Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:05:16 (3520237): wrapper (7.7.26015): starting
08:05:16 (3520237): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:05:16] Arguments: --nthreads 3
[2025-10-13 08:05:16] Threads: 3
[2025-10-13 08:05:16] Checking for CVMFS
[2025-10-13 08:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:05:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:05:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:05:16] 2.9.2.0 1855376 5410 86332 151650 3 57 25990095 36864001 0 130560 0 4397136 99.991 184128 720 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 08:05:16] CVMFS is ok
[2025-10-13 08:05:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:05:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:05:16] Further information can be found at the LHC@home message board.
[2025-10-13 08:05:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:05:16] Checking for apptainer binary...
[2025-10-13 08:05:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:05:16] Running /usr/bin/apptainer --version
[2025-10-13 08:05:16] apptainer version 1.4.1-1.1
[2025-10-13 08:05:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:05:16] thA331b
[2025-10-13 08:05:16] apptainer works
[2025-10-13 08:05:16] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:05:16] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:05:16] Starting ATLAS job with PandaID=6840392432
[2025-10-13 08:05:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:28:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:28:33] 2025-10-13 07:27:29,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 09:28:33] 2025-10-13 07:27:29,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:28:33] 2025-10-13 07:27:29,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:28:33] 2025-10-13 07:27:29,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:28:33] 2025-10-13 07:27:29,123 | INFO     | all data control threads have been joined
[2025-10-13 09:28:33] 2025-10-13 07:27:29,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:28:33] 2025-10-13 07:27:29,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:28:33] 2025-10-13 07:27:29,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:28:33] 2025-10-13 07:27:29,373 | INFO     | will abort loop
[2025-10-13 09:28:33] 2025-10-13 07:27:29,534 | INFO     | all payload control threads have been joined
[2025-10-13 09:28:33] 2025-10-13 07:27:29,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:28:33] 2025-10-13 07:27:30,123 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,128 | INFO     | [data] control thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,181 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,220 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,378 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,466 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,540 | INFO     | [payload] control thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,541 | INFO     | all job control threads have been joined
[2025-10-13 09:28:33] 2025-10-13 07:27:30,976 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:30,996 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:31,512 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:31,536 | INFO     | [job] validate thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:31,546 | INFO     | [job] control thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:31,565 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:31,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:28:33] 2025-10-13 07:27:32,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:28:33] 2025-10-13 07:27:33,022 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:35,697 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:27:39,242 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:28:33] 2025-10-13 07:27:40,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:28:33] 2025-10-13 07:28:27,587 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:28:33] 2025-10-13 07:28:28,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539617355584)>', '<ExcThread(monitor, started 140538904831744)>']
[2025-10-13 09:28:33] 2025-10-13 07:28:28,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:28:33] 2025-10-13 07:28:28,423 | INFO     | [monitor] control thread has ended
[2025-10-13 09:28:33] 2025-10-13 07:28:33,154 | INFO     | all workflow threads have been joined
[2025-10-13 09:28:33] 2025-10-13 07:28:33,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:28:33] 2025-10-13 07:28:33,154 | INFO     | traces error code: 0
[2025-10-13 09:28:33] 2025-10-13 07:28:33,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:28:33] 2025-10-13 07:28:33,206 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:28:33] 2025-10-13 07:28:33,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:28:33] 2025-10-13 07:28:33,211 [wrapper] pilotpid: 3523958
