Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:42:30 (1104673): wrapper (7.7.26015): starting
16:42:30 (1104673): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 16:42:30] Arguments: --nthreads 9
[2025-10-12 16:42:30] Threads: 9
[2025-10-12 16:42:30] Checking for CVMFS
[2025-10-12 16:42:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:42:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:42:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:42:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:42:31] 2.13.2.0 1602499 124303 174744 151636 3 490 23526703 40960001 26488 16776704 0 305341230 99.734 202727459 35263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:42:31] CVMFS is ok
[2025-10-12 16:42:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:42:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:42:31] Further information can be found at the LHC@home message board.
[2025-10-12 16:42:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:42:31] Checking for apptainer binary...
[2025-10-12 16:42:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:42:31] Running /usr/bin/apptainer --version
[2025-10-12 16:42:31] apptainer version 1.4.3-1.el9
[2025-10-12 16:42:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:42:31] c-212-17.aglt2.org
[2025-10-12 16:42:31] apptainer works
[2025-10-12 16:42:31] Set ATHENA_PROC_NUMBER=9
[2025-10-12 16:42:31] Set ATHENA_CORE_NUMBER=9
[2025-10-12 16:42:31] Starting ATLAS job with PandaID=6840390907
[2025-10-12 16:42:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:04:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:04:15] 2025-10-13 00:03:19,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:04:15] 2025-10-13 00:03:19,791 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:04:15] 2025-10-13 00:03:19,791 | INFO     | sum of square deviations: 2370689276.304574
[2025-10-12 20:04:15] 2025-10-13 00:03:19,816 | INFO     | sum of deviations: -11932409164.802032
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | mean x: 1760307780.2436547
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | mean y: 2542108.5583756347
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | -- intersect: 8862713240.978487
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | intersect: 8862713240.978487
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | chi2: 3.0688064692752515
[2025-10-12 20:04:15] 2025-10-13 00:03:19,817 | INFO     | sum of square deviations: 2194737826.0
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | sum of deviations: 1879734973.0
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | mean x: 1760307627.75
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | mean y: 2553841.625
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | -- intersect: -1505103142.2394319
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | intersect: -1505103142.2394319
[2025-10-12 20:04:15] 2025-10-13 00:03:19,819 | INFO     | chi2: 2.2984976440754523
[2025-10-12 20:04:15] 2025-10-13 00:03:19,839 | INFO     | current chi2=2.2984976440754523 (change=25.1012513468052 %)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,839 | INFO     | sum of square deviations: 2027681760.1711226
[2025-10-12 20:04:15] 2025-10-13 00:03:19,840 | INFO     | sum of deviations: 2109937977.5133657
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | mean x: 1760307475.2406416
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | mean y: 2554051.721925134
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | -- intersect: -1829163166.9591022
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | intersect: -1829163166.9591022
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | chi2: 2.2995349723311644
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | current chi2=2.2995349723311644 (change=-0.04513070780759391 %)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,841 | INFO     | right removable region: 186
[2025-10-12 20:04:15] 2025-10-13 00:03:19,842 | INFO     | sum of square deviations: 2194708546.0
[2025-10-12 20:04:15] 2025-10-13 00:03:19,866 | INFO     | sum of deviations: -52691470588.25001
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | mean x: 1760307932.75
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | mean y: 2577166.1614583335
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | -- intersect: 42264778146.70104
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | intersect: 42264778146.70104
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | chi2: 1.090440037735895
[2025-10-12 20:04:15] 2025-10-13 00:03:19,867 | INFO     | current chi2=1.090440037735895 (change=64.46696627326193 %)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,868 | INFO     | sum of square deviations: 2027658215.679148
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | sum of deviations: -51248865390.588264
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | mean x: 1760308085.2566845
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | mean y: 2575769.470588235
