Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:15 (2182283): wrapper (7.7.26015): starting
17:01:15 (2182283): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:01:16] Arguments: --nthreads 8
[2025-10-12 17:01:16] Threads: 8
[2025-10-12 17:01:16] Checking for CVMFS
[2025-10-12 17:01:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:01:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:01:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:01:18] 2.13.2.0 5248 44794 415356 151636 3 609 21258075 32935936 19467 16776704 0 77802617 99.668 65063439 30302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 17:01:18] CVMFS is ok
[2025-10-12 17:01:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:01:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:01:18] Further information can be found at the LHC@home message board.
[2025-10-12 17:01:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:01:18] Checking for apptainer binary...
[2025-10-12 17:01:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:01:18] Running /usr/bin/apptainer --version
[2025-10-12 17:01:18] apptainer version 1.4.3-1.el9
[2025-10-12 17:01:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:01:19] c6-1-24-1.aglt2.org
[2025-10-12 17:01:19] apptainer works
[2025-10-12 17:01:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:01:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:01:19] Starting ATLAS job with PandaID=6840428770
[2025-10-12 17:01:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:53:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:53:46] 2025-10-13 04:52:26,395 | INFO     | sum of deviations: 216137626207.97583
[2025-10-13 00:53:46] 2025-10-13 04:52:26,395 | INFO     | mean x: 1760317105.1244543
[2025-10-13 00:53:46] 2025-10-13 04:52:26,395 | INFO     | mean y: 2102963.403930131
[2025-10-13 00:53:46] 2025-10-13 04:52:26,395 | INFO     | -- intersect: -12769152475.110786
[2025-10-13 00:53:46] 2025-10-13 04:52:26,395 | INFO     | intersect: -12769152475.110786
[2025-10-13 00:53:46] 2025-10-13 04:52:26,396 | INFO     | chi2: 3.6816326189571207
[2025-10-13 00:53:46] 2025-10-13 04:52:26,396 | INFO     | sum of square deviations: 28826104474.450516
[2025-10-13 00:53:46] 2025-10-13 04:52:26,434 | INFO     | sum of deviations: 243212807951.24518
[2025-10-13 00:53:46] 2025-10-13 04:52:26,434 | INFO     | mean x: 1760316952.6225166
[2025-10-13 00:53:46] 2025-10-13 04:52:26,434 | INFO     | mean y: 2107202.6622516555
[2025-10-13 00:53:46] 2025-10-13 04:52:26,434 | INFO     | -- intersect: -14850112226.118622
[2025-10-13 00:53:46] 2025-10-13 04:52:26,434 | INFO     | intersect: -14850112226.118622
[2025-10-13 00:53:46] 2025-10-13 04:52:26,469 | INFO     | chi2: 2.813794452954427
[2025-10-13 00:53:46] 2025-10-13 04:52:26,470 | INFO     | current chi2=2.813794452954427 (change=23.57210117962618 %)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,470 | INFO     | right removable region: 452
[2025-10-13 00:53:46] 2025-10-13 04:52:26,471 | INFO     | sum of square deviations: 28826069217.69536
[2025-10-13 00:53:46] 2025-10-13 04:52:26,515 | INFO     | sum of deviations: 123737869589.86758
[2025-10-13 00:53:46] 2025-10-13 04:52:26,516 | INFO     | mean x: 1760317257.6291392
[2025-10-13 00:53:46] 2025-10-13 04:52:26,516 | INFO     | mean y: 2117534.40397351
[2025-10-13 00:53:46] 2025-10-13 04:52:26,516 | INFO     | -- intersect: -7554164441.343058
[2025-10-13 00:53:46] 2025-10-13 04:52:26,516 | INFO     | intersect: -7554164441.343058
[2025-10-13 00:53:46] 2025-10-13 04:52:26,553 | INFO     | chi2: 1.487292497964399
[2025-10-13 00:53:46] 2025-10-13 04:52:26,553 | INFO     | current chi2=1.487292497964399 (change=59.60236525757158 %)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,554 | INFO     | sum of square deviations: 27882057311.22983
[2025-10-13 00:53:46] 2025-10-13 04:52:26,591 | INFO     | sum of deviations: 78777450261.59366
[2025-10-13 00:53:46] 2025-10-13 04:52:26,591 | INFO     | mean x: 1760317410.1316965
[2025-10-13 00:53:46] 2025-10-13 04:52:26,591 | INFO     | mean y: 2124794.71875
[2025-10-13 00:53:46] 2025-10-13 04:52:26,591 | INFO     | -- intersect: -4971443535.384881
[2025-10-13 00:53:46] 2025-10-13 04:52:26,591 | INFO     | intersect: -4971443535.384881
[2025-10-13 00:53:46] 2025-10-13 04:52:26,592 | INFO     | chi2: 1.062888670421344
[2025-10-13 00:53:46] 2025-10-13 04:52:26,592 | INFO     | current chi2=1.062888670421344 (change=28.535330348530668 %)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,616 | INFO     | sum of square deviations: 26958882394.75851
[2025-10-13 00:53:46] 2025-10-13 04:52:26,669 | INFO     | sum of deviations: 69329206583.90067
[2025-10-13 00:53:46] 2025-10-13 04:52:26,670 | INFO     | mean x: 1760317562.6343114
[2025-10-13 00:53:46] 2025-10-13 04:52:26,670 | INFO     | mean y: 2126347.690744921
[2025-10-13 00:53:46] 2025-10-13 04:52:26,670 | INFO     | -- intersect: -4524820213.598109
[2025-10-13 00:53:46] 2025-10-13 04:52:26,670 | INFO     | intersect: -4524820213.598109
[2025-10-13 00:53:46] 2025-10-13 04:52:26,671 | INFO     | chi2: 1.0360015020814288
