Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:08:15 (3189619): wrapper (7.7.26015): starting
09:08:15 (3189619): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 09:08:15] Arguments: --nthreads 4
[2025-10-14 09:08:15] Threads: 4
[2025-10-14 09:08:15] Checking for CVMFS
[2025-10-14 09:08:15] No cvmfs_config command found, will try listing directly
[2025-10-14 09:08:15] CVMFS is ok
[2025-10-14 09:08:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 09:08:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 09:08:15] Further information can be found at the LHC@home message board.
[2025-10-14 09:08:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 09:08:15] Checking for apptainer binary...
[2025-10-14 09:08:15] which: no apptainer in ((null))
[2025-10-14 09:08:15] apptainer is not installed, using version from CVMFS
[2025-10-14 09:08:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 09:08:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-14 09:08:15] apptainer works
[2025-10-14 09:08:15] Set ATHENA_PROC_NUMBER=4
[2025-10-14 09:08:15] Set ATHENA_CORE_NUMBER=4
[2025-10-14 09:08:15] Starting ATLAS job with PandaID=6840537422
[2025-10-14 09:08:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:52:01 (3283660): wrapper (7.7.26015): starting
09:52:01 (3283660): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 09:52:01] Arguments: --nthreads 4
[2025-10-14 09:52:01] Threads: 4
[2025-10-14 09:52:01] This job has been restarted, cleaning up previous attempt
[2025-10-14 09:52:01] Checking for CVMFS
[2025-10-14 09:52:01] No cvmfs_config command found, will try listing directly
[2025-10-14 09:52:01] CVMFS is ok
[2025-10-14 09:52:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 09:52:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 09:52:01] Further information can be found at the LHC@home message board.
[2025-10-14 09:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 09:52:01] Checking for apptainer binary...
[2025-10-14 09:52:01] which: no apptainer in ((null))
[2025-10-14 09:52:01] apptainer is not installed, using version from CVMFS
[2025-10-14 09:52:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 09:52:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-14 09:52:01] apptainer works
[2025-10-14 09:52:01] Set ATHENA_PROC_NUMBER=4
[2025-10-14 09:52:01] Set ATHENA_CORE_NUMBER=4
[2025-10-14 09:52:01] Starting ATLAS job with PandaID=6840537422
[2025-10-14 09:52:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 13:11:35]  *** The last 200 lines of the pilot log: ***
[2025-10-14 13:11:35] 2025-10-14 10:26:50,162 | INFO     | fitting pss+swap vs Time
[2025-10-14 13:11:35] 2025-10-14 10:26:50,162 | INFO     | sum of square deviations: 1088905998.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | sum of deviations: 6685628853.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | mean x: 1760432971.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | mean y: 2298964.4078947366
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | -- intersect: -10806348879.988428
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | intersect: -10806348879.988428
[2025-10-14 13:11:35] 2025-10-14 10:26:50,163 | INFO     | chi2: 1.8151719439069933
[2025-10-14 13:11:35] 2025-10-14 10:26:50,164 | INFO     | sum of square deviations: 984941258.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,164 | INFO     | sum of deviations: 14956343743.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | mean x: 1760432819.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | mean y: 2310757.925170068
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | -- intersect: -26729880795.190273
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | intersect: -26729880795.190273
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | chi2: 1.1504853905774046
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | current chi2=1.1504853905774046 (change=36.61837962848363 %)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,165 | INFO     | sum of square deviations: 887813855.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | sum of deviations: 14410193449.499998
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | mean x: 1760432666.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | mean y: 2309900.0352112674
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | -- intersect: -28571444746.762047
