Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:17 (1334103): wrapper (7.7.26015): starting
13:21:17 (1334103): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:21:17] Arguments: --nthreads 8
[2025-10-12 13:21:17] Threads: 8
[2025-10-12 13:21:17] Checking for CVMFS
[2025-10-12 13:21:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:21:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:21:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:21:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:21:19] 2.11.3.0 2018 31920 207896 151636 2 256 25976730 45568000 9301 130560 0 192118402 99.862 76142254 14585 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 13:21:19] CVMFS is ok
[2025-10-12 13:21:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:21:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:21:19] Further information can be found at the LHC@home message board.
[2025-10-12 13:21:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:21:19] Checking for apptainer binary...
[2025-10-12 13:21:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:21:19] Running /usr/bin/apptainer --version
[2025-10-12 13:21:19] apptainer version 1.4.1-1.el9
[2025-10-12 13:21:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:21:20] wns0002.triumf.lcg
[2025-10-12 13:21:20] apptainer works
[2025-10-12 13:21:20] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:21:20] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:21:20] Starting ATLAS job with PandaID=6840537544
[2025-10-12 13:21:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:28:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | . Timing measurements:
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . get job = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . initial setup = 7 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload setup = 33 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload execution = 101 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-out = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . log creation = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840537544/pilotlog.txt
[2025-10-12 13:28:16] 2025-10-12 20:27:33,063 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 13:28:16] - Log from pilotlog.txt -
[2025-10-12 13:28:16] 2025-10-12 20:27:32,944 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840537544/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,944 | INFO     | extracted standard info from prmon json
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | WARNING  | wrong length of table data, x=[1760300628.0, 1760300689.0], y=[1075.0, 545955.0] (must be same and length>=4)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | . Timing measurements:
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . get job = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . initial setup = 7 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload setup = 33 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload execution = 101 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-out = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . log creation = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840537544/pilotlog.txt
[2025-10-12 13:28:16] 2025-10-12 20:27:33,063 | WARNING  | 
[2025-10-12 13:28:16] [begin log extracts]
[2025-10-12 13:28:16] - Log from pilotlog.txt -
[2025-10-12 13:28:16] 2025-10-12 20:27:32,944 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840537544/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,944 | INFO     | extracted standard info from prmon json
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:28:16] 2025-10-12 20:27:32,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | WARNING  | wrong length of table data, x=[1760300628.0, 1760300689.0], y=[1075.0, 545955.0] (must be same and length>=4)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,952 | INFO     | . Timing measurements:
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . get job = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . initial setup = 7 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload setup = 33 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-in = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . payload execution = 101 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . stage-out = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | . log creation = 0 s
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | ..............................
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 13:28:16] 2025-10-12 20:27:32,953 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840537544/pilotlog.txt
[2025-10-12 13:28:16] [end log extracts]
[2025-10-12 13:28:16] 2025-10-12 20:27:33,063 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 13:28:16] 2025-10-12 20:27:33,066 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 13:28:16] 2025-10-12 20:27:33,994 | INFO     | PID=1337891 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:28:16] 2025-10-12 20:27:33,994 | INFO     | .. there are 33 such processes running
[2025-10-12 13:28:16] 2025-10-12 20:27:34,052 | INFO     | 
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | job summary report
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | --------------------------------------------------
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | PanDA job id: 6840537544
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | task id: 46676269
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 13:24:59,543 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:28:16] 2025-10-12 20:27:34,059 | INFO     | pilot state: failed 
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | transexitcode: 65
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | exeerrorcode: 65
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | exitcode: 65
