Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:23 (306298): wrapper (7.7.26015): starting
00:02:23 (306298): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:02:23] Arguments: --nthreads 9
[2025-10-13 00:02:23] Threads: 9
[2025-10-13 00:02:23] Checking for CVMFS
[2025-10-13 00:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:24] 2.13.2.0 705810 130196 264596 151559 -3363 1198 22570250 32935936 19938 16776704 0 100780051 99.700 79663598 30008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:02:24] CVMFS is ok
[2025-10-13 00:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:24] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:24] Checking for apptainer binary...
[2025-10-13 00:02:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:24] Running /usr/bin/apptainer --version
[2025-10-13 00:02:25] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:25] c-8-16.aglt2.org
[2025-10-13 00:02:25] apptainer works
[2025-10-13 00:02:25] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:02:25] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:02:25] Starting ATLAS job with PandaID=6840390512
[2025-10-13 00:02:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:52:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | sum of deviations: 305431690125.1403
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | mean x: 1760343882.8849902
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | mean y: 2429143.0701754387
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | -- intersect: -12842271540.179668
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | intersect: -12842271540.179668
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | chi2: 2.3447740060029565
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | current chi2=2.3447740060029565 (change=0.4279164074205289 %)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,577 | INFO     | right removable region: 512
[2025-10-13 08:52:06] 2025-10-13 12:51:06,578 | INFO     | sum of square deviations: 41858322647.442505
[2025-10-13 08:52:06] 2025-10-13 12:51:06,582 | INFO     | sum of deviations: 201627942732.152
[2025-10-13 08:52:06] 2025-10-13 12:51:06,582 | INFO     | time since job start (31689s) is within the limit (172800.0s)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,582 | INFO     | mean x: 1760344187.8869395
[2025-10-13 08:52:06] 2025-10-13 12:51:06,583 | INFO     | mean y: 2444448.485380117
[2025-10-13 08:52:06] 2025-10-13 12:51:06,583 | INFO     | -- intersect: -8476982214.012061
[2025-10-13 08:52:06] 2025-10-13 12:51:06,583 | INFO     | intersect: -8476982214.012061
[2025-10-13 08:52:06] 2025-10-13 12:51:06,583 | INFO     | chi2: 0.30676751642456324
[2025-10-13 08:52:06] 2025-10-13 12:51:06,583 | INFO     | current chi2=0.30676751642456324 (change=86.97295316703708 %)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,584 | INFO     | sum of square deviations: 40645855824.464645
[2025-10-13 08:52:06] 2025-10-13 12:51:06,588 | INFO     | sum of deviations: 164874491687.46457
[2025-10-13 08:52:06] 2025-10-13 12:51:06,588 | INFO     | mean x: 1760344340.4055119
[2025-10-13 08:52:06] 2025-10-13 12:51:06,588 | INFO     | mean y: 2449067.905511811
[2025-10-13 08:52:06] 2025-10-13 12:51:06,588 | INFO     | -- intersect: -7138152905.705081
[2025-10-13 08:52:06] 2025-10-13 12:51:06,588 | INFO     | intersect: -7138152905.705081
[2025-10-13 08:52:06] 2025-10-13 12:51:06,589 | INFO     | chi2: 0.15489518532635824
[2025-10-13 08:52:06] 2025-10-13 12:51:06,589 | INFO     | current chi2=0.15489518532635824 (change=49.507305358894385 %)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,589 | INFO     | sum of square deviations: 39457172059.32411
[2025-10-13 08:52:06] 2025-10-13 12:51:06,593 | INFO     | sum of deviations: 143222111483.2644
[2025-10-13 08:52:06] 2025-10-13 12:51:06,593 | INFO     | mean x: 1760344492.9145129
[2025-10-13 08:52:06] 2025-10-13 12:51:06,593 | INFO     | mean y: 2451838.9363817098
[2025-10-13 08:52:06] 2025-10-13 12:51:06,593 | INFO     | -- intersect: -6387267496.095752
[2025-10-13 08:52:06] 2025-10-13 12:51:06,593 | INFO     | intersect: -6387267496.095752
[2025-10-13 08:52:06] 2025-10-13 12:51:06,594 | INFO     | chi2: 0.09480158356214624
[2025-10-13 08:52:06] 2025-10-13 12:51:06,594 | INFO     | current chi2=0.09480158356214624 (change=38.79630063232571 %)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,594 | INFO     | sum of square deviations: 38291885055.60052
[2025-10-13 08:52:06] 2025-10-13 12:51:06,598 | INFO     | sum of deviations: 134306104239.1325
[2025-10-13 08:52:06] 2025-10-13 12:51:06,598 | INFO     | mean x: 1760344645.4236948
[2025-10-13 08:52:06] 2025-10-13 12:51:06,598 | INFO     | mean y: 2453005.8192771086
[2025-10-13 08:52:06] 2025-10-13 12:51:06,598 | INFO     | -- intersect: -6171832514.51434