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | intersect: -28571444746.762047
[2025-10-14 13:11:35] 2025-10-14 10:26:50,166 | INFO     | chi2: 1.1515218890926153
[2025-10-14 13:11:35] 2025-10-14 10:26:50,167 | INFO     | current chi2=1.1515218890926153 (change=-0.09009227963255642 %)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,167 | INFO     | right removable region: 141
[2025-10-14 13:11:35] 2025-10-14 10:26:50,167 | INFO     | sum of square deviations: 984941258.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | sum of deviations: -9718162662.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | mean x: 1760433124.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | mean y: 2322578.5918367347
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | -- intersect: 17372064495.327354
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | intersect: 17372064495.327354
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | chi2: 0.6869561432901964
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | current chi2=0.6869561432901964 (change=62.15476194439269 %)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,168 | INFO     | sum of square deviations: 887813855.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,169 | INFO     | sum of deviations: -8871798794.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,169 | INFO     | mean x: 1760433276.5
[2025-10-14 13:11:35] 2025-10-14 10:26:50,169 | INFO     | mean y: 2321249.4577464787
[2025-10-14 13:11:35] 2025-10-14 10:26:50,169 | INFO     | -- intersect: 17594082994.89086
[2025-10-14 13:11:35] 2025-10-14 10:26:50,170 | INFO     | intersect: 17594082994.89086
[2025-10-14 13:11:35] 2025-10-14 10:26:50,170 | INFO     | chi2: 0.6871032714860564
[2025-10-14 13:11:35] 2025-10-14 10:26:50,170 | INFO     | current chi2=0.6871032714860564 (change=-0.021417407398872948 %)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,170 | INFO     | left removable region: 20
[2025-10-14 13:11:35] 2025-10-14 10:26:50,170 | INFO     | sum of square deviations: 549294020.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | sum of deviations: 655681619.0000001
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | mean x: 1760433246.0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | mean y: 2331939.0661157025
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | -- intersect: -2099063085.9128666
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | intersect: -2099063085.9128666
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | chi2: 0.0014098630271499883
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | -- intersect: -2099063085.9128666
[2025-10-14 13:11:35] 2025-10-14 10:26:50,171 | INFO     | current memory leak: 1.19 B/s (using 121 data points, chi2=0.00)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | could have reported an average CPU frequency of 2717 MHz (9 samples)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | ..............................
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . Timing measurements:
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . get job = 0 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . initial setup = 1 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . payload setup = 7 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . stage-in = 0 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . payload execution = 9234 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,172 | INFO     | . stage-out = 1 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,173 | INFO     | . log creation = 0 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,173 | INFO     | ..............................
[2025-10-14 13:11:35] 2025-10-14 10:26:50,610 | INFO     | 
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | job summary report
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | --------------------------------------------------
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | PanDA job id: 6840537422
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | task id: 46676269
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | errors: (none)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 13:11:35] 2025-10-14 10:26:50,611 | INFO     | pilot state: finished 