[2025-10-13 00:53:46] 2025-10-13 04:52:26,671 | INFO     | current chi2=1.0360015020814288 (change=2.529631662105945 %)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,671 | INFO     | left removable region: 30
[2025-10-13 00:53:46] 2025-10-13 04:52:26,672 | INFO     | sum of square deviations: 23303776924.568855
[2025-10-13 00:53:46] 2025-10-13 04:52:26,752 | INFO     | sum of deviations: 85532894110.56398
[2025-10-13 00:53:46] 2025-10-13 04:52:26,752 | INFO     | mean x: 1760317837.1327014
[2025-10-13 00:53:46] 2025-10-13 04:52:26,752 | INFO     | mean y: 2132815.86492891
[2025-10-13 00:53:46] 2025-10-13 04:52:26,752 | INFO     | -- intersect: -6458840426.874519
[2025-10-13 00:53:46] 2025-10-13 04:52:26,794 | INFO     | intersect: -6458840426.874519
[2025-10-13 00:53:46] 2025-10-13 04:52:26,795 | INFO     | chi2: 0.14845451874349272
[2025-10-13 00:53:46] 2025-10-13 04:52:26,795 | INFO     | -- intersect: -6458840426.874519
[2025-10-13 00:53:46] 2025-10-13 04:52:26,795 | INFO     | current memory leak: 3.67 B/s (using 422 data points, chi2=0.15)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,796 | INFO     | could have reported an average CPU frequency of 2672 MHz (19 samples)
[2025-10-13 00:53:46] 2025-10-13 04:52:26,796 | INFO     | ..............................
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . Timing measurements:
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . get job = 1 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . initial setup = 7 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . payload setup = 57 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . stage-in = 1 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . payload execution = 27958 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . stage-out = 11 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | . log creation = 2 s
[2025-10-13 00:53:46] 2025-10-13 04:52:26,797 | INFO     | ..............................
[2025-10-13 00:53:46] 2025-10-13 04:52:26,788 | INFO     | monitor loop #1587: job 0:6840428770 is in state 'finished'
[2025-10-13 00:53:46] 2025-10-13 04:52:26,919 | WARNING  | exception caught: deque index out of range
[2025-10-13 00:53:46] 2025-10-13 04:52:27,877 | INFO     | time since job start (28181s) is within the limit (172800.0s)
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | 
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | job summary report
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | --------------------------------------------------
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | PanDA job id: 6840428770
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | task id: 46676269
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | errors: (none)
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:53:46] 2025-10-13 04:52:30,363 | INFO     | pilot state: finished 
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | transexitcode: 0
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | exeerrorcode: 0
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | exeerrordiag: 
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | exitcode: 0
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | exitmsg: OK
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | cpuconsumptiontime: 48277 s
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | nevents: 400
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | neventsw: 0
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | pid: 2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | pgrp: 2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | corecount: 8
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | event service: False
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348969, 16: 2348969, 28: 2349125, 39: 2349153, 52: 2349383, 54: 2349471, 63: 2349499, 28020: 2386382, 2
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | --------------------------------------------------
[2025-10-13 00:53:46] 2025-10-13 04:52:30,364 | INFO     | 
[2025-10-13 00:53:46] 2025-10-13 04:52:30,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 00:53:46] 2025-10-13 04:52:31,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:53:46] 2025-10-13 04:52:31,260 | INFO     | job 6840428770 has completed (purged errors)
[2025-10-13 00:53:46] 2025-10-13 04:52:31,260 | INFO     | overall cleanup function is called
[2025-10-13 00:53:46] 2025-10-13 04:52:32,374 | INFO     | --- collectZombieJob: --- 10, [2197115]
[2025-10-13 00:53:46] 2025-10-13 04:52:32,374 | INFO     | zombie collector waiting for pid 2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:32,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:53:46] 2025-10-13 04:52:32,374 | INFO     | collected zombie processes
[2025-10-13 00:53:46] 2025-10-13 04:52:32,375 | INFO     | will attempt to kill all subprocesses of pid=2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:36,107 | INFO     | PID=2188019 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:53:46] 2025-10-13 04:52:36,111 | INFO     | .. there are 26 such processes running