[2025-10-13 08:52:06] 2025-10-13 12:51:06,598 | INFO     | intersect: -6171832514.51434
[2025-10-13 08:52:06] 2025-10-13 12:51:06,599 | INFO     | chi2: 0.09132452670122855
[2025-10-13 08:52:06] 2025-10-13 12:51:06,599 | INFO     | current chi2=0.09132452670122855 (change=3.667720232371794 %)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,599 | INFO     | left removable region: 40
[2025-10-13 08:52:06] 2025-10-13 12:51:06,600 | INFO     | sum of square deviations: 32601888987.25429
[2025-10-13 08:52:06] 2025-10-13 12:51:06,603 | INFO     | sum of deviations: 101363843524.18634
[2025-10-13 08:52:06] 2025-10-13 12:51:06,603 | INFO     | mean x: 1760345072.4237287
[2025-10-13 08:52:06] 2025-10-13 12:51:06,603 | INFO     | mean y: 2455207.0190677964
[2025-10-13 08:52:06] 2025-10-13 12:51:06,603 | INFO     | -- intersect: -5470704416.9367895
[2025-10-13 08:52:06] 2025-10-13 12:51:06,603 | INFO     | intersect: -5470704416.9367895
[2025-10-13 08:52:06] 2025-10-13 12:51:06,604 | INFO     | chi2: 0.07349481544557972
[2025-10-13 08:52:06] 2025-10-13 12:51:06,604 | INFO     | -- intersect: -5470704416.9367895
[2025-10-13 08:52:06] 2025-10-13 12:51:06,604 | INFO     | current memory leak: 3.11 B/s (using 472 data points, chi2=0.07)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | could have reported an average CPU frequency of 2603 MHz (21 samples)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | ..............................
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . Timing measurements:
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . get job = 0 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . initial setup = 4 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . payload setup = 19 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . stage-in = 0 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . payload execution = 31616 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . stage-out = 2 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | . log creation = 0 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,605 | INFO     | ..............................
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | 
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | job summary report
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | --------------------------------------------------
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | PanDA job id: 6840390512
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | task id: 46676269
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | errors: (none)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | pilot state: finished 
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | transexitcode: 0
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | exeerrorcode: 0
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | exeerrordiag: 
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | exitcode: 0
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | exitmsg: OK
[2025-10-13 08:52:06] 2025-10-13 12:51:06,680 | INFO     | cpuconsumptiontime: 50446 s
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | nevents: 400
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | neventsw: 0
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | pid: 334385
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | pgrp: 334385
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | corecount: 9
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | event service: False
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2349231, 24: 2349231, 31640: 2387512, 31642: 2396510, 31644: 2396566, 31648: 2396760}
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | --------------------------------------------------
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | 
[2025-10-13 08:52:06] 2025-10-13 12:51:06,681 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 08:52:06] 2025-10-13 12:51:06,702 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:52:06] 2025-10-13 12:51:06,705 | INFO     | job 6840390512 has completed (purged errors)
[2025-10-13 08:52:06] 2025-10-13 12:51:06,705 | INFO     | overall cleanup function is called
[2025-10-13 08:52:06] 2025-10-13 12:51:07,713 | INFO     | --- collectZombieJob: --- 10, [334385]
[2025-10-13 08:52:06] 2025-10-13 12:51:07,713 | INFO     | zombie collector waiting for pid 334385
[2025-10-13 08:52:06] 2025-10-13 12:51:07,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:52:06] 2025-10-13 12:51:07,713 | INFO     | collected zombie processes
[2025-10-13 08:52:06] 2025-10-13 12:51:07,713 | INFO     | will attempt to kill all subprocesses of pid=334385
[2025-10-13 08:52:06] 2025-10-13 12:51:08,345 | INFO     | PID=313876 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:52:06] 2025-10-13 12:51:08,345 | INFO     | .. there are 21 such processes running