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | -- intersect: 44494192457.97034
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | intersect: 44494192457.97034
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | chi2: 1.056824109478711
[2025-10-12 20:04:15] 2025-10-13 00:03:19,869 | INFO     | current chi2=1.056824109478711 (change=3.0827855814045 %)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,887 | INFO     | left removable region: 20
[2025-10-12 20:04:15] 2025-10-13 00:03:19,887 | INFO     | sum of square deviations: 1418361511.8373551
[2025-10-12 20:04:15] 2025-10-13 00:03:19,888 | INFO     | sum of deviations: -18372179916.819283
[2025-10-12 20:04:15] 2025-10-13 00:03:19,888 | INFO     | mean x: 1760308054.7650602
[2025-10-12 20:04:15] 2025-10-13 00:03:19,888 | INFO     | mean y: 2571039.9277108433
[2025-10-12 20:04:15] 2025-10-13 00:03:19,889 | INFO     | -- intersect: 22804019063.764385
[2025-10-12 20:04:15] 2025-10-13 00:03:19,889 | INFO     | intersect: 22804019063.764385
[2025-10-12 20:04:15] 2025-10-13 00:03:19,889 | INFO     | chi2: 0.1657739014461571
[2025-10-12 20:04:15] 2025-10-13 00:03:19,889 | INFO     | -- intersect: 22804019063.764385
[2025-10-12 20:04:15] 2025-10-13 00:03:19,889 | INFO     | current memory leak: -12.95 B/s (using 166 data points, chi2=0.17)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,890 | INFO     | could have reported an average CPU frequency of 3183 MHz (10 samples)
[2025-10-12 20:04:15] 2025-10-13 00:03:19,890 | INFO     | ..............................
[2025-10-12 20:04:15] 2025-10-13 00:03:19,890 | INFO     | . Timing measurements:
[2025-10-12 20:04:15] 2025-10-13 00:03:19,890 | INFO     | . get job = 0 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . initial setup = 2 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . payload setup = 9 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . stage-in = 0 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . payload execution = 11983 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . stage-out = 2 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | . log creation = 0 s
[2025-10-12 20:04:15] 2025-10-13 00:03:19,913 | INFO     | ..............................
[2025-10-12 20:04:15] 2025-10-13 00:03:19,872 | INFO     | monitor loop #740: job 0:6840390907 is in state 'finished'
[2025-10-12 20:04:15] 2025-10-13 00:03:19,955 | WARNING  | exception caught: deque index out of range
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | 
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | job summary report
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | --------------------------------------------------
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | PanDA job id: 6840390907
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | task id: 46676269
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | errors: (none)
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | pilot state: finished 
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | transexitcode: 0
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | exeerrorcode: 0
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | exeerrordiag: 
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | exitcode: 0
[2025-10-12 20:04:15] 2025-10-13 00:03:20,413 | INFO     | exitmsg: OK
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | cpuconsumptiontime: 36857 s
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | nevents: 400
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | neventsw: 0
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | pid: 1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | pgrp: 1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | corecount: 9
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | event service: False
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 11994: 2378611, 11998: 2387609, 12001: 2387665, 12015: 2387987}
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | --------------------------------------------------
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | 
[2025-10-12 20:04:15] 2025-10-13 00:03:20,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:04:15] 2025-10-13 00:03:20,566 | INFO     | job 6840390907 has completed (purged errors)
[2025-10-12 20:04:15] 2025-10-13 00:03:20,567 | INFO     | overall cleanup function is called
[2025-10-12 20:04:15] 2025-10-13 00:03:21,607 | INFO     | --- collectZombieJob: --- 10, [1116017]
[2025-10-12 20:04:15] 2025-10-13 00:03:21,608 | INFO     | zombie collector waiting for pid 1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:21,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:04:15] 2025-10-13 00:03:21,608 | INFO     | collected zombie processes
[2025-10-12 20:04:15] 2025-10-13 00:03:21,608 | INFO     | will attempt to kill all subprocesses of pid=1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:22,718 | INFO     | process IDs to be killed: [1116017] (in reverse order)