[2025-10-13 00:53:46] 2025-10-13 04:52:36,196 | INFO     | process IDs to be killed: [2197115] (in reverse order)
[2025-10-13 00:53:46] 2025-10-13 04:52:37,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:53:46] 2025-10-13 04:52:37,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:53:46] 2025-10-13 04:52:37,310 | INFO     | did not find any defunct processes belonging to 2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:37,428 | INFO     | did not find any defunct processes belonging to 2197115
[2025-10-13 00:53:46] 2025-10-13 04:52:37,428 | INFO     | ready for new job
[2025-10-13 00:53:46] 2025-10-13 04:52:37,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:53:46] 2025-10-13 04:52:37,504 | INFO     | ***************************************
[2025-10-13 00:53:46] 2025-10-13 04:52:37,504 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:53:46] 2025-10-13 04:52:37,504 | INFO     | ***************************************
[2025-10-13 00:53:46] 2025-10-13 04:52:37,504 | INFO     | 
[2025-10-13 00:53:46] 2025-10-13 04:52:37,526 | INFO     | architecture information:
[2025-10-13 00:53:46] 2025-10-13 04:52:37,527 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:53:46] 2025-10-13 04:52:37,721 | INFO     | cat /etc/os-release:
[2025-10-13 00:53:46] NAME="CentOS Linux"
[2025-10-13 00:53:46] VERSION="7 (Core)"
[2025-10-13 00:53:46] ID="centos"
[2025-10-13 00:53:46] ID_LIKE="rhel fedora"
[2025-10-13 00:53:46] VERSION_ID="7"
[2025-10-13 00:53:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:53:46] ANSI_COLOR="0;31"
[2025-10-13 00:53:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:53:46] HOME_URL="https://www.centos.org/"
[2025-10-13 00:53:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:53:46] 
[2025-10-13 00:53:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:53:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:53:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:53:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:53:46] 
[2025-10-13 00:53:46] 2025-10-13 04:52:37,722 | INFO     | ***************************************
[2025-10-13 00:53:46] 2025-10-13 04:52:38,224 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 00:53:46] 2025-10-13 04:52:38,423 | INFO     | sufficient remaining disk space (74223452160 B)
[2025-10-13 00:53:46] 2025-10-13 04:52:38,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:53:46] 2025-10-13 04:52:38,424 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:53:46] 2025-10-13 04:52:38,424 | INFO     | update_server=False
[2025-10-13 00:53:46] 2025-10-13 04:52:38,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:53:46] 2025-10-13 04:52:38,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:53:46] 2025-10-13 04:52:39,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:53:46] 2025-10-13 04:52:39,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:53:46] 2025-10-13 04:52:39,147 | INFO     | aborting loop
[2025-10-13 00:53:46] 2025-10-13 04:52:39,387 | INFO     | all job control threads have been joined
[2025-10-13 00:53:46] 2025-10-13 04:52:39,387 | INFO     | all data control threads have been joined
[2025-10-13 00:53:46] 2025-10-13 04:52:39,431 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:39,462 | INFO     | all payload control threads have been joined
[2025-10-13 00:53:46] 2025-10-13 04:52:39,495 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:39,979 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,129 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,153 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,153 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,393 | INFO     | [job] control thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,409 | INFO     | [data] control thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,463 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,469 | INFO     | [payload] control thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,584 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,590 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,651 | INFO     | [job] validate thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:40,651 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:52:41,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:53:46] 2025-10-13 04:52:45,204 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:53:46] 2025-10-13 04:53:14,053 | INFO     | PID=2188019 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:53:46] 2025-10-13 04:53:14,054 | INFO     | .. there are 26 such processes running
[2025-10-13 00:53:46] 2025-10-13 04:53:14,054 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:53:46] 2025-10-13 04:53:14,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:53:46] 2025-10-13 04:53:14,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:53:46] 2025-10-13 04:53:37,602 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:53:46] 2025-10-13 04:53:38,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707256944448)>', '<ExcThread(monitor, started 139706444519168)>']
[2025-10-13 00:53:46] 2025-10-13 04:53:39,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:53:46] 2025-10-13 04:53:39,307 | INFO     | [monitor] control thread has ended