[2025-10-13 08:52:06] 2025-10-13 12:51:08,426 | INFO     | process IDs to be killed: [334385] (in reverse order)
[2025-10-13 08:52:06] 2025-10-13 12:51:08,526 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:52:06] 2025-10-13 12:51:08,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:52:06] 2025-10-13 12:51:08,538 | INFO     | did not find any defunct processes belonging to 334385
[2025-10-13 08:52:06] 2025-10-13 12:51:08,549 | INFO     | did not find any defunct processes belonging to 334385
[2025-10-13 08:52:06] 2025-10-13 12:51:08,549 | INFO     | ready for new job
[2025-10-13 08:52:06] 2025-10-13 12:51:08,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:52:06] 2025-10-13 12:51:08,552 | INFO     | ***************************************
[2025-10-13 08:52:06] 2025-10-13 12:51:08,552 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:52:06] 2025-10-13 12:51:08,552 | INFO     | ***************************************
[2025-10-13 08:52:06] 2025-10-13 12:51:08,553 | INFO     | 
[2025-10-13 08:52:06] 2025-10-13 12:51:08,566 | INFO     | architecture information:
[2025-10-13 08:52:06] 2025-10-13 12:51:08,567 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:52:06] 2025-10-13 12:51:08,582 | INFO     | cat /etc/os-release:
[2025-10-13 08:52:06] NAME="CentOS Linux"
[2025-10-13 08:52:06] VERSION="7 (Core)"
[2025-10-13 08:52:06] ID="centos"
[2025-10-13 08:52:06] ID_LIKE="rhel fedora"
[2025-10-13 08:52:06] VERSION_ID="7"
[2025-10-13 08:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:52:06] ANSI_COLOR="0;31"
[2025-10-13 08:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:52:06] HOME_URL="https://www.centos.org/"
[2025-10-13 08:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:52:06] 
[2025-10-13 08:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:52:06] 
[2025-10-13 08:52:06] 2025-10-13 12:51:08,583 | INFO     | ***************************************
[2025-10-13 08:52:06] 2025-10-13 12:51:09,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 08:52:06] 2025-10-13 12:51:09,103 | INFO     | sufficient remaining disk space (74982621184 B)
[2025-10-13 08:52:06] 2025-10-13 12:51:09,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:52:06] 2025-10-13 12:51:09,104 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:52:06] 2025-10-13 12:51:09,104 | INFO     | update_server=False
[2025-10-13 08:52:06] 2025-10-13 12:51:09,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:52:06] 2025-10-13 12:51:09,104 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 08:52:06] 2025-10-13 12:51:09,105 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:52:06] 2025-10-13 12:51:09,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:52:06] 2025-10-13 12:51:09,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:52:06] 2025-10-13 12:51:09,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:52:06] 2025-10-13 12:51:09,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:52:06] 2025-10-13 12:51:09,449 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:52:06] 2025-10-13 12:51:09,449 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:52:06] 2025-10-13 12:51:09,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:52:06] 2025-10-13 12:51:09,449 | INFO     | will abort loop
[2025-10-13 08:52:06] 2025-10-13 12:51:09,684 | INFO     | all payload control threads have been joined
[2025-10-13 08:52:06] 2025-10-13 12:51:09,939 | INFO     | all job control threads have been joined
[2025-10-13 08:52:06] 2025-10-13 12:51:10,040 | INFO     | all data control threads have been joined
[2025-10-13 08:52:06] 2025-10-13 12:51:10,109 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,364 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,458 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,690 | INFO     | [payload] control thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,712 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,756 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,903 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:10,944 | INFO     | [job] control thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,016 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,045 | INFO     | [data] control thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,112 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,372 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,418 | INFO     | [job] validate thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:11,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:52:06] 2025-10-13 12:51:12,708 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:51:13,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:52:06] 2025-10-13 12:52:00,693 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:52:06] 2025-10-13 12:52:01,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166430242624)>', '<ExcThread(monitor, started 140165695653632)>']
