Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:18:43 (876225): wrapper (7.7.26015): starting
16:18:43 (876225): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 16:18:43] Arguments: --nthreads 11
[2025-10-12 16:18:43] Threads: 11
[2025-10-12 16:18:43] Checking for CVMFS
[2025-10-12 16:18:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:18:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:18:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:18:45] 2.13.2.0 112940 138582 394736 151636 1 126 29469630 40960000 54480 16776704 0 421149839 99.823 197859191 31264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:18:45] CVMFS is ok
[2025-10-12 16:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:18:45] Further information can be found at the LHC@home message board.
[2025-10-12 16:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:18:45] Checking for apptainer binary...
[2025-10-12 16:18:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:18:45] Running /usr/bin/apptainer --version
[2025-10-12 16:18:45] apptainer version 1.4.3-1.el9
[2025-10-12 16:18:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:18:46] c8-7-3.aglt2.org
[2025-10-12 16:18:46] apptainer works
[2025-10-12 16:18:46] Set ATHENA_PROC_NUMBER=11
[2025-10-12 16:18:46] Set ATHENA_CORE_NUMBER=11
[2025-10-12 16:18:46] Starting ATLAS job with PandaID=6840537496
[2025-10-12 16:18:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:48:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:48:18] 2025-10-12 21:45:15,195 | INFO     | monitor loop #325: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:15,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:16,390 | INFO     | time since job start (5104s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:17,704 | INFO     | monitor loop #326: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:17,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:18,397 | INFO     | time since job start (5106s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:20,209 | INFO     | monitor loop #327: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:20,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:20,408 | INFO     | time since job start (5108s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:22,418 | INFO     | time since job start (5110s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:22,716 | INFO     | monitor loop #328: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:22,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:24,425 | INFO     | time since job start (5112s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:25,244 | INFO     | monitor loop #329: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:25,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:26,432 | INFO     | time since job start (5114s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:27,751 | INFO     | monitor loop #330: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:27,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:28,443 | INFO     | time since job start (5116s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:30,256 | INFO     | monitor loop #331: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:30,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:30,450 | INFO     | time since job start (5118s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:32,457 | INFO     | time since job start (5120s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:32,762 | INFO     | monitor loop #332: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:32,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:34,464 | INFO     | time since job start (5122s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:35,276 | INFO     | monitor loop #333: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:35,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:36,882 | INFO     | PID=893803 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:48:18] 2025-10-12 21:45:36,883 | INFO     | .. there are 59 such processes running
[2025-10-12 17:48:18] 2025-10-12 21:45:37,765 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 17:48:18] 2025-10-12 21:45:37,784 | INFO     | monitor loop #334: job 0:6840537496 is in state 'finished'
[2025-10-12 17:48:18] 2025-10-12 21:45:37,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,791 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.992554687505
[2025-10-12 17:48:18] 2025-10-12 21:45:37,803 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840537496/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,803 | INFO     | extracted standard info from prmon json
[2025-10-12 17:48:18] 2025-10-12 21:45:37,803 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:48:18] 2025-10-12 21:45:37,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:48:18] 2025-10-12 21:45:37,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:48:18] 2025-10-12 21:45:37,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | sum of square deviations: 125628618.37837836
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | sum of deviations: 2857509374.3513575
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | mean x: 1760303098.5405405
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | mean y: 2366994.7162162163
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | -- intersect: -40036938306.1614
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | intersect: -40036938306.1614
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | chi2: 0.6180883063266859
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | -- intersect: -40036938306.1614
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | current memory leak: 22.75 B/s (using 74 data points, chi2=0.62)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,805 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | ..............................
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . Timing measurements:
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . get job = 0 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . initial setup = 9 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . payload setup = 42 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . stage-in = 0 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . payload execution = 4934 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . stage-out = 1 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | . log creation = 0 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,806 | INFO     | ..............................
