Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:28:29 (2640655): wrapper (7.7.26015): starting
17:28:29 (2640655): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 17:28:29] Arguments: --nthreads 9
[2025-10-12 17:28:29] Threads: 9
[2025-10-12 17:28:29] Checking for CVMFS
[2025-10-12 17:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:28:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:28:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:28:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:28:30] 2.13.2.0 1483043 129801 522916 151638 0 206 26818939 40959995 43704 16776704 0 454146336 99.752 298425885 16755 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 17:28:30] CVMFS is ok
[2025-10-12 17:28:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:28:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:28:30] Further information can be found at the LHC@home message board.
[2025-10-12 17:28:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:28:30] Checking for apptainer binary...
[2025-10-12 17:28:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:28:30] Running /usr/bin/apptainer --version
[2025-10-12 17:28:30] apptainer version 1.4.3-1.el9
[2025-10-12 17:28:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:28:31] c7-4-30.aglt2.org
[2025-10-12 17:28:31] apptainer works
[2025-10-12 17:28:31] Set ATHENA_PROC_NUMBER=9
[2025-10-12 17:28:31] Set ATHENA_CORE_NUMBER=9
[2025-10-12 17:28:31] Starting ATLAS job with PandaID=6840428527
[2025-10-12 17:28:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:04:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:04:34] 2025-10-13 00:50:39,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:04:34] 2025-10-13 00:50:39,687 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:04:34] 2025-10-13 00:50:39,687 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:04:34] 2025-10-13 00:50:39,690 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:04:34] 2025-10-13 00:50:39,690 | INFO     | sum of square deviations: 2370622300.0507765
[2025-10-12 21:04:34] 2025-10-13 00:50:39,691 | INFO     | sum of deviations: -31912580787.939087
[2025-10-12 21:04:34] 2025-10-13 00:50:39,691 | INFO     | mean x: 1760310585.1878173
[2025-10-12 21:04:34] 2025-10-13 00:50:39,691 | INFO     | mean y: 2227756.0253807106
[2025-10-12 21:04:34] 2025-10-13 00:50:39,691 | INFO     | -- intersect: 23698981878.547264
[2025-10-12 21:04:34] 2025-10-13 00:50:39,692 | INFO     | intersect: 23698981878.547264
[2025-10-12 21:04:34] 2025-10-13 00:50:39,692 | INFO     | chi2: 3.1115077769736565
[2025-10-12 21:04:34] 2025-10-13 00:50:39,692 | INFO     | sum of square deviations: 2194667494.8698
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | sum of deviations: -17748322213.81251
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | mean x: 1760310432.6927083
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | mean y: 2239810.5625
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | -- intersect: 14237907322.2916
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | intersect: 14237907322.2916
[2025-10-12 21:04:34] 2025-10-13 00:50:39,693 | INFO     | chi2: 2.241748108922725
[2025-10-12 21:04:34] 2025-10-13 00:50:39,694 | INFO     | current chi2=2.241748108922725 (change=27.952996758918125 %)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,694 | INFO     | sum of square deviations: 2027643089.6791458
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | sum of deviations: -17288711658.7861
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | mean x: 1760310280.197861
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | mean y: 2240230.5347593585
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | -- intersect: 15011536994.470455
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | intersect: 15011536994.470455
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | chi2: 2.2373101932922683
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | current chi2=2.2373101932922683 (change=0.19796673911723459 %)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,695 | INFO     | right removable region: 186
[2025-10-12 21:04:34] 2025-10-13 00:50:39,696 | INFO     | sum of square deviations: 2194644924.8698
[2025-10-12 21:04:34] 2025-10-13 00:50:39,696 | INFO     | sum of deviations: -62902713340.20316
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | mean x: 1760310737.6927083
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | mean y: 2254352.640625
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | -- intersect: 50456120701.58319
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | intersect: 50456120701.58319
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | chi2: 1.3529821020141912
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | current chi2=1.3529821020141912 (change=56.5168336705833 %)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,697 | INFO     | sum of square deviations: 2027597949.6791458
[2025-10-12 21:04:34] 2025-10-13 00:50:39,698 | INFO     | sum of deviations: -56226429189.49732