[2025-10-13 08:52:06] 2025-10-13 12:52:01,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:52:06] 2025-10-13 12:52:01,378 | INFO     | [monitor] control thread has ended
[2025-10-13 08:52:06] 2025-10-13 12:52:06,260 | INFO     | all workflow threads have been joined
[2025-10-13 08:52:06] 2025-10-13 12:52:06,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:52:06] 2025-10-13 12:52:06,261 | INFO     | traces error code: 0
[2025-10-13 08:52:06] 2025-10-13 12:52:06,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:52:06] 2025-10-13 12:52:06,460 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:52:06] 2025-10-13 12:52:06,463 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:52:06] 2025-10-13 12:52:06,465 [wrapper] pilotpid: 313876
[2025-10-13 08:52:06] 2025-10-13 12:52:06,468 [wrapper] Pilot exit status: 0
[2025-10-13 08:52:06] 2025-10-13 12:52:06,480 [wrapper] pandaids: 6840390512
[2025-10-13 08:52:06] 2025-10-13 12:52:06,560 [wrapper] cleanup supervisor_pilot 1743291 313877
[2025-10-13 08:52:06] 2025-10-13 12:52:06,564 [wrapper] Test setup, not cleaning
[2025-10-13 08:52:06] 2025-10-13 12:52:06,572 [wrapper] apfmon messages muted
[2025-10-13 08:52:06] 2025-10-13 12:52:06,575 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:52:06] 2025-10-13 12:52:06,579 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:52:06]  *** Error codes and diagnostics ***
[2025-10-13 08:52:06]     "exeErrorCode": 0,
[2025-10-13 08:52:06]     "exeErrorDiag": "",
[2025-10-13 08:52:06]     "pilotErrorCode": 0,
[2025-10-13 08:52:06]     "pilotErrorDiag": "",
[2025-10-13 08:52:06]  *** Listing of results directory ***
[2025-10-13 08:52:06] total 418796
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:21 queuedata.json
[2025-10-13 08:52:06] -rwx------. 1 boincer umatlas     36292 Oct 12 12:22 runpilot2-wrapper.sh
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:52:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas 222314259 Oct 13 00:02 EVNT.46676267._004736.pool.root.1
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 08:52:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:02 input.tar.gz
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas    975541 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 08:52:06] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas      6656 Oct 13 08:49 init_data.xml
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas        95 Oct 13 08:50 pilot_heartbeat.json
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas 194061166 Oct 13 08:50 HITS.46676269._083344.pool.root.1
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:50 boinc_task_state.xml
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas      1040 Oct 13 08:50 memory_monitor_summary.json
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas    670371 Oct 13 08:51 log.46676269._083344.job.log.tgz.1
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas      7822 Oct 13 08:51 heartbeat.json
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:52 boinc_mmap_file
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:52 wrapper_checkpoint.txt
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas      4738 Oct 13 08:52 pilotlog.txt
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas   3613606 Oct 13 08:52 log.46676269._083344.job.log.1
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas       357 Oct 13 08:52 output.list
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:52 runtime_log
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas   4300800 Oct 13 08:52 result.tar.gz
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 08:52 runtime_log.err
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas       655 Oct 13 08:52 l4JNDmY1DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmubkNDmW2aPFm.diag
[2025-10-13 08:52:06] -rw-r--r--. 1 boincer umatlas     21131 Oct 13 08:52 stderr.txt
[2025-10-13 08:52:06] HITS file was successfully produced:
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas 194061166 Oct 13 08:50 shared/HITS.pool.root.1
[2025-10-13 08:52:06]  *** Contents of shared directory: ***
[2025-10-13 08:52:06] total 411404
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas 222314259 Oct 13 00:02 ATLAS.root_0
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 08:52:06] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:02 input.tar.gz
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas 194061166 Oct 13 08:50 HITS.pool.root.1
[2025-10-13 08:52:06] -rw-------. 1 boincer umatlas   4300800 Oct 13 08:52 result.tar.gz
08:52:07 (306298): run_atlas exited; CPU time 51303.538210
08:52:07 (306298): called boinc_finish(0)

</stderr_txt>
]]>

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