Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:23:37 (2129671): wrapper (7.7.26015): starting
16:23:37 (2129671): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 16:23:37] Arguments: --nthreads 4
[2025-10-12 16:23:37] Threads: 4
[2025-10-12 16:23:37] Checking for CVMFS
[2025-10-12 16:23:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:23:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:23:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:23:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:23:38] 2.13.2.0 3732220 7049 59996 151636 3 188 2692914 4096000 13696 130560 0 49100780 99.999 373069 1287 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 16:23:38] CVMFS is ok
[2025-10-12 16:23:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:23:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 16:23:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 16:23:38] Further information can be found at the LHC@home message board.
[2025-10-12 16:23:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:23:38] Checking for apptainer binary...
[2025-10-12 16:23:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:23:38] Running /usr/bin/apptainer --version
[2025-10-12 16:23:38] apptainer version 1.4.3
[2025-10-12 16:23:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:23:38] T7810-Ubuntu
[2025-10-12 16:23:38] apptainer works
[2025-10-12 16:23:38] Set ATHENA_PROC_NUMBER=4
[2025-10-12 16:23:38] Set ATHENA_CORE_NUMBER=4
[2025-10-12 16:23:38] Starting ATLAS job with PandaID=6840223521
[2025-10-12 16:23:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:56:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:56:19] 2025-10-12 23:55:45,428 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:56:19] 2025-10-12 23:55:45,441 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2783.8950874999996
[2025-10-12 19:56:19] 2025-10-12 23:55:45,453 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/21/PanDA_Pilot-6840223521/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,454 | INFO     | extracted standard info from prmon json
[2025-10-12 19:56:19] 2025-10-12 23:55:45,454 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:56:19] 2025-10-12 23:55:45,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:56:19] 2025-10-12 23:55:45,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:56:19] 2025-10-12 23:55:45,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:56:19] 2025-10-12 23:55:45,459 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:56:19] 2025-10-12 23:55:45,460 | INFO     | sum of square deviations: 2790348132.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,461 | INFO     | sum of deviations: 15546397474.999992
[2025-10-12 19:56:19] 2025-10-12 23:55:45,461 | INFO     | mean x: 1760306973.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,462 | INFO     | mean y: 2305666.0865384615
[2025-10-12 19:56:19] 2025-10-12 23:55:45,462 | INFO     | -- intersect: -9805227513.807474
[2025-10-12 19:56:19] 2025-10-12 23:55:45,462 | INFO     | intersect: -9805227513.807474
[2025-10-12 19:56:19] 2025-10-12 23:55:45,462 | INFO     | chi2: 1.4236755948890076
[2025-10-12 19:56:19] 2025-10-12 23:55:45,463 | INFO     | sum of square deviations: 2593916542.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,464 | INFO     | sum of deviations: 15238354672.999998
[2025-10-12 19:56:19] 2025-10-12 23:55:45,464 | INFO     | mean x: 1760306821.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,464 | INFO     | mean y: 2305426.9310344825
[2025-10-12 19:56:19] 2025-10-12 23:55:45,464 | INFO     | -- intersect: -10338882979.622997
[2025-10-12 19:56:19] 2025-10-12 23:55:45,465 | INFO     | intersect: -10338882979.622997
[2025-10-12 19:56:19] 2025-10-12 23:55:45,465 | INFO     | chi2: 1.4245295122920398
[2025-10-12 19:56:19] 2025-10-12 23:55:45,465 | INFO     | current chi2=1.4245295122920398 (change=-0.05997977391041626 %)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,465 | INFO     | right removable region: 202
[2025-10-12 19:56:19] 2025-10-12 23:55:45,466 | INFO     | sum of square deviations: 2593916542.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,467 | INFO     | sum of deviations: -11844494928.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,467 | INFO     | mean x: 1760307126.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,467 | INFO     | mean y: 2326666.0197044336
[2025-10-12 19:56:19] 2025-10-12 23:55:45,467 | INFO     | -- intersect: 8040345040.178042
[2025-10-12 19:56:19] 2025-10-12 23:55:45,467 | INFO     | intersect: 8040345040.178042
[2025-10-12 19:56:19] 2025-10-12 23:55:45,468 | INFO     | chi2: 0.013349164430091827
[2025-10-12 19:56:19] 2025-10-12 23:55:45,468 | INFO     | current chi2=0.013349164430091827 (change=99.06234506807483 %)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,468 | INFO     | sum of square deviations: 2406926989.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,470 | INFO     | sum of deviations: -10720643341.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,470 | INFO     | mean x: 1760307278.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,470 | INFO     | mean y: 2325751.8434343436
