Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:42:47 (3257400): wrapper (7.7.26015): starting
08:42:47 (3257400): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:42:47] Arguments: --nthreads 3
[2025-10-13 08:42:47] Threads: 3
[2025-10-13 08:42:47] Checking for CVMFS
[2025-10-13 08:42:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:42:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:42:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:42:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:42:47] 2.9.2.0 233307 5441 68080 151652 0 56 3037788 36864001 0 130560 0 3974359 99.990 185044 828 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 08:42:47] CVMFS is ok
[2025-10-13 08:42:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:42:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:42:47] Further information can be found at the LHC@home message board.
[2025-10-13 08:42:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:42:47] Checking for apptainer binary...
[2025-10-13 08:42:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:42:47] Running /usr/bin/apptainer --version
[2025-10-13 08:42:47] apptainer version 1.4.1-1.1
[2025-10-13 08:42:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:42:47] atlasA221b
[2025-10-13 08:42:47] apptainer works
[2025-10-13 08:42:47] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:42:47] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:42:47] Starting ATLAS job with PandaID=6840223868
[2025-10-13 08:42:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:14:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:14:28] 2025-10-13 08:13:57,159 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:14:28] 2025-10-13 08:13:57,169 | INFO     | cat /etc/os-release:
[2025-10-13 10:14:28] NAME="CentOS Linux"
[2025-10-13 10:14:28] VERSION="7 (Core)"
[2025-10-13 10:14:28] ID="centos"
[2025-10-13 10:14:28] ID_LIKE="rhel fedora"
[2025-10-13 10:14:28] VERSION_ID="7"
[2025-10-13 10:14:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:14:28] ANSI_COLOR="0;31"
[2025-10-13 10:14:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:14:28] HOME_URL="https://www.centos.org/"
[2025-10-13 10:14:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:14:28] 
[2025-10-13 10:14:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:14:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:14:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:14:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:14:28] 
[2025-10-13 10:14:28] 2025-10-13 08:13:57,169 | INFO     | ***************************************
[2025-10-13 10:14:28] 2025-10-13 08:13:57,672 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 10:14:28] 2025-10-13 08:13:57,686 | INFO     | sufficient remaining disk space (357677662208 B)
[2025-10-13 10:14:28] 2025-10-13 08:13:57,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:14:28] 2025-10-13 08:13:57,686 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:14:28] 2025-10-13 08:13:57,686 | INFO     | update_server=False
[2025-10-13 10:14:28] 2025-10-13 08:13:57,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:14:28] 2025-10-13 08:13:57,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:14:28] 2025-10-13 08:13:57,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:14:28] 2025-10-13 08:13:58,064 | INFO     | all data control threads have been joined
[2025-10-13 10:14:28] 2025-10-13 08:13:58,167 | INFO     | all payload control threads have been joined
[2025-10-13 10:14:28] 2025-10-13 08:13:58,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:14:28] 2025-10-13 08:13:58,188 | INFO     | aborting loop
[2025-10-13 10:14:28] 2025-10-13 08:13:58,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:14:28] 2025-10-13 08:13:58,690 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:58,691 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:58,692 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,003 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,070 | INFO     | [data] control thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,085 | INFO     | all job control threads have been joined
[2025-10-13 10:14:28] 2025-10-13 08:13:59,173 | INFO     | [payload] control thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,193 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,429 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,461 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,672 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,692 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,826 | INFO     | [job] validate thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:13:59,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:14:00,091 | INFO     | [job] control thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:14:02,433 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:14:05,604 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:14:28] 2025-10-13 08:14:08,096 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:14:28] 2025-10-13 08:14:09,102 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:14:28] 2025-10-13 08:14:10,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061381027648)>', '<ExcThread(monitor, started 140060720604928)>']