[2025-10-13 00:53:46] 2025-10-13 04:53:43,339 | INFO     | all workflow threads have been joined
[2025-10-13 00:53:46] 2025-10-13 04:53:43,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:53:46] 2025-10-13 04:53:43,339 | INFO     | traces error code: 0
[2025-10-13 00:53:46] 2025-10-13 04:53:43,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:53:46] 2025-10-13 04:53:45,389 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:53:46] 2025-10-13 04:53:45,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:53:46] 2025-10-13 04:53:45,535 [wrapper] pilotpid: 2188019
[2025-10-13 00:53:46] 2025-10-13 04:53:45,580 [wrapper] Pilot exit status: 0
[2025-10-13 00:53:46] 2025-10-13 04:53:45,869 [wrapper] pandaids: 6840428770
[2025-10-13 00:53:46] 2025-10-13 04:53:46,126 [wrapper] cleanup supervisor_pilot 3524293 2188020
[2025-10-13 00:53:46] 2025-10-13 04:53:46,153 [wrapper] Test setup, not cleaning
[2025-10-13 00:53:46] 2025-10-13 04:53:46,157 [wrapper] apfmon messages muted
[2025-10-13 00:53:46] 2025-10-13 04:53:46,178 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:53:46] 2025-10-13 04:53:46,213 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:53:46]  *** Error codes and diagnostics ***
[2025-10-13 00:53:47]     "exeErrorCode": 0,
[2025-10-13 00:53:47]     "exeErrorDiag": "",
[2025-10-13 00:53:47]     "pilotErrorCode": 0,
[2025-10-13 00:53:47]     "pilotErrorDiag": "",
[2025-10-13 00:53:47]  *** Listing of results directory ***
[2025-10-13 00:53:47] total 419168
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:04 queuedata.json
[2025-10-13 00:53:47] -rwx------. 1 boincer umatlas     36292 Oct 12 13:05 runpilot2-wrapper.sh
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:53:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:01 run_atlas
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:01 job.xml
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas 222121714 Oct 12 17:01 EVNT.46676267._004799.pool.root.1
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:01 start_atlas.sh
[2025-10-13 00:53:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:01 shared
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 17:01 input.tar.gz
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:01 boinc_lockfile
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:01 pandaJob.out
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas    975536 Oct 12 17:02 agis_schedconf.cvmfs.json
[2025-10-13 00:53:47] drwx------. 5 boincer umatlas      4096 Oct 12 17:02 pilot3
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas      6844 Oct 13 00:49 init_data.xml
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas 195279371 Oct 13 00:50 HITS.46676269._084354.pool.root.1
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas       531 Oct 13 00:50 boinc_task_state.xml
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas      1041 Oct 13 00:51 memory_monitor_summary.json
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas    621049 Oct 13 00:51 log.46676269._084354.job.log.tgz.1
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas      7829 Oct 13 00:52 heartbeat.json
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas        95 Oct 13 00:53 pilot_heartbeat.json
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas      4824 Oct 13 00:53 pilotlog.txt
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:53 boinc_mmap_file
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas        28 Oct 13 00:53 wrapper_checkpoint.txt
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas   3341471 Oct 13 00:53 log.46676269._084354.job.log.1
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas       357 Oct 13 00:53 output.list
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas       620 Oct 13 00:53 runtime_log
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas   3983360 Oct 13 00:53 result.tar.gz
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 00:53 runtime_log.err
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas       656 Oct 13 00:53 G5yLDmEhES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5lkNDmBgtvQn.diag
[2025-10-13 00:53:47] -rw-r--r--. 1 boincer umatlas     21194 Oct 13 00:53 stderr.txt
[2025-10-13 00:53:47] HITS file was successfully produced:
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas 195279371 Oct 13 00:50 shared/HITS.pool.root.1
[2025-10-13 00:53:47]  *** Contents of shared directory: ***
[2025-10-13 00:53:47] total 412092
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas 222121714 Oct 12 17:01 ATLAS.root_0
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:01 start_atlas.sh
[2025-10-13 00:53:47] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 17:01 input.tar.gz
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas 195279371 Oct 13 00:50 HITS.pool.root.1
[2025-10-13 00:53:47] -rw-------. 1 boincer umatlas   3983360 Oct 13 00:53 result.tar.gz
00:53:49 (2182283): run_atlas exited; CPU time 49148.140889
00:53:49 (2182283): called boinc_finish(0)

</stderr_txt>
]]>

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