[2025-10-12 19:56:19] 2025-10-12 23:55:45,470 | INFO     | -- intersect: 7842873714.690153
[2025-10-12 19:56:19] 2025-10-12 23:55:45,470 | INFO     | intersect: 7842873714.690153
[2025-10-12 19:56:19] 2025-10-12 23:55:45,471 | INFO     | chi2: 0.011625654797321935
[2025-10-12 19:56:19] 2025-10-12 23:55:45,471 | INFO     | current chi2=0.011625654797321935 (change=12.91099260778254 %)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,471 | INFO     | left removable region: 20
[2025-10-12 19:56:19] 2025-10-12 23:55:45,471 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,472 | INFO     | sum of deviations: -8807700025.0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,472 | INFO     | mean x: 1760307400.5
[2025-10-12 19:56:19] 2025-10-12 23:55:45,473 | INFO     | mean y: 2324629.901098901
[2025-10-12 19:56:19] 2025-10-12 23:55:45,473 | INFO     | -- intersect: 8296468285.602998
[2025-10-12 19:56:19] 2025-10-12 23:55:45,473 | INFO     | intersect: 8296468285.602998
[2025-10-12 19:56:19] 2025-10-12 23:55:45,473 | INFO     | chi2: 0.011234604978057103
[2025-10-12 19:56:19] 2025-10-12 23:55:45,473 | INFO     | -- intersect: 8296468285.602998
[2025-10-12 19:56:19] 2025-10-12 23:55:45,474 | INFO     | current memory leak: -4.71 B/s (using 182 data points, chi2=0.01)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,474 | INFO     | could have reported an average CPU frequency of 2646 MHz (11 samples)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,474 | INFO     | ..............................
[2025-10-12 19:56:19] 2025-10-12 23:55:45,474 | INFO     | . Timing measurements:
[2025-10-12 19:56:19] 2025-10-12 23:55:45,474 | INFO     | . get job = 0 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . initial setup = 3 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . payload setup = 6 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . stage-in = 0 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . payload execution = 12672 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . stage-out = 2 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | . log creation = 0 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,475 | INFO     | ..............................
[2025-10-12 19:56:19] 2025-10-12 23:55:45,565 | INFO     | 
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | job summary report
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | --------------------------------------------------
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | PanDA job id: 6840223521
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | task id: 46676269
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | errors: (none)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | pilot state: finished 
[2025-10-12 19:56:19] 2025-10-12 23:55:45,566 | INFO     | transexitcode: 0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | exeerrorcode: 0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | exeerrordiag: 
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | exitcode: 0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | exitmsg: OK
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | cpuconsumptiontime: 49357 s
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | nevents: 400
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | neventsw: 0
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | pid: 2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:45,567 | INFO     | pgrp: 2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | corecount: 4
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | event service: False
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | sizes: {0: 2348701, 1: 2348900, 6: 2349162, 12: 2349190, 12682: 2379079, 12687: 2388107, 12690: 2388291, 12697: 2388485}
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | --------------------------------------------------
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | 
[2025-10-12 19:56:19] 2025-10-12 23:55:45,568 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2025-10-12 19:56:19] 2025-10-12 23:55:45,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:56:19] 2025-10-12 23:55:45,594 | INFO     | job 6840223521 has completed (purged errors)
[2025-10-12 19:56:19] 2025-10-12 23:55:45,594 | INFO     | overall cleanup function is called
[2025-10-12 19:56:19] 2025-10-12 23:55:46,263 | INFO     | PID=2133705 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 19:56:19] 2025-10-12 23:55:46,263 | INFO     | .. there are 16 such processes running
[2025-10-12 19:56:19] 2025-10-12 23:55:46,603 | INFO     | --- collectZombieJob: --- 10, [2142856]
[2025-10-12 19:56:19] 2025-10-12 23:55:46,603 | INFO     | zombie collector waiting for pid 2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:46,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:56:19] 2025-10-12 23:55:46,603 | INFO     | collected zombie processes