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | transexitcode: 0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | exeerrorcode: 0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | exeerrordiag: 
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | exitcode: 0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | exitmsg: OK
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | cpuconsumptiontime: 35361 s
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | nevents: 400
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | neventsw: 0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | pid: 3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | pgrp: 3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | corecount: 4
[2025-10-14 13:11:35] 2025-10-14 10:26:50,612 | INFO     | event service: False
[2025-10-14 13:11:35] 2025-10-14 10:26:50,613 | INFO     | sizes: {0: 2348868, 6: 2349130, 11: 2349158, 9246: 2377966, 9247: 2386988, 9250: 2387044, 9258: 2387430}
[2025-10-14 13:11:35] 2025-10-14 10:26:50,613 | INFO     | --------------------------------------------------
[2025-10-14 13:11:35] 2025-10-14 10:26:50,613 | INFO     | 
[2025-10-14 13:11:35] 2025-10-14 10:26:50,613 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2025-10-14 13:11:35] 2025-10-14 10:26:50,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | job 6840537422 has completed (purged errors)
[2025-10-14 13:11:35] 2025-10-14 10:26:50,649 | INFO     | overall cleanup function is called
[2025-10-14 13:11:35] 2025-10-14 10:26:51,658 | INFO     | --- collectZombieJob: --- 10, [3304107]
[2025-10-14 13:11:35] 2025-10-14 10:26:51,658 | INFO     | zombie collector waiting for pid 3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:51,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 13:11:35] 2025-10-14 10:26:51,659 | INFO     | collected zombie processes
[2025-10-14 13:11:35] 2025-10-14 10:26:51,659 | INFO     | will attempt to kill all subprocesses of pid=3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:52,327 | INFO     | PID=3294614 has CPU usage=17.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 13:11:35] 2025-10-14 10:26:52,328 | INFO     | .. there are 12 such processes running
[2025-10-14 13:11:35] 2025-10-14 10:26:52,820 | INFO     | process IDs to be killed: [3304107] (in reverse order)
[2025-10-14 13:11:35] 2025-10-14 10:26:53,082 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 13:11:35] 2025-10-14 10:26:53,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 13:11:35] 2025-10-14 10:26:53,113 | INFO     | did not find any defunct processes belonging to 3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:53,143 | INFO     | did not find any defunct processes belonging to 3304107
[2025-10-14 13:11:35] 2025-10-14 10:26:53,143 | INFO     | ready for new job
[2025-10-14 13:11:35] 2025-10-14 10:26:53,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 13:11:35] 2025-10-14 10:26:53,146 | INFO     | ***************************************
[2025-10-14 13:11:35] 2025-10-14 10:26:53,148 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 13:11:35] 2025-10-14 10:26:53,148 | INFO     | ***************************************
[2025-10-14 13:11:35] 2025-10-14 10:26:53,149 | INFO     | 
[2025-10-14 13:11:35] 2025-10-14 10:26:53,157 | INFO     | architecture information:
[2025-10-14 13:11:35] 2025-10-14 10:26:53,157 | INFO     | executing command: cat /etc/os-release
[2025-10-14 13:11:35] 2025-10-14 10:26:53,179 | INFO     | cat /etc/os-release:
[2025-10-14 13:11:35] NAME="CentOS Linux"
[2025-10-14 13:11:35] VERSION="7 (Core)"
[2025-10-14 13:11:35] ID="centos"
[2025-10-14 13:11:35] ID_LIKE="rhel fedora"
[2025-10-14 13:11:35] VERSION_ID="7"
[2025-10-14 13:11:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 13:11:35] ANSI_COLOR="0;31"
[2025-10-14 13:11:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 13:11:35] HOME_URL="https://www.centos.org/"
[2025-10-14 13:11:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 13:11:35] 
[2025-10-14 13:11:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 13:11:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 13:11:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 13:11:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 13:11:35] 
[2025-10-14 13:11:35] 2025-10-14 10:26:53,179 | INFO     | ***************************************