[2025-10-12 20:04:15] 2025-10-13 00:03:23,599 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:04:15] 2025-10-13 00:03:23,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:04:15] 2025-10-13 00:03:23,676 | INFO     | did not find any defunct processes belonging to 1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:23,729 | INFO     | did not find any defunct processes belonging to 1116017
[2025-10-12 20:04:15] 2025-10-13 00:03:23,730 | INFO     | ready for new job
[2025-10-12 20:04:15] 2025-10-13 00:03:23,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:04:15] 2025-10-13 00:03:23,732 | INFO     | ***************************************
[2025-10-12 20:04:15] 2025-10-13 00:03:23,732 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:04:15] 2025-10-13 00:03:23,732 | INFO     | ***************************************
[2025-10-12 20:04:15] 2025-10-13 00:03:23,732 | INFO     | 
[2025-10-12 20:04:15] 2025-10-13 00:03:23,754 | INFO     | architecture information:
[2025-10-12 20:04:15] 2025-10-13 00:03:23,762 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:04:15] 2025-10-13 00:03:23,807 | INFO     | cat /etc/os-release:
[2025-10-12 20:04:15] NAME="CentOS Linux"
[2025-10-12 20:04:15] VERSION="7 (Core)"
[2025-10-12 20:04:15] ID="centos"
[2025-10-12 20:04:15] ID_LIKE="rhel fedora"
[2025-10-12 20:04:15] VERSION_ID="7"
[2025-10-12 20:04:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:04:15] ANSI_COLOR="0;31"
[2025-10-12 20:04:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:04:15] HOME_URL="https://www.centos.org/"
[2025-10-12 20:04:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:04:15] 
[2025-10-12 20:04:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:04:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:04:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:04:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:04:15] 
[2025-10-12 20:04:15] 2025-10-13 00:03:23,807 | INFO     | ***************************************
[2025-10-12 20:04:15] 2025-10-13 00:03:24,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 20:04:15] 2025-10-13 00:03:24,451 | INFO     | sufficient remaining disk space (127169200128 B)
[2025-10-12 20:04:15] 2025-10-13 00:03:24,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:04:15] 2025-10-13 00:03:24,452 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:04:15] 2025-10-13 00:03:24,452 | INFO     | update_server=False
[2025-10-12 20:04:15] 2025-10-13 00:03:24,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:04:15] 2025-10-13 00:03:24,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:04:15] 2025-10-13 00:03:24,460 | INFO     | aborting loop
[2025-10-12 20:04:15] 2025-10-13 00:03:24,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:04:15] 2025-10-13 00:03:25,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:04:15] 2025-10-13 00:03:25,204 | INFO     | all payload control threads have been joined
[2025-10-12 20:04:15] 2025-10-13 00:03:25,271 | INFO     | all data control threads have been joined
[2025-10-12 20:04:15] 2025-10-13 00:03:25,458 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,466 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,545 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:04:15] 2025-10-13 00:03:25,625 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,916 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:25,917 | INFO     | all job control threads have been joined
[2025-10-12 20:04:15] 2025-10-13 00:03:26,084 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,209 | INFO     | [payload] control thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,239 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,266 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,278 | INFO     | [data] control thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,468 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,738 | INFO     | [job] validate thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:26,924 | INFO     | [job] control thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:29,573 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:04:15] 2025-10-13 00:03:53,487 | INFO     | PID=1108336 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:04:15] 2025-10-13 00:03:53,488 | INFO     | .. there are 25 such processes running
[2025-10-12 20:04:15] 2025-10-13 00:03:53,488 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:04:15] 2025-10-13 00:03:53,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:04:15] 2025-10-13 00:03:53,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:04:15] 2025-10-13 00:04:08,704 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:04:15] 2025-10-13 00:04:09,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284615071552)>', '<ExcThread(monitor, started 140284251838208)>']
[2025-10-12 20:04:15] 2025-10-13 00:04:09,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:04:15] 2025-10-13 00:04:09,596 | INFO     | [monitor] control thread has ended