[2025-10-12 19:56:19] 2025-10-12 23:55:46,604 | INFO     | will attempt to kill all subprocesses of pid=2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:47,060 | INFO     | process IDs to be killed: [2142856] (in reverse order)
[2025-10-12 19:56:19] 2025-10-12 23:55:47,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:56:19] 2025-10-12 23:55:47,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:56:19] 2025-10-12 23:55:47,196 | INFO     | did not find any defunct processes belonging to 2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:47,206 | INFO     | did not find any defunct processes belonging to 2142856
[2025-10-12 19:56:19] 2025-10-12 23:55:47,214 | INFO     | ready for new job
[2025-10-12 19:56:19] 2025-10-12 23:55:47,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:56:19] 2025-10-12 23:55:47,216 | INFO     | ***************************************
[2025-10-12 19:56:19] 2025-10-12 23:55:47,216 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:56:19] 2025-10-12 23:55:47,216 | INFO     | ***************************************
[2025-10-12 19:56:19] 2025-10-12 23:55:47,216 | INFO     | 
[2025-10-12 19:56:19] 2025-10-12 23:55:47,220 | INFO     | architecture information:
[2025-10-12 19:56:19] 2025-10-12 23:55:47,220 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:56:19] 2025-10-12 23:55:47,234 | INFO     | cat /etc/os-release:
[2025-10-12 19:56:19] NAME="CentOS Linux"
[2025-10-12 19:56:19] VERSION="7 (Core)"
[2025-10-12 19:56:19] ID="centos"
[2025-10-12 19:56:19] ID_LIKE="rhel fedora"
[2025-10-12 19:56:19] VERSION_ID="7"
[2025-10-12 19:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:56:19] ANSI_COLOR="0;31"
[2025-10-12 19:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:56:19] HOME_URL="https://www.centos.org/"
[2025-10-12 19:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:56:19] 
[2025-10-12 19:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:56:19] 
[2025-10-12 19:56:19] 2025-10-12 23:55:47,234 | INFO     | ***************************************
[2025-10-12 19:56:19] 2025-10-12 23:55:47,736 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2025-10-12 19:56:19] 2025-10-12 23:55:47,752 | INFO     | sufficient remaining disk space (398689566720 B)
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | INFO     | update_server=False
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:56:19] 2025-10-12 23:55:47,753 | INFO     | aborting loop
[2025-10-12 19:56:19] 2025-10-12 23:55:47,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:56:19] 2025-10-12 23:55:48,273 | INFO     | all job control threads have been joined
[2025-10-12 19:56:19] 2025-10-12 23:55:48,532 | INFO     | all payload control threads have been joined
[2025-10-12 19:56:19] 2025-10-12 23:55:48,758 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:48,758 | INFO     | all data control threads have been joined
[2025-10-12 19:56:19] 2025-10-12 23:55:48,759 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:48,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:56:19] 2025-10-12 23:55:49,073 | INFO     | [job] validate thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,278 | INFO     | [job] control thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,285 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,484 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,538 | INFO     | [payload] control thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,551 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,618 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,764 | INFO     | [data] control thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:49,915 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:50,134 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:50,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:56:19] 2025-10-12 23:55:51,581 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:52,991 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:55:58,232 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:56:19] 2025-10-12 23:55:59,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:56:19] 2025-10-12 23:56:12,638 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:56:19] 2025-10-12 23:56:12,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127800774387520)>', '<ExcThread(monitor, started 127800266696448)>']
[2025-10-12 19:56:19] 2025-10-12 23:56:17,968 | INFO     | all workflow threads have been joined
[2025-10-12 19:56:19] 2025-10-12 23:56:17,969 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:56:19] 2025-10-12 23:56:17,969 | INFO     | traces error code: 0
[2025-10-12 19:56:19] 2025-10-12 23:56:17,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:56:19] 2025-10-12 23:56:18,782 | INFO     | PID=2133705 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:56:19] 2025-10-12 23:56:18,782 | INFO     | .. there are 15 such processes running
[2025-10-12 19:56:19] 2025-10-12 23:56:18,783 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:56:19] 2025-10-12 23:56:18,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:56:19] 2025-10-12 23:56:18,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:56:19] 2025-10-12 23:56:18,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:56:19] 2025-10-12 23:56:18,783 | INFO     | [monitor] control thread has ended
