Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:13:57 (4074401): wrapper (7.7.26015): starting
08:13:57 (4074401): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:13:57] Arguments: --nthreads 3
[2025-10-13 08:13:57] Threads: 3
[2025-10-13 08:13:57] Checking for CVMFS
[2025-10-13 08:13:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:13:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:13:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:13:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:13:57] 2.9.2.0 2416552 5430 85092 151650 3 57 26781806 36864001 0 130560 0 4397583 99.991 186853 908 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 08:13:57] CVMFS is ok
[2025-10-13 08:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:13:57] Further information can be found at the LHC@home message board.
[2025-10-13 08:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:13:57] Checking for apptainer binary...
[2025-10-13 08:13:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:13:57] Running /usr/bin/apptainer --version
[2025-10-13 08:13:57] apptainer version 1.4.1-1.1
[2025-10-13 08:13:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:13:57] cosA125a
[2025-10-13 08:13:57] apptainer works
[2025-10-13 08:13:57] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:13:57] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:13:57] Starting ATLAS job with PandaID=6840537610
[2025-10-13 08:13:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:38:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:38:14]  status=None
[2025-10-13 09:38:14]  status_code=0
[2025-10-13 09:38:14]  storage_token=
[2025-10-13 09:38:14]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840537610/log.46676269._086757.job.log.tgz.1
[2025-10-13 09:38:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/d9/log.46676269._086757.job.log.tgz.1
[2025-10-13 09:38:14]  workdir=None
[2025-10-13 09:38:14] ]
[2025-10-13 09:38:14] 2025-10-13 07:37:30,143 | INFO     | transferring file log.46676269._086757.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840537610/log.46676269._086757.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 09:38:14] 2025-10-13 07:37:30,143 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840537610/log.46676269._086757.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0867
[2025-10-13 09:38:14] 2025-10-13 07:37:30,156 | INFO     | adding to output.list: log.46676269._086757.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/d9/log.46676269._086757.job.log.tg
[2025-10-13 09:38:14] 2025-10-13 07:37:30,157 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 09:38:14] 2025-10-13 07:37:30,157 | INFO     | summary of transferred files:
[2025-10-13 09:38:14] 2025-10-13 07:37:30,157 | INFO     |  -- lfn=log.46676269._086757.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 09:38:14] 2025-10-13 07:37:30,157 | INFO     | stage-out finished correctly
[2025-10-13 09:38:14] 2025-10-13 07:37:30,547 | INFO     | time since job start (5007s) is within the limit (172800.0s)
[2025-10-13 09:38:14] 2025-10-13 07:37:31,199 | WARNING  | process 4084553 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 09:38:14] 2025-10-13 07:37:31,199 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537610/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:38:14] 2025-10-13 07:37:31,234 | INFO     | number of running child processes to parent process 4084553: 1
[2025-10-13 09:38:14] 2025-10-13 07:37:31,234 | INFO     | maximum number of monitored processes: 6
[2025-10-13 09:38:14] 2025-10-13 07:37:32,553 | INFO     | time since job start (5009s) is within the limit (172800.0s)
[2025-10-13 09:38:14] 2025-10-13 07:37:32,702 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 09:38:14] 2025-10-13 07:37:32,733 | INFO     | job 6840537610 has state=finished
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | preparing for final server update for job 6840537610 in state='finished'
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | this job has now completed (state=finished)
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | log transfer has been attempted: DONE
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | job 6840537610 has finished - writing final server update
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | total number of processed events: 400 (read)
[2025-10-13 09:38:14] 2025-10-13 07:37:32,734 | INFO     | executing command: lscpu
[2025-10-13 09:38:14] 2025-10-13 07:37:32,747 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 09:38:14] 2025-10-13 07:37:33,737 | INFO     | monitor loop #385: job 0:6840537610 is in state 'finished'
[2025-10-13 09:38:14] 2025-10-13 07:37:33,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:38:14] 2025-10-13 07:37:34,559 | INFO     | time since job start (5011s) is within the limit (172800.0s)