[2025-10-13 09:28:33] 2025-10-13 07:28:33,213 [wrapper] Pilot exit status: 0
[2025-10-13 09:28:33] 2025-10-13 07:28:33,220 [wrapper] pandaids: 6840392432
[2025-10-13 09:28:33] 2025-10-13 07:28:33,237 [wrapper] cleanup supervisor_pilot 3542285 3523959
[2025-10-13 09:28:33] 2025-10-13 07:28:33,239 [wrapper] Test setup, not cleaning
[2025-10-13 09:28:33] 2025-10-13 07:28:33,242 [wrapper] apfmon messages muted
[2025-10-13 09:28:33] 2025-10-13 07:28:33,244 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:28:33] 2025-10-13 07:28:33,246 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:28:33]  *** Error codes and diagnostics ***
[2025-10-13 09:28:33]     "exeErrorCode": 0,
[2025-10-13 09:28:33]     "exeErrorDiag": "",
[2025-10-13 09:28:33]     "pilotErrorCode": 0,
[2025-10-13 09:28:33]     "pilotErrorDiag": "",
[2025-10-13 09:28:33]  *** Listing of results directory ***
[2025-10-13 09:28:33] total 411900
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:42 pilot3.tar.gz
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:47 queuedata.json
[2025-10-13 09:28:33] -rwx------ 1 boinc boinc     36292 Oct 12 18:47 runpilot2-wrapper.sh
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:28:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:05 run_atlas
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:05 job.xml
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc 221060547 Oct 13 08:05 EVNT.46676267._004783.pool.root.1
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc    569679 Oct 13 08:05 input.tar.gz
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:05 start_atlas.sh
[2025-10-13 09:28:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:05 shared
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:05 boinc_setup_complete
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      6441 Oct 13 08:05 init_data.xml
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:05 boinc_lockfile
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:05 pandaJob.out
[2025-10-13 09:28:33] -rw------- 1 boinc boinc    973230 Oct 13 08:05 agis_schedconf.cvmfs.json
[2025-10-13 09:28:33] -rw------- 1 boinc boinc   1560580 Oct 13 08:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:28:33] drwx------ 5 boinc boinc      4096 Oct 13 08:05 pilot3
[2025-10-13 09:28:33] -rw------- 1 boinc boinc        95 Oct 13 09:26 pilot_heartbeat.json
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc       529 Oct 13 09:27 boinc_task_state.xml
[2025-10-13 09:28:33] -rw------- 1 boinc boinc 194892718 Oct 13 09:27 HITS.46676269._083893.pool.root.1
[2025-10-13 09:28:33] -rw------- 1 boinc boinc      1020 Oct 13 09:27 memory_monitor_summary.json
[2025-10-13 09:28:33] -rw------- 1 boinc boinc    246848 Oct 13 09:27 log.46676269._083893.job.log.tgz.1
[2025-10-13 09:28:33] -rw------- 1 boinc boinc      7766 Oct 13 09:27 heartbeat.json
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 09:28 boinc_mmap_file
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc        27 Oct 13 09:28 wrapper_checkpoint.txt
[2025-10-13 09:28:33] -rw------- 1 boinc boinc      4814 Oct 13 09:28 pilotlog.txt
[2025-10-13 09:28:33] -rw------- 1 boinc boinc    723730 Oct 13 09:28 log.46676269._083893.job.log.1
[2025-10-13 09:28:33] -rw------- 1 boinc boinc       357 Oct 13 09:28 output.list
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 09:28 runtime_log
[2025-10-13 09:28:33] -rw------- 1 boinc boinc    993280 Oct 13 09:28 result.tar.gz
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      8782 Oct 13 09:28 runtime_log.err
[2025-10-13 09:28:33] -rw------- 1 boinc boinc       659 Oct 13 09:28 XZPNDmLPES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKikNDmKu14xn.diag
[2025-10-13 09:28:33] -rw-r--r-- 1 boinc boinc      7441 Oct 13 09:28 stderr.txt
[2025-10-13 09:28:33] HITS file was successfully produced:
[2025-10-13 09:28:33] -rw------- 1 boinc boinc 194892718 Oct 13 09:27 shared/HITS.pool.root.1
[2025-10-13 09:28:33]  *** Contents of shared directory: ***
[2025-10-13 09:28:33] total 407764
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc 221060547 Oct 13 08:05 ATLAS.root_0
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc    569679 Oct 13 08:05 input.tar.gz
[2025-10-13 09:28:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:05 start_atlas.sh
[2025-10-13 09:28:33] -rw------- 1 boinc boinc 194892718 Oct 13 09:27 HITS.pool.root.1
[2025-10-13 09:28:33] -rw------- 1 boinc boinc    993280 Oct 13 09:28 result.tar.gz
09:28:34 (3520237): run_atlas exited; CPU time 14120.636113
09:28:34 (3520237): called boinc_finish(0)

</stderr_txt>
]]>

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