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | nevents: 0
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | neventsw: 0
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | pid: 1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | pgrp: 1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | corecount: 8
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | event service: False
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 3: 2348910, 14: 2348938, 24: 2349384, 138: 2372662, 139: 2372638, 141: 2376986, 282: 2377124}
[2025-10-12 13:28:16] 2025-10-12 20:27:34,060 | INFO     | --------------------------------------------------
[2025-10-12 13:28:16] 2025-10-12 20:27:34,061 | INFO     | 
[2025-10-12 13:28:16] 2025-10-12 20:27:34,061 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 13:28:16] 2025-10-12 20:27:34,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:28:16] 2025-10-12 20:27:34,145 | INFO     | job 6840537544 has completed (purged errors)
[2025-10-12 13:28:16] 2025-10-12 20:27:34,146 | INFO     | overall cleanup function is called
[2025-10-12 13:28:16] 2025-10-12 20:27:35,153 | INFO     | --- collectZombieJob: --- 10, [1352658]
[2025-10-12 13:28:16] 2025-10-12 20:27:35,153 | INFO     | zombie collector waiting for pid 1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:35,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:28:16] 2025-10-12 20:27:35,153 | INFO     | collected zombie processes
[2025-10-12 13:28:16] 2025-10-12 20:27:35,153 | INFO     | will attempt to kill all subprocesses of pid=1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:35,644 | INFO     | process IDs to be killed: [1352658] (in reverse order)
[2025-10-12 13:28:16] 2025-10-12 20:27:35,723 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:28:16] 2025-10-12 20:27:35,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:28:16] 2025-10-12 20:27:35,741 | INFO     | did not find any defunct processes belonging to 1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:35,764 | INFO     | did not find any defunct processes belonging to 1352658
[2025-10-12 13:28:16] 2025-10-12 20:27:35,764 | INFO     | ready for new job
[2025-10-12 13:28:16] 2025-10-12 20:27:35,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:28:16] 2025-10-12 20:27:35,765 | INFO     | ***************************************
[2025-10-12 13:28:16] 2025-10-12 20:27:35,765 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:28:16] 2025-10-12 20:27:35,765 | INFO     | ***************************************
[2025-10-12 13:28:16] 2025-10-12 20:27:35,765 | INFO     | 
[2025-10-12 13:28:16] 2025-10-12 20:27:35,772 | INFO     | architecture information:
[2025-10-12 13:28:16] 2025-10-12 20:27:35,780 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:28:16] 2025-10-12 20:27:35,831 | INFO     | cat /etc/os-release:
[2025-10-12 13:28:16] NAME="CentOS Linux"
[2025-10-12 13:28:16] VERSION="7 (Core)"
[2025-10-12 13:28:16] ID="centos"
[2025-10-12 13:28:16] ID_LIKE="rhel fedora"
[2025-10-12 13:28:16] VERSION_ID="7"
[2025-10-12 13:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:28:16] ANSI_COLOR="0;31"
[2025-10-12 13:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:28:16] HOME_URL="https://www.centos.org/"
[2025-10-12 13:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:28:16] 
[2025-10-12 13:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:28:16] 
[2025-10-12 13:28:16] 2025-10-12 20:27:35,831 | INFO     | ***************************************
[2025-10-12 13:28:16] 2025-10-12 20:27:36,335 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 13:28:16] 2025-10-12 20:27:36,400 | INFO     | sufficient remaining disk space (1325429424128 B)
[2025-10-12 13:28:16] 2025-10-12 20:27:36,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:28:16] 2025-10-12 20:27:36,400 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:28:16] 2025-10-12 20:27:36,400 | INFO     | update_server=False
[2025-10-12 13:28:16] 2025-10-12 20:27:36,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:28:16] 2025-10-12 20:27:36,659 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:28:16] 2025-10-12 20:27:36,659 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:28:16] 2025-10-12 20:27:36,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:16] 2025-10-12 20:27:36,659 | INFO     | will abort loop
[2025-10-12 13:28:16] 2025-10-12 20:27:36,701 | INFO     | all data control threads have been joined
[2025-10-12 13:28:16] 2025-10-12 20:27:36,852 | INFO     | all payload control threads have been joined
[2025-10-12 13:28:16] 2025-10-12 20:27:37,164 | INFO     | all job control threads have been joined
[2025-10-12 13:28:16] 2025-10-12 20:27:37,406 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,589 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,673 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,707 | INFO     | [data] control thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:28:16] 2025-10-12 20:27:37,854 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,858 | INFO     | [payload] control thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:37,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:28:16] 2025-10-12 20:27:38,071 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,099 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,169 | INFO     | [job] control thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,319 | INFO     | [job] validate thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,334 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,576 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:38,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:28:16] 2025-10-12 20:27:39,673 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:39,814 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:27:42,063 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:28:16] 2025-10-12 20:28:07,095 | INFO     | PID=1337891 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:28:16] 2025-10-12 20:28:07,100 | INFO     | .. there are 33 such processes running