[2025-10-13 09:38:14] 2025-10-13 07:37:36,239 | INFO     | monitor loop #386: job 0:6840537610 is in state 'finished'
[2025-10-13 09:38:14] 2025-10-13 07:37:36,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:38:14] 2025-10-13 07:37:36,564 | INFO     | time since job start (5013s) is within the limit (172800.0s)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 09:38:14] 2025-10-13 07:37:37,195 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3444.804
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840537610/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | INFO     | extracted standard info from prmon json
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:38:14] 2025-10-13 07:37:37,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | sum of square deviations: 130793150.0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | sum of deviations: -8251733092.999998
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | mean x: 1760338625.0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | mean y: 2420875.12
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | -- intersect: 111062094006.30931
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | intersect: 111062094006.30931
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | chi2: 0.10651199433193843
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | -- intersect: 111062094006.30931
[2025-10-13 09:38:14] 2025-10-13 07:37:37,197 | INFO     | current memory leak: -63.09 B/s (using 75 data points, chi2=0.11)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | could have reported an average CPU frequency of 3841 MHz (6 samples)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | ..............................
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . Timing measurements:
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . get job = 0 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . initial setup = 1 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . payload setup = 2 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . stage-in = 0 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . payload execution = 4986 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . stage-out = 0 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | . log creation = 0 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,198 | INFO     | ..............................
[2025-10-13 09:38:14] 2025-10-13 07:37:37,708 | INFO     | 
[2025-10-13 09:38:14] 2025-10-13 07:37:37,708 | INFO     | job summary report
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | --------------------------------------------------
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | PanDA job id: 6840537610
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | task id: 46676269
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | errors: (none)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | pilot state: finished 
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | transexitcode: 0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | exeerrorcode: 0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | exeerrordiag: 
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | exitcode: 0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | exitmsg: OK
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | cpuconsumptiontime: 14329 s
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | nevents: 400
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | neventsw: 0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,709 | INFO     | pid: 4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | pgrp: 4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | corecount: 3
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | event service: False
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | sizes: {0: 2348689, 1: 2348888, 3: 2349150, 11: 2349178, 4992: 2375648, 4994: 2384652, 4997: 2384836, 5001: 2385030}
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | --------------------------------------------------
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | 
[2025-10-13 09:38:14] 2025-10-13 07:37:37,710 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | job 6840537610 has completed (purged errors)
[2025-10-13 09:38:14] 2025-10-13 07:37:37,726 | INFO     | overall cleanup function is called
[2025-10-13 09:38:14] 2025-10-13 07:37:38,732 | INFO     | --- collectZombieJob: --- 10, [4084553]
[2025-10-13 09:38:14] 2025-10-13 07:37:38,733 | INFO     | zombie collector waiting for pid 4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:38,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:38:14] 2025-10-13 07:37:38,733 | INFO     | collected zombie processes