[2025-10-14 13:11:35] 2025-10-14 10:26:53,682 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2025-10-14 13:11:35] 2025-10-14 10:26:53,709 | INFO     | sufficient remaining disk space (3357404037120 B)
[2025-10-14 13:11:35] 2025-10-14 10:26:53,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 13:11:35] 2025-10-14 10:26:53,710 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 13:11:35] 2025-10-14 10:26:53,710 | INFO     | update_server=False
[2025-10-14 13:11:35] 2025-10-14 10:26:53,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 13:11:35] 2025-10-14 10:26:53,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:11:35] 2025-10-14 10:26:53,711 | INFO     | aborting loop
[2025-10-14 13:11:35] 2025-10-14 10:26:53,803 | INFO     | all data control threads have been joined
[2025-10-14 13:11:35] 2025-10-14 10:26:54,037 | INFO     | all payload control threads have been joined
[2025-10-14 13:11:35] 2025-10-14 10:26:54,716 | INFO     | [job] retrieve thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:54,717 | INFO     | [job] job monitor thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:54,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 13:11:35] 2025-10-14 10:26:54,809 | INFO     | [data] control thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:54,910 | INFO     | all job control threads have been joined
[2025-10-14 13:11:35] 2025-10-14 10:26:54,949 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,042 | INFO     | [payload] control thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,123 | INFO     | [job] validate thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,246 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 13:11:35] 2025-10-14 10:26:55,464 | INFO     | [payload] failed_post thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,661 | INFO     | [data] copytool_in thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:55,915 | INFO     | [job] control thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:56,166 | INFO     | [payload] validate_post thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:56,289 | INFO     | [job] queue monitor thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:56,751 | INFO     | [data] copytool_out thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:26:57,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 13:11:35] 2025-10-14 10:27:01,198 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:27:03,982 | INFO     | job.realtimelogging is not enabled
[2025-10-14 13:11:35] 2025-10-14 10:27:04,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 13:11:35] 2025-10-14 10:27:25,368 | INFO     | PID=3294614 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 13:11:35] 2025-10-14 10:27:25,368 | INFO     | .. there are 12 such processes running
[2025-10-14 13:11:35] 2025-10-14 10:27:25,368 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 13:11:35] 2025-10-14 10:27:25,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 13:11:35] 2025-10-14 10:27:25,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 13:11:35] 2025-10-14 10:27:28,261 | INFO     | [monitor] cgroup control has ended
[2025-10-14 13:11:35] 2025-10-14 10:27:29,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23290851092288)>', '<ExcThread(monitor, started 23290615658240)>']
[2025-10-14 13:11:35] 2025-10-14 10:27:29,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 13:11:35] 2025-10-14 10:27:29,389 | INFO     | [monitor] control thread has ended
[2025-10-14 13:11:35] 2025-10-14 10:27:34,286 | INFO     | all workflow threads have been joined
[2025-10-14 13:11:35] 2025-10-14 10:27:34,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 13:11:35] 2025-10-14 10:27:34,286 | INFO     | traces error code: 0
[2025-10-14 13:11:35] 2025-10-14 10:27:34,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 13:11:35] 2025-10-14 10:27:34,500 [wrapper] ==== pilot stdout END ====
[2025-10-14 13:11:35] 2025-10-14 10:27:34,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 13:11:35] 2025-10-14 10:27:34,509 [wrapper] pilotpid: 3294614
[2025-10-14 13:11:35] 2025-10-14 10:27:34,513 [wrapper] Pilot exit status: 0
[2025-10-14 13:11:35] 2025-10-14 10:27:34,528 [wrapper] pandaids: 6840537422 6840537422
[2025-10-14 13:11:35] 2025-10-14 10:27:34,702 [wrapper] cleanup supervisor_pilot 3903655 3294615
[2025-10-14 13:11:35] 2025-10-14 10:27:34,706 [wrapper] Test setup, not cleaning
[2025-10-14 13:11:35] 2025-10-14 10:27:34,710 [wrapper] apfmon messages muted