[2025-10-12 13:28:16] 2025-10-12 20:28:07,100 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:28:16] 2025-10-12 20:28:07,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:28:16] 2025-10-12 20:28:07,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:28:16] 2025-10-12 20:28:08,786 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:28:16] 2025-10-12 20:28:10,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566464841536)>', '<ExcThread(monitor, started 140565907740416)>']
[2025-10-12 13:28:16] 2025-10-12 20:28:11,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:28:16] 2025-10-12 20:28:11,152 | INFO     | [monitor] control thread has ended
[2025-10-12 13:28:16] 2025-10-12 20:28:15,498 | INFO     | all workflow threads have been joined
[2025-10-12 13:28:16] 2025-10-12 20:28:15,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:28:16] 2025-10-12 20:28:15,498 | INFO     | traces error code: 0
[2025-10-12 13:28:16] 2025-10-12 20:28:15,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:28:16] 2025-10-12 20:28:15,894 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:28:16] 2025-10-12 20:28:15,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:28:16] 2025-10-12 20:28:15,933 [wrapper] pilotpid: 1337891
[2025-10-12 13:28:16] 2025-10-12 20:28:15,961 [wrapper] Pilot exit status: 0
[2025-10-12 13:28:16] 2025-10-12 20:28:16,049 [wrapper] pandaids: 6840537544
[2025-10-12 13:28:16] 2025-10-12 20:28:16,146 [wrapper] cleanup supervisor_pilot 1337897 1337892
[2025-10-12 13:28:16] 2025-10-12 20:28:16,153 [wrapper] Test setup, not cleaning
[2025-10-12 13:28:16] 2025-10-12 20:28:16,160 [wrapper] apfmon messages muted
[2025-10-12 13:28:16] 2025-10-12 20:28:16,175 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:28:16] 2025-10-12 20:28:16,183 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:28:16]  *** Error codes and diagnostics ***
[2025-10-12 13:28:16]     "exeErrorCode": 65,
[2025-10-12 13:28:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 13:28:16]     "pilotErrorCode": 1305,
[2025-10-12 13:28:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 13:28:16]  *** Listing of results directory ***
[2025-10-12 13:28:16] total 219260
[2025-10-12 13:28:16] -rwx------. 1 boinc boinc     36292 Oct 12 11:53 runpilot2-wrapper.sh
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 11:53 queuedata.json
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:53 pilot3.tar.gz
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc       100 Oct 12 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:28:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 13:21 run_atlas
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc       105 Oct 12 13:21 job.xml
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc 220369115 Oct 12 13:21 EVNT.46676267._004427.pool.root.1
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc      6443 Oct 12 13:21 init_data.xml
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 13:28:16] drwxrwx--x. 2 boinc boinc      4096 Oct 12 13:21 shared
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc    569677 Oct 12 13:21 input.tar.gz
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc         0 Oct 12 13:21 boinc_lockfile
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc      2550 Oct 12 13:21 pandaJob.out
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc    975536 Oct 12 13:22 agis_schedconf.cvmfs.json
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc   1560580 Oct 12 13:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:28:16] drwx------. 5 boinc boinc      4096 Oct 12 13:22 pilot3
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc       525 Oct 12 13:24 boinc_task_state.xml
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc      1009 Oct 12 13:25 memory_monitor_summary.json
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc     22926 Oct 12 13:25 log.46676269._086691.job.log.tgz.1
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc      8428 Oct 12 13:27 heartbeat.json
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc        95 Oct 12 13:28 pilot_heartbeat.json
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc      8192 Oct 12 13:28 boinc_mmap_file
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc        23 Oct 12 13:28 wrapper_checkpoint.txt
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc      5009 Oct 12 13:28 pilotlog.txt
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc    100194 Oct 12 13:28 log.46676269._086691.job.log.1
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc       188 Oct 12 13:28 output.list
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc       620 Oct 12 13:28 runtime_log
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc    143360 Oct 12 13:28 result.tar.gz
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc      8526 Oct 12 13:28 runtime_log.err
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc       646 Oct 12 13:28 13mKDmyMGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEjUMDmSKtwNo.diag
[2025-10-12 13:28:16] -rw-r--r--. 1 boinc boinc     21966 Oct 12 13:28 stderr.txt
[2025-10-12 13:28:16] No HITS result produced
[2025-10-12 13:28:16]  *** Contents of shared directory: ***
[2025-10-12 13:28:16] total 215928
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc 220369115 Oct 12 13:21 ATLAS.root_0
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 13:28:16] -rw-r--r--. 2 boinc boinc    569677 Oct 12 13:21 input.tar.gz
[2025-10-12 13:28:16] -rw-------. 1 boinc boinc    143360 Oct 12 13:28 result.tar.gz
13:28:17 (1334103): run_atlas exited; CPU time 31.095671
13:28:17 (1334103): called boinc_finish(0)

</stderr_txt>
]]>

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