[2025-10-12 17:48:18] 2025-10-12 21:45:37,894 | INFO     | time since job start (5125s) is within the limit (172800.0s)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,895 | INFO     | 
[2025-10-12 17:48:18] 2025-10-12 21:45:37,895 | INFO     | job summary report
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | --------------------------------------------------
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | PanDA job id: 6840537496
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | task id: 46676269
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | errors: (none)
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | pilot state: finished 
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | transexitcode: 0
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | exeerrorcode: 0
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | exeerrordiag: 
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | exitcode: 0
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | exitmsg: OK
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | cpuconsumptiontime: 22935 s
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | nevents: 400
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | neventsw: 0
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | pid: 940756
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | pgrp: 940756
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | corecount: 11
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | event service: False
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 22: 2348913, 33: 2348913, 34: 2349231, 44: 2349387, 4981: 2375605, 4983: 2384603, 4987: 2384659, 5045: 2384853}
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | --------------------------------------------------
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | 
[2025-10-12 17:48:18] 2025-10-12 21:45:37,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 17:48:18] 2025-10-12 21:45:38,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | job 6840537496 has completed (purged errors)
[2025-10-12 17:48:18] 2025-10-12 21:45:38,397 | INFO     | overall cleanup function is called
[2025-10-12 17:48:18] 2025-10-12 21:45:39,405 | INFO     | --- collectZombieJob: --- 10, [940756]
[2025-10-12 17:48:18] 2025-10-12 21:45:39,405 | INFO     | zombie collector waiting for pid 940756
[2025-10-12 17:48:18] 2025-10-12 21:45:39,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:48:18] 2025-10-12 21:45:39,405 | INFO     | collected zombie processes
[2025-10-12 17:48:18] 2025-10-12 21:45:39,405 | INFO     | will attempt to kill all subprocesses of pid=940756
[2025-10-12 17:48:18] 2025-10-12 21:45:40,791 | INFO     | process IDs to be killed: [940756] (in reverse order)
[2025-10-12 17:48:18] 2025-10-12 21:45:41,636 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:48:18] 2025-10-12 21:45:41,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:48:18] 2025-10-12 21:45:41,673 | INFO     | did not find any defunct processes belonging to 940756
[2025-10-12 17:48:18] 2025-10-12 21:45:41,717 | INFO     | did not find any defunct processes belonging to 940756
[2025-10-12 17:48:18] 2025-10-12 21:45:41,717 | INFO     | ready for new job
[2025-10-12 17:48:18] 2025-10-12 21:45:41,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:48:18] 2025-10-12 21:45:41,718 | INFO     | ***************************************
[2025-10-12 17:48:18] 2025-10-12 21:45:41,718 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:48:18] 2025-10-12 21:45:41,718 | INFO     | ***************************************
[2025-10-12 17:48:18] 2025-10-12 21:45:41,718 | INFO     | 
[2025-10-12 17:48:18] 2025-10-12 21:45:41,732 | INFO     | architecture information:
[2025-10-12 17:48:18] 2025-10-12 21:45:41,744 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:48:18] 2025-10-12 21:45:41,862 | INFO     | cat /etc/os-release:
[2025-10-12 17:48:18] NAME="CentOS Linux"
[2025-10-12 17:48:18] VERSION="7 (Core)"
[2025-10-12 17:48:18] ID="centos"
[2025-10-12 17:48:18] ID_LIKE="rhel fedora"
[2025-10-12 17:48:18] VERSION_ID="7"
[2025-10-12 17:48:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:48:18] ANSI_COLOR="0;31"
[2025-10-12 17:48:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:48:18] HOME_URL="https://www.centos.org/"
[2025-10-12 17:48:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:48:18] 
[2025-10-12 17:48:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:48:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:48:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:48:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:48:18] 
[2025-10-12 17:48:18] 2025-10-12 21:45:41,862 | INFO     | ***************************************
[2025-10-12 17:48:18] 2025-10-12 21:45:42,366 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 17:48:18] 2025-10-12 21:45:42,521 | INFO     | sufficient remaining disk space (169860923392 B)
[2025-10-12 17:48:18] 2025-10-12 21:45:42,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:48:18] 2025-10-12 21:45:42,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:48:18] 2025-10-12 21:45:42,522 | INFO     | update_server=False
[2025-10-12 17:48:18] 2025-10-12 21:45:42,522 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:48:18] 2025-10-12 21:45:42,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:48:18] 2025-10-12 21:45:42,816 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:48:18] 2025-10-12 21:45:42,816 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:48:18] 2025-10-12 21:45:42,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:48:18] 2025-10-12 21:45:42,817 | INFO     | will abort loop
[2025-10-12 17:48:18] 2025-10-12 21:45:42,868 | INFO     | all data control threads have been joined
[2025-10-12 17:48:18] 2025-10-12 21:45:42,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:48:18] 2025-10-12 21:45:42,968 | INFO     | all payload control threads have been joined
[2025-10-12 17:48:18] 2025-10-12 21:45:43,529 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:43,692 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:43,828 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:43,875 | INFO     | [data] control thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:43,949 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:43,974 | INFO     | [payload] control thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,206 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,230 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,230 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,273 | INFO     | all job control threads have been joined