[2025-10-12 19:56:19] 2025-10-12 23:56:18,906 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:56:19] 2025-10-12 23:56:18,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:56:19] 2025-10-12 23:56:18,912 [wrapper] pilotpid: 2133705
[2025-10-12 19:56:19] 2025-10-12 23:56:18,914 [wrapper] Pilot exit status: 0
[2025-10-12 19:56:19] 2025-10-12 23:56:18,924 [wrapper] pandaids: 6840223521
[2025-10-12 19:56:19] 2025-10-12 23:56:19,006 [wrapper] cleanup supervisor_pilot 2685745 2133706
[2025-10-12 19:56:19] 2025-10-12 23:56:19,009 [wrapper] Test setup, not cleaning
[2025-10-12 19:56:19] 2025-10-12 23:56:19,012 [wrapper] apfmon messages muted
[2025-10-12 19:56:19] 2025-10-12 23:56:19,015 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:56:19] 2025-10-12 23:56:19,017 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:56:19]  *** Error codes and diagnostics ***
[2025-10-12 19:56:19]     "exeErrorCode": 0,
[2025-10-12 19:56:19]     "exeErrorDiag": "",
[2025-10-12 19:56:19]     "pilotErrorCode": 0,
[2025-10-12 19:56:19]     "pilotErrorDiag": "",
[2025-10-12 19:56:19]  *** Listing of results directory ***
[2025-10-12 19:56:19] total 416272
[2025-10-12 19:56:19] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 19:56:19] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 11:05 queuedata.json
[2025-10-12 19:56:19] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 11:06 runpilot2-wrapper.sh
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:56:19] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 16:23 run_atlas
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 16:23 job.xml
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd 221430180 Oct 12 16:23 EVNT.46676267._004547.pool.root.1
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 16:23 start_atlas.sh
[2025-10-12 19:56:19] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 16:23 shared
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd    569684 Oct 12 16:23 input.tar.gz
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 16:23 init_data.xml
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 16:23 boinc_setup_complete
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 16:23 boinc_lockfile
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 12 16:23 pandaJob.out
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd    975536 Oct 12 16:23 agis_schedconf.cvmfs.json
[2025-10-12 19:56:19] drwx------ 5 whitlerd whitlerd      4096 Oct 12 16:23 pilot3
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd 196552933 Oct 12 19:54 HITS.46676269._081630.pool.root.1
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 19:55 boinc_task_state.xml
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd      1033 Oct 12 19:55 memory_monitor_summary.json
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 19:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd    389299 Oct 12 19:55 log.46676269._081630.job.log.tgz.1
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd        95 Oct 12 19:55 pilot_heartbeat.json
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd      7802 Oct 12 19:55 heartbeat.json
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 19:56 wrapper_checkpoint.txt
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 19:56 boinc_mmap_file
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd       823 Oct 12 19:56 pilotlog.txt
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd   1795972 Oct 12 19:56 log.46676269._081630.job.log.1
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd       357 Oct 12 19:56 output.list
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 19:56 runtime_log
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd   2201600 Oct 12 19:56 result.tar.gz
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 19:56 runtime_log.err
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd       650 Oct 12 19:56 CABMDmNpCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZNkNDmRsS77n.diag
[2025-10-12 19:56:19] -rw-rw-r-- 1 whitlerd whitlerd     21297 Oct 12 19:56 stderr.txt
[2025-10-12 19:56:19] HITS file was successfully produced:
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd 196552933 Oct 12 19:54 shared/HITS.pool.root.1
[2025-10-12 19:56:19]  *** Contents of shared directory: ***
[2025-10-12 19:56:19] total 410928
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd 221430180 Oct 12 16:23 ATLAS.root_0
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 16:23 start_atlas.sh
[2025-10-12 19:56:19] -rw-r--r-- 2 whitlerd whitlerd    569684 Oct 12 16:23 input.tar.gz
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd 196552933 Oct 12 19:54 HITS.pool.root.1
[2025-10-12 19:56:19] -rw------- 1 whitlerd whitlerd   2201600 Oct 12 19:56 result.tar.gz
19:56:20 (2129671): run_atlas exited; CPU time 49966.890934
19:56:20 (2129671): called boinc_finish(0)

</stderr_txt>
]]>

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