[2025-10-12 21:04:34] 2025-10-13 00:50:39,698 | INFO     | mean x: 1760310890.197861
[2025-10-12 21:04:34] 2025-10-13 00:50:39,698 | INFO     | mean y: 2248248.256684492
[2025-10-12 21:04:34] 2025-10-13 00:50:39,698 | INFO     | -- intersect: 48816657256.1536
[2025-10-12 21:04:34] 2025-10-13 00:50:39,699 | INFO     | intersect: 48816657256.1536
[2025-10-12 21:04:34] 2025-10-13 00:50:39,699 | INFO     | chi2: 1.346000499505357
[2025-10-12 21:04:34] 2025-10-13 00:50:39,699 | INFO     | current chi2=1.346000499505357 (change=0.5160158806565687 %)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,699 | INFO     | left removable region: 20
[2025-10-12 21:04:34] 2025-10-13 00:50:39,699 | INFO     | sum of square deviations: 1418342666.1204836
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | sum of deviations: -24358573952.759037
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | mean x: 1760310859.7108433
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | mean y: 2244039.921686747
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | -- intersect: 30233769383.08514
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | intersect: 30233769383.08514
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | chi2: 0.3536973015836768
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | -- intersect: 30233769383.08514
[2025-10-12 21:04:34] 2025-10-13 00:50:39,700 | INFO     | current memory leak: -17.17 B/s (using 166 data points, chi2=0.35)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | could have reported an average CPU frequency of 3231 MHz (10 samples)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | ..............................
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | . Timing measurements:
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | . get job = 0 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | . initial setup = 4 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | . payload setup = 20 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,701 | INFO     | . stage-in = 0 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,702 | INFO     | . payload execution = 12004 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,702 | INFO     | . stage-out = 4 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,702 | INFO     | . log creation = 0 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,702 | INFO     | ..............................
[2025-10-12 21:04:34] 2025-10-13 00:50:39,770 | INFO     | 
[2025-10-12 21:04:34] 2025-10-13 00:50:39,770 | INFO     | job summary report
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | --------------------------------------------------
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | PanDA job id: 6840428527
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | task id: 46676269
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | errors: (none)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | pilot state: finished 
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | transexitcode: 0
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | exeerrorcode: 0
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | exeerrordiag: 
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | exitcode: 0
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | exitmsg: OK
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | cpuconsumptiontime: 30831 s
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | nevents: 400
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | neventsw: 0
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | pid: 2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:39,771 | INFO     | pgrp: 2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | corecount: 9
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | event service: False
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | sizes: {0: 2348857, 11: 2348857, 13: 2349147, 22: 2349203, 12029: 2378638, 12034: 2387636, 12036: 2387820, 12064: 2388014}
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | --------------------------------------------------
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | 
[2025-10-12 21:04:34] 2025-10-13 00:50:39,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 21:04:34] 2025-10-13 00:50:39,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | job 6840428527 has completed (purged errors)
[2025-10-12 21:04:34] 2025-10-13 00:50:39,816 | INFO     | overall cleanup function is called
[2025-10-12 21:04:34] 2025-10-13 00:50:40,825 | INFO     | --- collectZombieJob: --- 10, [2662373]
[2025-10-12 21:04:34] 2025-10-13 00:50:40,825 | INFO     | zombie collector waiting for pid 2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:40,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:04:34] 2025-10-13 00:50:40,825 | INFO     | collected zombie processes
[2025-10-12 21:04:34] 2025-10-13 00:50:40,826 | INFO     | will attempt to kill all subprocesses of pid=2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:43,616 | INFO     | process IDs to be killed: [2662373] (in reverse order)