[2025-10-12 17:48:18] 2025-10-12 21:45:44,428 | INFO     | [job] validate thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,529 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,612 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:44,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:48:18] 2025-10-12 21:45:44,828 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:45,278 | INFO     | [job] control thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:48,697 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:45:52,834 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:48:18] 2025-10-12 21:45:53,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:48:18] 2025-10-12 21:46:13,944 | INFO     | PID=893803 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:48:18] 2025-10-12 21:46:13,944 | INFO     | .. there are 58 such processes running
[2025-10-12 17:48:18] 2025-10-12 21:46:13,947 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:48:18] 2025-10-12 21:46:13,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:48:18] 2025-10-12 21:46:13,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:48:18] 2025-10-12 21:46:20,758 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:48:18] 2025-10-12 21:46:21,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522818438976)>', '<ExcThread(monitor, started 140522169546496)>']
[2025-10-12 17:48:18] 2025-10-12 21:46:22,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:48:18] 2025-10-12 21:46:22,012 | INFO     | [monitor] control thread has ended
[2025-10-12 17:48:18] 2025-10-12 21:46:26,548 | INFO     | all workflow threads have been joined
[2025-10-12 17:48:18] 2025-10-12 21:46:26,548 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:48:18] 2025-10-12 21:46:26,548 | INFO     | traces error code: 0
[2025-10-12 17:48:18] 2025-10-12 21:46:26,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:48:18] 2025-10-12 21:46:27,045 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:48:18] 2025-10-12 21:46:27,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:48:18] 2025-10-12 21:46:27,123 [wrapper] pilotpid: 893803
[2025-10-12 17:48:18] 2025-10-12 21:46:27,127 [wrapper] Pilot exit status: 0
[2025-10-12 17:48:18] 2025-10-12 21:46:27,251 [wrapper] pandaids: 6840537496
[2025-10-12 17:48:18] 2025-10-12 21:46:27,772 [wrapper] cleanup supervisor_pilot 1784175 893804
[2025-10-12 17:48:18] 2025-10-12 21:46:27,827 [wrapper] Test setup, not cleaning
[2025-10-12 17:48:18] 2025-10-12 21:46:27,885 [wrapper] apfmon messages muted
[2025-10-12 17:48:18] 2025-10-12 21:46:27,907 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:48:18] 2025-10-12 21:46:27,927 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:48:18]  *** Error codes and diagnostics ***
[2025-10-12 17:48:18]     "exeErrorCode": 0,
[2025-10-12 17:48:18]     "exeErrorDiag": "",
[2025-10-12 17:48:18]     "pilotErrorCode": 0,
[2025-10-12 17:48:18]     "pilotErrorDiag": "",
[2025-10-12 17:48:18]  *** Listing of results directory ***
[2025-10-12 17:48:18] total 407948
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:50 pilot3.tar.gz
[2025-10-12 17:48:18] -rwx------. 1 boincer umatlas     36292 Oct 12 14:51 runpilot2-wrapper.sh
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:51 queuedata.json
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:48:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:18 run_atlas
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:18 job.xml
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas 221867034 Oct 12 16:18 EVNT.46676267._004425.pool.root.1
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:18 start_atlas.sh
[2025-10-12 17:48:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:18 shared
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 16:18 input.tar.gz
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:18 boinc_lockfile
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:18 pandaJob.out
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas    975536 Oct 12 16:20 agis_schedconf.cvmfs.json
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:48:18] drwx------. 5 boincer umatlas      4096 Oct 12 16:20 pilot3
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas 189905989 Oct 12 17:43 HITS.46676269._086643.pool.root.1
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas       529 Oct 12 17:43 boinc_task_state.xml
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas      1047 Oct 12 17:44 memory_monitor_summary.json
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas    376822 Oct 12 17:44 log.46676269._086643.job.log.tgz.1
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas      7806 Oct 12 17:45 heartbeat.json
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas        95 Oct 12 17:46 pilot_heartbeat.json
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas      5082 Oct 12 17:46 pilotlog.txt
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas    654823 Oct 12 17:46 log.46676269._086643.job.log.1
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas       357 Oct 12 17:46 output.list
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:46 runtime_log
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas   1054720 Oct 12 17:46 result.tar.gz
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 17:46 runtime_log.err
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas       654 Oct 12 17:46 AzCMDmXLGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhiUMDmHEjG1n.diag
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas      7162 Oct 12 17:48 init_data.xml
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:48 boinc_mmap_file
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:48 wrapper_checkpoint.txt
[2025-10-12 17:48:18] -rw-r--r--. 1 boincer umatlas     22316 Oct 12 17:48 stderr.txt
[2025-10-12 17:48:18] HITS file was successfully produced:
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas 189905989 Oct 12 17:43 shared/HITS.pool.root.1
[2025-10-12 17:48:18]  *** Contents of shared directory: ***
[2025-10-12 17:48:18] total 403736
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas 221867034 Oct 12 16:18 ATLAS.root_0
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:18 start_atlas.sh
[2025-10-12 17:48:18] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 16:18 input.tar.gz
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas 189905989 Oct 12 17:43 HITS.pool.root.1
[2025-10-12 17:48:18] -rw-------. 1 boincer umatlas   1054720 Oct 12 17:46 result.tar.gz
17:48:20 (876225): run_atlas exited; CPU time 23104.291459
17:48:20 (876225): called boinc_finish(0)

</stderr_txt>
]]>

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