[2025-10-12 20:04:15] 2025-10-13 00:04:14,174 | INFO     | all workflow threads have been joined
[2025-10-12 20:04:15] 2025-10-13 00:04:14,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:04:15] 2025-10-13 00:04:14,175 | INFO     | traces error code: 0
[2025-10-12 20:04:15] 2025-10-13 00:04:14,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:04:15] 2025-10-13 00:04:14,698 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:04:15] 2025-10-13 00:04:14,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:04:15] 2025-10-13 00:04:14,719 [wrapper] pilotpid: 1108336
[2025-10-12 20:04:15] 2025-10-13 00:04:14,721 [wrapper] Pilot exit status: 0
[2025-10-12 20:04:15] 2025-10-13 00:04:14,745 [wrapper] pandaids: 6840390907
[2025-10-12 20:04:15] 2025-10-13 00:04:14,845 [wrapper] cleanup supervisor_pilot 1699528 1108337
[2025-10-12 20:04:15] 2025-10-13 00:04:14,849 [wrapper] Test setup, not cleaning
[2025-10-12 20:04:15] 2025-10-13 00:04:14,855 [wrapper] apfmon messages muted
[2025-10-12 20:04:15] 2025-10-13 00:04:14,861 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:04:15] 2025-10-13 00:04:14,864 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:04:15]  *** Error codes and diagnostics ***
[2025-10-12 20:04:15]     "exeErrorCode": 0,
[2025-10-12 20:04:15]     "exeErrorDiag": "",
[2025-10-12 20:04:15]     "pilotErrorCode": 0,
[2025-10-12 20:04:15]     "pilotErrorDiag": "",
[2025-10-12 20:04:15]  *** Listing of results directory ***
[2025-10-12 20:04:15] total 417080
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:34 queuedata.json
[2025-10-12 20:04:15] -rwx------. 1 boincer umatlas     36292 Oct 12 12:36 runpilot2-wrapper.sh
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:04:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:42 run_atlas
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:42 job.xml
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas 220378003 Oct 12 16:42 EVNT.46676267._004749.pool.root.1
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:42 input.tar.gz
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:42 start_atlas.sh
[2025-10-12 20:04:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:42 shared
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:42 boinc_lockfile
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:42 pandaJob.out
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas    975536 Oct 12 16:42 agis_schedconf.cvmfs.json
[2025-10-12 20:04:15] drwx------. 5 boincer umatlas      4096 Oct 12 16:42 pilot3
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas      6948 Oct 12 19:59 init_data.xml
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas 198836907 Oct 12 20:02 HITS.46676269._083679.pool.root.1
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:02 boinc_task_state.xml
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas      1048 Oct 12 20:02 memory_monitor_summary.json
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas    448757 Oct 12 20:03 log.46676269._083679.job.log.tgz.1
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas      7803 Oct 12 20:03 heartbeat.json
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas        95 Oct 12 20:03 pilot_heartbeat.json
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas      4825 Oct 12 20:04 pilotlog.txt
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:04 wrapper_checkpoint.txt
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas   1535844 Oct 12 20:04 log.46676269._083679.job.log.1
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:04 boinc_mmap_file
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas       357 Oct 12 20:04 output.list
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:04 runtime_log
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas   2007040 Oct 12 20:04 result.tar.gz
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 20:04 runtime_log.err
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas       659 Oct 12 20:04 IZcLDmTEES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmogkNDmc1eBTo.diag
[2025-10-12 20:04:15] -rw-r--r--. 1 boincer umatlas     20966 Oct 12 20:04 stderr.txt
[2025-10-12 20:04:15] HITS file was successfully produced:
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas 198836907 Oct 12 20:02 shared/HITS.pool.root.1
[2025-10-12 20:04:15]  *** Contents of shared directory: ***
[2025-10-12 20:04:15] total 411936
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas 220378003 Oct 12 16:42 ATLAS.root_0
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 16:42 input.tar.gz
[2025-10-12 20:04:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:42 start_atlas.sh
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas 198836907 Oct 12 20:02 HITS.pool.root.1
[2025-10-12 20:04:15] -rw-------. 1 boincer umatlas   2007040 Oct 12 20:04 result.tar.gz
20:04:16 (1104673): run_atlas exited; CPU time 37168.963512
20:04:16 (1104673): called boinc_finish(0)

</stderr_txt>
]]>

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