[2025-10-12 21:04:34] 2025-10-13 00:50:43,974 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:04:34] 2025-10-13 00:50:43,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:04:34] 2025-10-13 00:50:44,041 | INFO     | did not find any defunct processes belonging to 2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:44,154 | INFO     | did not find any defunct processes belonging to 2662373
[2025-10-12 21:04:34] 2025-10-13 00:50:44,155 | INFO     | ready for new job
[2025-10-12 21:04:34] 2025-10-13 00:50:44,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:04:34] 2025-10-13 00:50:44,182 | INFO     | ***************************************
[2025-10-12 21:04:34] 2025-10-13 00:50:44,182 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:04:34] 2025-10-13 00:50:44,182 | INFO     | ***************************************
[2025-10-12 21:04:34] 2025-10-13 00:50:44,182 | INFO     | 
[2025-10-12 21:04:34] 2025-10-13 00:50:44,235 | INFO     | architecture information:
[2025-10-12 21:04:34] 2025-10-13 00:50:44,243 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:04:34] 2025-10-13 00:50:44,354 | INFO     | cat /etc/os-release:
[2025-10-12 21:04:34] NAME="CentOS Linux"
[2025-10-12 21:04:34] VERSION="7 (Core)"
[2025-10-12 21:04:34] ID="centos"
[2025-10-12 21:04:34] ID_LIKE="rhel fedora"
[2025-10-12 21:04:34] VERSION_ID="7"
[2025-10-12 21:04:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:04:34] ANSI_COLOR="0;31"
[2025-10-12 21:04:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:04:34] HOME_URL="https://www.centos.org/"
[2025-10-12 21:04:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:04:34] 
[2025-10-12 21:04:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:04:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:04:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:04:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:04:34] 
[2025-10-12 21:04:34] 2025-10-13 00:50:44,354 | INFO     | ***************************************
[2025-10-12 21:04:34] 2025-10-13 00:50:44,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | INFO     | sufficient remaining disk space (127480627200 B)
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | INFO     | update_server=False
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:04:34] 2025-10-13 00:50:44,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:04:34] 2025-10-13 00:50:45,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:04:34] 2025-10-13 00:50:45,489 | INFO     | all data control threads have been joined
[2025-10-12 21:04:34] 2025-10-13 00:50:45,519 | INFO     | all payload control threads have been joined
[2025-10-12 21:04:34] 2025-10-13 00:50:45,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:04:34] 2025-10-13 00:50:45,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:04:34] 2025-10-13 00:50:45,748 | INFO     | aborting loop
[2025-10-12 21:04:34] 2025-10-13 00:50:45,908 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:45,909 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:45,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:45,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,097 | INFO     | all job control threads have been joined
[2025-10-12 21:04:34] 2025-10-13 00:50:46,114 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,242 | INFO     | [job] validate thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,469 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,496 | INFO     | [data] control thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,525 | INFO     | [payload] control thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:46,754 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:47,002 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:47,023 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:47,104 | INFO     | [job] control thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:47,229 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:47,724 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:50:49,320 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:04:34] 2025-10-13 00:51:14,440 | INFO     | PID=2648494 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:04:34] 2025-10-13 00:51:14,440 | INFO     | .. there are 61 such processes running
[2025-10-12 21:04:34] 2025-10-13 00:51:14,441 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:04:34] 2025-10-13 00:51:14,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:04:34] 2025-10-13 00:51:14,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:04:34] 2025-10-13 00:51:22,543 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:04:34] 2025-10-13 00:51:23,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916730840896)>', '<ExcThread(monitor, started 139916377831168)>']
[2025-10-12 21:04:34] 2025-10-13 00:51:23,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:04:34] 2025-10-13 00:51:23,508 | INFO     | [monitor] control thread has ended