[2025-10-13 09:38:14] 2025-10-13 07:37:38,733 | INFO     | will attempt to kill all subprocesses of pid=4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:38,774 | INFO     | process IDs to be killed: [4084553] (in reverse order)
[2025-10-13 09:38:14] 2025-10-13 07:37:38,798 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:38:14] 2025-10-13 07:37:38,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:38:14] 2025-10-13 07:37:38,800 | INFO     | did not find any defunct processes belonging to 4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:38,801 | INFO     | did not find any defunct processes belonging to 4084553
[2025-10-13 09:38:14] 2025-10-13 07:37:38,801 | INFO     | ready for new job
[2025-10-13 09:38:14] 2025-10-13 07:37:38,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | ***************************************
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | ***************************************
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | 
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | architecture information:
[2025-10-13 09:38:14] 2025-10-13 07:37:38,802 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:38:14] 2025-10-13 07:37:38,810 | INFO     | cat /etc/os-release:
[2025-10-13 09:38:14] NAME="CentOS Linux"
[2025-10-13 09:38:14] VERSION="7 (Core)"
[2025-10-13 09:38:14] ID="centos"
[2025-10-13 09:38:14] ID_LIKE="rhel fedora"
[2025-10-13 09:38:14] VERSION_ID="7"
[2025-10-13 09:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:38:14] ANSI_COLOR="0;31"
[2025-10-13 09:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:38:14] HOME_URL="https://www.centos.org/"
[2025-10-13 09:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:38:14] 
[2025-10-13 09:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:38:14] 
[2025-10-13 09:38:14] 2025-10-13 07:37:38,811 | INFO     | ***************************************
[2025-10-13 09:38:14] 2025-10-13 07:37:39,314 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | INFO     | sufficient remaining disk space (333092749312 B)
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | INFO     | update_server=False
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:38:14] 2025-10-13 07:37:39,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:38:14] 2025-10-13 07:37:39,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:38:14] 2025-10-13 07:37:39,748 | INFO     | aborting loop
[2025-10-13 09:38:14] 2025-10-13 07:37:39,849 | INFO     | all payload control threads have been joined
[2025-10-13 09:38:14] 2025-10-13 07:37:40,144 | INFO     | all data control threads have been joined
[2025-10-13 09:38:14] 2025-10-13 07:37:40,330 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:40,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:38:14] 2025-10-13 07:37:40,753 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:40,813 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:40,841 | INFO     | all job control threads have been joined
[2025-10-13 09:38:14] 2025-10-13 07:37:40,855 | INFO     | [payload] control thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,149 | INFO     | [data] control thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,233 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,581 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,705 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,735 | INFO     | [job] validate thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,821 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,828 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:41,847 | INFO     | [job] control thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:42,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:38:14] 2025-10-13 07:37:42,709 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:43,246 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:43,334 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:37:49,905 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:38:14] 2025-10-13 07:37:50,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:38:14] 2025-10-13 07:38:08,812 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:38:14] 2025-10-13 07:38:08,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357901514560)>', '<ExcThread(monitor, started 140357551503104)>']
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | INFO     | PID=4078122 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:38:14] 2025-10-13 07:38:09,682 | INFO     | [monitor] control thread has ended
[2025-10-13 09:38:14] 2025-10-13 07:38:13,912 | INFO     | all workflow threads have been joined
[2025-10-13 09:38:14] 2025-10-13 07:38:13,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:38:14] 2025-10-13 07:38:13,914 | INFO     | traces error code: 0