[2025-10-14 13:11:35] 2025-10-14 10:27:34,714 [wrapper] ==== wrapper stdout END ====
[2025-10-14 13:11:35] 2025-10-14 10:27:34,717 [wrapper] ==== wrapper stderr END ====
[2025-10-14 13:11:35]  *** Error codes and diagnostics ***
[2025-10-14 13:11:35]     "exeErrorCode": 0,
[2025-10-14 13:11:35]     "exeErrorDiag": "",
[2025-10-14 13:11:35]     "pilotErrorCode": 0,
[2025-10-14 13:11:35]     "pilotErrorDiag": "",
[2025-10-14 13:11:35]  *** Listing of results directory ***
[2025-10-14 13:11:35] total 628332
[2025-10-14 13:11:35] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 20:20 pilot3.tar.gz
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 20:48 queuedata.json
[2025-10-14 13:11:35] -rwx------ 1 boinc boinc     36292 Oct 12 20:50 runpilot2-wrapper.sh
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc       100 Oct 14 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 13:11:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 09:08 run_atlas
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc       105 Oct 14 09:08 job.xml
[2025-10-14 13:11:35] -rw-r--r-- 3 boinc boinc 223087931 Oct 14 09:08 EVNT.46676267._004422.pool.root.1
[2025-10-14 13:11:35] -rw-r--r-- 3 boinc boinc 223087931 Oct 14 09:08 ATLAS.root_0
[2025-10-14 13:11:35] -rw-r--r-- 2 boinc boinc     15120 Oct 14 09:08 start_atlas.sh
[2025-10-14 13:11:35] drwxrwx--x 2 boinc boinc      4096 Oct 14 09:08 shared
[2025-10-14 13:11:35] -rw-r--r-- 2 boinc boinc    569684 Oct 14 09:08 input.tar.gz
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc         0 Oct 14 09:08 boinc_lockfile
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc      2549 Oct 14 09:52 pandaJob.out
[2025-10-14 13:11:35] -rw------- 1 boinc boinc    972807 Oct 14 09:52 agis_schedconf.cvmfs.json
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc      6693 Oct 14 10:10 init_data.xml
[2025-10-14 13:11:35] -rw------- 1 boinc boinc 190032444 Oct 14 12:26 HITS.46676269._086569.pool.root.1
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc       528 Oct 14 12:26 boinc_task_state.xml
[2025-10-14 13:11:35] -rw------- 1 boinc boinc      1023 Oct 14 12:26 memory_monitor_summary.json
[2025-10-14 13:11:35] -rw------- 1 boinc boinc        97 Oct 14 12:26 pilot_heartbeat.json
[2025-10-14 13:11:35] -rw------- 1 boinc boinc   1560580 Oct 14 12:26 agis_ddmendpoints.agis.ALL.json
[2025-10-14 13:11:35] -rw------- 1 boinc boinc    337342 Oct 14 12:26 log.46676269._086569.job.log.tgz.1
[2025-10-14 13:11:35] -rw------- 1 boinc boinc      7778 Oct 14 12:26 heartbeat.json
[2025-10-14 13:11:35] -rw------- 1 boinc boinc      4908 Oct 14 12:27 pilotlog.txt
[2025-10-14 13:11:35] -rw------- 1 boinc boinc   1308987 Oct 14 12:27 log.46676269._086569.job.log.1
[2025-10-14 13:11:35] -rw------- 1 boinc boinc       357 Oct 14 12:27 output.list
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc       620 Oct 14 12:27 runtime_log
[2025-10-14 13:11:35] -rw------- 1 boinc boinc   1669120 Oct 14 12:27 result.tar.gz
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc      9161 Oct 14 12:27 runtime_log.err
[2025-10-14 13:11:35] -rw------- 1 boinc boinc       787 Oct 14 12:27 VreNDm1JGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm89kNDmDlhf0n.diag
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc        26 Oct 14 13:11 wrapper_checkpoint.txt
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc      8192 Oct 14 13:11 boinc_mmap_file
[2025-10-14 13:11:35] -rw-r--r-- 1 boinc boinc     22700 Oct 14 13:11 stderr.txt
[2025-10-14 13:11:35] HITS file was successfully produced:
[2025-10-14 13:11:35] -rw------- 1 boinc boinc 190032444 Oct 14 12:26 shared/HITS.pool.root.1
[2025-10-14 13:11:35]  *** Contents of shared directory: ***
[2025-10-14 13:11:35] total 405656
[2025-10-14 13:11:35] -rw-r--r-- 3 boinc boinc 223087931 Oct 14 09:08 ATLAS.root_0
[2025-10-14 13:11:35] -rw-r--r-- 2 boinc boinc     15120 Oct 14 09:08 start_atlas.sh
[2025-10-14 13:11:35] -rw-r--r-- 2 boinc boinc    569684 Oct 14 09:08 input.tar.gz
[2025-10-14 13:11:35] -rw------- 1 boinc boinc 190032444 Oct 14 12:26 HITS.pool.root.1
[2025-10-14 13:11:35] -rw------- 1 boinc boinc   1669120 Oct 14 12:27 result.tar.gz
13:11:36 (3283660): run_atlas exited; CPU time 35963.352920
13:11:36 (3283660): called boinc_finish(0)

</stderr_txt>
]]>

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