[2025-10-12 21:04:34] 2025-10-13 00:51:28,339 | INFO     | all workflow threads have been joined
[2025-10-12 21:04:34] 2025-10-13 00:51:28,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:04:34] 2025-10-13 00:51:28,339 | INFO     | traces error code: 0
[2025-10-12 21:04:34] 2025-10-13 00:51:28,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:04:34] 2025-10-13 00:51:28,633 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:04:34] 2025-10-13 00:51:28,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:04:34] 2025-10-13 00:51:28,685 [wrapper] pilotpid: 2648494
[2025-10-12 21:04:34] 2025-10-13 00:51:28,708 [wrapper] Pilot exit status: 0
[2025-10-12 21:04:34] 2025-10-13 00:51:28,867 [wrapper] pandaids: 6840428527
[2025-10-12 21:04:34] 2025-10-13 00:51:29,295 [wrapper] cleanup supervisor_pilot 3808195 2648495
[2025-10-12 21:04:34] 2025-10-13 00:51:29,309 [wrapper] Test setup, not cleaning
[2025-10-12 21:04:34] 2025-10-13 00:51:29,346 [wrapper] apfmon messages muted
[2025-10-12 21:04:34] 2025-10-13 00:51:29,379 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:04:34] 2025-10-13 00:51:29,415 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:04:34]  *** Error codes and diagnostics ***
[2025-10-12 21:04:34]     "exeErrorCode": 0,
[2025-10-12 21:04:34]     "exeErrorDiag": "",
[2025-10-12 21:04:34]     "pilotErrorCode": 0,
[2025-10-12 21:04:34]     "pilotErrorDiag": "",
[2025-10-12 21:04:34]  *** Listing of results directory ***
[2025-10-12 21:04:34] total 412604
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:56 queuedata.json
[2025-10-12 21:04:34] -rwx------. 1 boincer umatlas     36292 Oct 12 12:57 runpilot2-wrapper.sh
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:04:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:28 run_atlas
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:28 job.xml
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas 222288465 Oct 12 17:28 EVNT.46676267._004790.pool.root.1
[2025-10-12 21:04:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:28 shared
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 17:28 input.tar.gz
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:28 start_atlas.sh
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:28 boinc_lockfile
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:28 pandaJob.out
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas    975528 Oct 12 17:28 agis_schedconf.cvmfs.json
[2025-10-12 21:04:34] drwx------. 5 boincer umatlas      4096 Oct 12 17:29 pilot3
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas 192581212 Oct 12 20:49 HITS.46676269._084129.pool.root.1
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas       530 Oct 12 20:49 boinc_task_state.xml
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas      1043 Oct 12 20:50 memory_monitor_summary.json
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas    420892 Oct 12 20:50 log.46676269._084129.job.log.tgz.1
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas      7799 Oct 12 20:50 heartbeat.json
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas        95 Oct 12 20:51 pilot_heartbeat.json
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas      4825 Oct 12 20:51 pilotlog.txt
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas   1447924 Oct 12 20:51 log.46676269._084129.job.log.1
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas       357 Oct 12 20:51 output.list
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:51 runtime_log
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas   1884160 Oct 12 20:51 result.tar.gz
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 20:51 runtime_log.err
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas       658 Oct 12 20:51 rGJKDmEZES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkkkNDm3c0mKo.diag
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas      6939 Oct 12 21:04 init_data.xml
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:04 boinc_mmap_file
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:04 wrapper_checkpoint.txt
[2025-10-12 21:04:34] -rw-r--r--. 1 boincer umatlas     20969 Oct 12 21:04 stderr.txt
[2025-10-12 21:04:34] HITS file was successfully produced:
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas 192581212 Oct 12 20:49 shared/HITS.pool.root.1
[2025-10-12 21:04:34]  *** Contents of shared directory: ***
[2025-10-12 21:04:34] total 407572
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas 222288465 Oct 12 17:28 ATLAS.root_0
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 17:28 input.tar.gz
[2025-10-12 21:04:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:28 start_atlas.sh
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas 192581212 Oct 12 20:49 HITS.pool.root.1
[2025-10-12 21:04:34] -rw-------. 1 boincer umatlas   1884160 Oct 12 20:51 result.tar.gz
21:04:36 (2640655): run_atlas exited; CPU time 31400.453832
21:04:36 (2640655): called boinc_finish(0)

</stderr_txt>
]]>

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