[2025-10-13 09:38:14] 2025-10-13 07:38:13,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:38:14] 2025-10-13 07:38:13,965 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:38:14] 2025-10-13 07:38:13,967 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:38:14] 2025-10-13 07:38:13,969 [wrapper] pilotpid: 4078122
[2025-10-13 09:38:14] 2025-10-13 07:38:13,972 [wrapper] Pilot exit status: 0
[2025-10-13 09:38:14] 2025-10-13 07:38:13,978 [wrapper] pandaids: 6840537610
[2025-10-13 09:38:14] 2025-10-13 07:38:13,994 [wrapper] cleanup supervisor_pilot 4096449 4078123
[2025-10-13 09:38:14] 2025-10-13 07:38:13,996 [wrapper] Test setup, not cleaning
[2025-10-13 09:38:14] 2025-10-13 07:38:13,998 [wrapper] apfmon messages muted
[2025-10-13 09:38:14] 2025-10-13 07:38:14,001 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:38:14] 2025-10-13 07:38:14,003 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:38:14]  *** Error codes and diagnostics ***
[2025-10-13 09:38:14]     "exeErrorCode": 0,
[2025-10-13 09:38:14]     "exeErrorDiag": "",
[2025-10-13 09:38:14]     "pilotErrorCode": 0,
[2025-10-13 09:38:14]     "pilotErrorDiag": "",
[2025-10-13 09:38:14]  *** Listing of results directory ***
[2025-10-13 09:38:14] total 413652
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:53 pilot3.tar.gz
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:56 queuedata.json
[2025-10-13 09:38:14] -rwx------ 1 boinc boinc     36292 Oct 12 20:57 runpilot2-wrapper.sh
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:38:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:13 run_atlas
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:13 job.xml
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc 220688923 Oct 13 08:13 EVNT.46676267._004430.pool.root.1
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc    569685 Oct 13 08:13 input.tar.gz
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:13 start_atlas.sh
[2025-10-13 09:38:14] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:13 shared
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:13 boinc_setup_complete
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc      6442 Oct 13 08:13 init_data.xml
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:13 boinc_lockfile
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:13 pandaJob.out
[2025-10-13 09:38:14] -rw------- 1 boinc boinc    973230 Oct 13 08:14 agis_schedconf.cvmfs.json
[2025-10-13 09:38:14] -rw------- 1 boinc boinc   1560580 Oct 13 08:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:38:14] drwx------ 5 boinc boinc      4096 Oct 13 08:14 pilot3
[2025-10-13 09:38:14] -rw------- 1 boinc boinc 197027545 Oct 13 09:37 HITS.46676269._086757.pool.root.1
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:37 boinc_task_state.xml
[2025-10-13 09:38:14] -rw------- 1 boinc boinc      1022 Oct 13 09:37 memory_monitor_summary.json
[2025-10-13 09:38:14] -rw------- 1 boinc boinc        95 Oct 13 09:37 pilot_heartbeat.json
[2025-10-13 09:38:14] -rw------- 1 boinc boinc    244279 Oct 13 09:37 log.46676269._086757.job.log.tgz.1
[2025-10-13 09:38:14] -rw------- 1 boinc boinc      7768 Oct 13 09:37 heartbeat.json
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:38 boinc_mmap_file
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:38 wrapper_checkpoint.txt
[2025-10-13 09:38:14] -rw------- 1 boinc boinc      4824 Oct 13 09:38 pilotlog.txt
[2025-10-13 09:38:14] -rw------- 1 boinc boinc    735490 Oct 13 09:38 log.46676269._086757.job.log.1
[2025-10-13 09:38:14] -rw------- 1 boinc boinc       357 Oct 13 09:38 output.list
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:38 runtime_log
[2025-10-13 09:38:14] -rw------- 1 boinc boinc   1003520 Oct 13 09:38 result.tar.gz
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc      8787 Oct 13 09:38 runtime_log.err
[2025-10-13 09:38:14] -rw------- 1 boinc boinc       660 Oct 13 09:38 XMbLDm3QGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVBlNDmteDutm.diag
[2025-10-13 09:38:14] -rw-r--r-- 1 boinc boinc     22014 Oct 13 09:38 stderr.txt
[2025-10-13 09:38:14] HITS file was successfully produced:
[2025-10-13 09:38:14] -rw------- 1 boinc boinc 197027545 Oct 13 09:37 shared/HITS.pool.root.1
[2025-10-13 09:38:14]  *** Contents of shared directory: ***
[2025-10-13 09:38:14] total 409492
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc 220688923 Oct 13 08:13 ATLAS.root_0
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc    569685 Oct 13 08:13 input.tar.gz
[2025-10-13 09:38:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:13 start_atlas.sh
[2025-10-13 09:38:14] -rw------- 1 boinc boinc 197027545 Oct 13 09:37 HITS.pool.root.1
[2025-10-13 09:38:14] -rw------- 1 boinc boinc   1003520 Oct 13 09:38 result.tar.gz
09:38:15 (4074401): run_atlas exited; CPU time 14346.596863
09:38:15 (4074401): called boinc_finish(0)

</stderr_txt>
]]>

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