[2025-10-13 10:14:28] 2025-10-13 08:14:15,835 | INFO     | all workflow threads have been joined
[2025-10-13 10:14:28] 2025-10-13 08:14:15,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:14:28] 2025-10-13 08:14:15,837 | INFO     | traces error code: 0
[2025-10-13 10:14:28] 2025-10-13 08:14:15,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | INFO     | PID=3261150 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:14:28] 2025-10-13 08:14:28,295 | INFO     | [monitor] control thread has ended
[2025-10-13 10:14:28] 2025-10-13 08:14:28,341 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:14:28] 2025-10-13 08:14:28,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:14:28] 2025-10-13 08:14:28,347 [wrapper] pilotpid: 3261150
[2025-10-13 10:14:28] 2025-10-13 08:14:28,349 [wrapper] Pilot exit status: 0
[2025-10-13 10:14:28] 2025-10-13 08:14:28,357 [wrapper] pandaids: 6840223868
[2025-10-13 10:14:28] 2025-10-13 08:14:28,378 [wrapper] cleanup supervisor_pilot 3292119 3261151
[2025-10-13 10:14:28] 2025-10-13 08:14:28,381 [wrapper] Test setup, not cleaning
[2025-10-13 10:14:28] 2025-10-13 08:14:28,384 [wrapper] apfmon messages muted
[2025-10-13 10:14:28] 2025-10-13 08:14:28,386 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:14:28] 2025-10-13 08:14:28,389 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:14:28]  *** Error codes and diagnostics ***
[2025-10-13 10:14:28]     "exeErrorCode": 0,
[2025-10-13 10:14:28]     "exeErrorDiag": "",
[2025-10-13 10:14:28]     "pilotErrorCode": 0,
[2025-10-13 10:14:28]     "pilotErrorDiag": "",
[2025-10-13 10:14:28]  *** Listing of results directory ***
[2025-10-13 10:14:28] total 410604
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 10:14:28] -rwx------ 1 boinc boinc     36292 Oct 12 17:14 runpilot2-wrapper.sh
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:14 queuedata.json
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:14:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:42 run_atlas
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:42 job.xml
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc 221574235 Oct 13 08:42 EVNT.46676267._004561.pool.root.1
[2025-10-13 10:14:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:42 shared
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc    569675 Oct 13 08:42 input.tar.gz
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:42 start_atlas.sh
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:42 boinc_setup_complete
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      6197 Oct 13 08:42 init_data.xml
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:42 boinc_lockfile
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:42 pandaJob.out
[2025-10-13 10:14:28] -rw------- 1 boinc boinc    972849 Oct 13 08:42 agis_schedconf.cvmfs.json
[2025-10-13 10:14:28] -rw------- 1 boinc boinc   1560580 Oct 13 08:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:14:28] drwx------ 5 boinc boinc      4096 Oct 13 08:42 pilot3
[2025-10-13 10:14:28] -rw------- 1 boinc boinc 192888289 Oct 13 10:13 HITS.46676269._081972.pool.root.1
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:13 boinc_task_state.xml
[2025-10-13 10:14:28] -rw------- 1 boinc boinc      1020 Oct 13 10:13 memory_monitor_summary.json
[2025-10-13 10:14:28] -rw------- 1 boinc boinc    260526 Oct 13 10:13 log.46676269._081972.job.log.tgz.1
[2025-10-13 10:14:28] -rw------- 1 boinc boinc      7771 Oct 13 10:13 heartbeat.json
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:14 boinc_mmap_file
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:14 wrapper_checkpoint.txt
[2025-10-13 10:14:28] -rw------- 1 boinc boinc       747 Oct 13 10:14 pilotlog.txt
[2025-10-13 10:14:28] -rw------- 1 boinc boinc        95 Oct 13 10:14 pilot_heartbeat.json
[2025-10-13 10:14:28] -rw------- 1 boinc boinc    795706 Oct 13 10:14 log.46676269._081972.job.log.1
[2025-10-13 10:14:28] -rw------- 1 boinc boinc       357 Oct 13 10:14 output.list
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:14 runtime_log
[2025-10-13 10:14:28] -rw------- 1 boinc boinc   1075200 Oct 13 10:14 result.tar.gz
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      8797 Oct 13 10:14 runtime_log.err
[2025-10-13 10:14:28] -rw------- 1 boinc boinc       662 Oct 13 10:14 HoNNDmXxCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGEUMDmSzxPBo.diag
[2025-10-13 10:14:28] -rw-r--r-- 1 boinc boinc      8980 Oct 13 10:14 stderr.txt
[2025-10-13 10:14:28] HITS file was successfully produced:
[2025-10-13 10:14:28] -rw------- 1 boinc boinc 192888289 Oct 13 10:13 shared/HITS.pool.root.1
[2025-10-13 10:14:28]  *** Contents of shared directory: ***
[2025-10-13 10:14:28] total 406384
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc 221574235 Oct 13 08:42 ATLAS.root_0
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc    569675 Oct 13 08:42 input.tar.gz
[2025-10-13 10:14:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:42 start_atlas.sh
[2025-10-13 10:14:28] -rw------- 1 boinc boinc 192888289 Oct 13 10:13 HITS.pool.root.1
[2025-10-13 10:14:28] -rw------- 1 boinc boinc   1075200 Oct 13 10:14 result.tar.gz
10:14:29 (3257400): run_atlas exited; CPU time 15677.065257
10:14:29 (3257400): called boinc_finish(0)

</stderr_txt>
]]>

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