13 11:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:32:25] ANSI_COLOR="0;31"
[2025-10-13 11:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:32:25] HOME_URL="https://www.centos.org/"
[2025-10-13 11:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:32:25] 
[2025-10-13 11:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:32:25] 
[2025-10-13 11:32:25] 2025-10-13 09:31:46,199 | INFO     | ***************************************
[2025-10-13 11:32:25] 2025-10-13 09:31:46,703 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-10-13 11:32:25] 2025-10-13 09:31:46,921 | INFO     | sufficient remaining disk space (495592669184 B)
[2025-10-13 11:32:25] 2025-10-13 09:31:46,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:32:25] 2025-10-13 09:31:46,922 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:32:25] 2025-10-13 09:31:46,922 | INFO     | update_server=False
[2025-10-13 11:32:25] 2025-10-13 09:31:46,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:32:25] 2025-10-13 09:31:46,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:32:25] 2025-10-13 09:31:46,923 | INFO     | aborting loop
[2025-10-13 11:32:25] 2025-10-13 09:31:47,322 | INFO     | all payload control threads have been joined
[2025-10-13 11:32:25] 2025-10-13 09:31:47,495 | INFO     | all data control threads have been joined
[2025-10-13 11:32:25] 2025-10-13 09:31:47,673 | INFO     | all job control threads have been joined
[2025-10-13 11:32:25] 2025-10-13 09:31:47,928 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:47,929 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:47,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:32:25] 2025-10-13 09:31:48,258 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,328 | INFO     | [payload] control thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,410 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,419 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:32:25] 2025-10-13 09:31:48,475 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,501 | INFO     | [data] control thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,592 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:48,679 | INFO     | [job] control thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,074 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,248 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,372 | INFO     | [job] validate thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,425 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,955 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:31:49,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:32:25] 2025-10-13 09:31:53,998 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:32:25] 2025-10-13 09:32:14,491 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:32:25] 2025-10-13 09:32:15,171 | INFO     | PID=31528 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:32:25] 2025-10-13 09:32:15,171 | INFO     | .. there are 9 such processes running
[2025-10-13 11:32:25] 2025-10-13 09:32:15,172 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:32:25] 2025-10-13 09:32:15,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:32:25] 2025-10-13 09:32:15,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:32:25] 2025-10-13 09:32:15,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864083208000)>', '<ExcThread(monitor, started 139863613478656)>']
[2025-10-13 11:32:25] 2025-10-13 09:32:16,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:32:25] 2025-10-13 09:32:16,178 | INFO     | [monitor] control thread has ended
[2025-10-13 11:32:25] 2025-10-13 09:32:20,806 | INFO     | all workflow threads have been joined
[2025-10-13 11:32:25] 2025-10-13 09:32:20,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:32:25] 2025-10-13 09:32:20,806 | INFO     | traces error code: 0
[2025-10-13 11:32:25] 2025-10-13 09:32:20,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:32:25] 2025-10-13 09:32:21,130 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:32:25] 2025-10-13 09:32:21,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:32:25] 2025-10-13 09:32:21,311 [wrapper] pilotpid: 31528
[2025-10-13 11:32:25] 2025-10-13 09:32:21,403 [wrapper] Pilot exit status: 0
[2025-10-13 11:32:25] 2025-10-13 09:32:21,882 [wrapper] pandaids: 6840224711
[2025-10-13 11:32:25] 2025-10-13 09:32:22,428 [wrapper] cleanup supervisor_pilot 15104 31529
[2025-10-13 11:32:25] 2025-10-13 09:32:22,525 [wrapper] Test setup, not cleaning
[2025-10-13 11:32:25] 2025-10-13 09:32:22,624 [wrapper] apfmon messages muted
[2025-10-13 11:32:25] 2025-10-13 09:32:22,686 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:32:25] 2025-10-13 09:32:22,786 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:32:25]  *** Error codes and diagnostics ***
[2025-10-13 11:32:25]     "exeErrorCode": 0,
[2025-10-13 11:32:25]     "exeErrorDiag": "",
[2025-10-13 11:32:25]     "pilotErrorCode": 0,
[2025-10-13 11:32:25]     "pilotErrorDiag": "",
[2025-10-13 11:32:25]  *** Listing of results directory ***
[2025-10-13 11:32:25] total 410852
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 11:32:25] -rwx------. 1 boinc boinc     36292 Oct 12 17:14 runpilot2-wrapper.sh
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc      5112 Oct 12 17:14 queuedata.json
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc       100 Oct 13 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:32:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 07:09 run_atlas
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc       105 Oct 13 07:09 job.xml
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc 219929947 Oct 13 07:09 EVNT.46676267._004562.pool.root.1
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:09 start_atlas.sh
[2025-10-13 11:32:25] drwxrwx--x. 2 boinc boinc        68 Oct 13 07:09 shared
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc    569685 Oct 13 07:09 input.tar.gz
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc      6391 Oct 13 07:09 init_data.xml
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc         0 Oct 13 07:09 boinc_lockfile
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc      2550 Oct 13 07:10 pandaJob.out
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc    973230 Oct 13 07:13 agis_schedconf.cvmfs.json
[2025-10-13 11:32:25] drwx------. 5 boinc boinc      4096 Oct 13 07:13 pilot3
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc 191812420 Oct 13 11:28 HITS.46676269._082006.pool.root.1
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc       531 Oct 13 11:28 boinc_task_state.xml
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc      1017 Oct 13 11:29 memory_monitor_summary.json
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc   1560580 Oct 13 11:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc    477406 Oct 13 11:30 log.46676269._082006.job.log.tgz.1
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc      7788 Oct 13 11:31 heartbeat.json
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc      8192 Oct 13 11:32 boinc_mmap_file
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc        28 Oct 13 11:32 wrapper_checkpoint.txt
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc        95 Oct 13 11:32 pilot_heartbeat.json
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc      4885 Oct 13 11:32 pilotlog.txt
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc   2067449 Oct 13 11:32 log.46676269._082006.job.log.1
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc       357 Oct 13 11:32 output.list
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc       620 Oct 13 11:32 runtime_log
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc   2560000 Oct 13 11:32 result.tar.gz
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc      8717 Oct 13 11:32 runtime_log.err
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc       657 Oct 13 11:32 h25NDmXxCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkEUMDmrm4mMn.diag
[2025-10-13 11:32:25] -rw-r--r--. 1 boinc boinc     20598 Oct 13 11:32 stderr.txt
[2025-10-13 11:32:25] HITS file was successfully produced:
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc 191812420 Oct 13 11:28 shared/HITS.pool.root.1
[2025-10-13 11:32:25]  *** Contents of shared directory: ***
[2025-10-13 11:32:25] total 405172
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc 219929947 Oct 13 07:09 ATLAS.root_0
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc     15120 Oct 13 07:09 start_atlas.sh
[2025-10-13 11:32:25] -rw-r--r--. 2 boinc boinc    569685 Oct 13 07:09 input.tar.gz
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc 191812420 Oct 13 11:28 HITS.pool.root.1
[2025-10-13 11:32:25] -rw-------. 1 boinc boinc   2560000 Oct 13 11:32 result.tar.gz
11:32:27 (27733): run_atlas exited; CPU time 56560.939336
11:32:27 (27733): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN