Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:41 (3436818): wrapper (7.7.26015): starting
08:44:41 (3436818): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:44:41] Arguments: --nthreads 3
[2025-10-13 08:44:41] Threads: 3
[2025-10-13 08:44:41] Checking for CVMFS
[2025-10-13 08:44:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:44:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:44:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:44:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:44:41] 2.9.2.0 1837252 5414 86236 151652 2 56 21899054 36864000 0 130560 0 4208855 99.991 187741 905 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 08:44:41] CVMFS is ok
[2025-10-13 08:44:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:44:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:44:41] Further information can be found at the LHC@home message board.
[2025-10-13 08:44:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:44:41] Checking for apptainer binary...
[2025-10-13 08:44:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:44:41] Running /usr/bin/apptainer --version
[2025-10-13 08:44:41] apptainer version 1.4.1-1.1
[2025-10-13 08:44:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:44:41] legendA257
[2025-10-13 08:44:41] apptainer works
[2025-10-13 08:44:41] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:44:41] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:44:41] Starting ATLAS job with PandaID=6840081625
[2025-10-13 08:44:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:05:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:05:08]  status=None
[2025-10-13 10:05:08]  status_code=0
[2025-10-13 10:05:08]  storage_token=
[2025-10-13 10:05:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840081625/log.46676269._079780.job.log.tgz.1
[2025-10-13 10:05:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/63/log.46676269._079780.job.log.tgz.1
[2025-10-13 10:05:08]  workdir=None
[2025-10-13 10:05:08] ]
[2025-10-13 10:05:08] 2025-10-13 08:04:28,492 | INFO     | transferring file log.46676269._079780.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840081625/log.46676269._079780.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 10:05:08] 2025-10-13 08:04:28,492 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840081625/log.46676269._079780.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0797
[2025-10-13 10:05:08] 2025-10-13 08:04:28,504 | INFO     | adding to output.list: log.46676269._079780.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/63/log.46676269._079780.job.log.tg
[2025-10-13 10:05:08] 2025-10-13 08:04:28,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:05:08] 2025-10-13 08:04:28,505 | INFO     | summary of transferred files:
[2025-10-13 10:05:08] 2025-10-13 08:04:28,505 | INFO     |  -- lfn=log.46676269._079780.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:05:08] 2025-10-13 08:04:28,505 | INFO     | stage-out finished correctly
[2025-10-13 10:05:08] 2025-10-13 08:04:29,340 | INFO     | time since job start (4782s) is within the limit (172800.0s)
[2025-10-13 10:05:08] 2025-10-13 08:04:30,281 | INFO     | monitor loop #369: job 0:6840081625 is in state 'finished'
[2025-10-13 10:05:08] 2025-10-13 08:04:30,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:05:08] 2025-10-13 08:04:31,210 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:05:08] 2025-10-13 08:04:31,346 | INFO     | time since job start (4784s) is within the limit (172800.0s)
[2025-10-13 10:05:08] 2025-10-13 08:04:31,555 | INFO     | job 6840081625 has state=finished
[2025-10-13 10:05:08] 2025-10-13 08:04:31,555 | INFO     | preparing for final server update for job 6840081625 in state='finished'
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | job 6840081625 has finished - writing final server update
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:05:08] 2025-10-13 08:04:31,556 | INFO     | executing command: lscpu
[2025-10-13 10:05:08] 2025-10-13 08:04:31,572 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:05:08] 2025-10-13 08:04:32,785 | INFO     | monitor loop #370: job 0:6840081625 is in state 'finished'
[2025-10-13 10:05:08] 2025-10-13 08:04:32,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:05:08] 2025-10-13 08:04:33,351 | INFO     | time since job start (4786s) is within the limit (172800.0s)
[2025-10-13 10:05:08] 2025-10-13 08:04:35,288 | INFO     | monitor loop #371: job 0:6840081625 is in state 'finished'
[2025-10-13 10:05:08] 2025-10-13 08:04:35,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:05:08] 2025-10-13 08:04:35,356 | INFO     | time since job start (4788s) is within the limit (172800.0s)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,041 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:05:08] 2025-10-13 08:04:36,042 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3560.789833333333
[2025-10-13 10:05:08] 2025-10-13 08:04:36,043 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081625/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,044 | INFO     | extracted standard info from prmon json
[2025-10-13 10:05:08] 2025-10-13 08:04:36,044 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:05:08] 2025-10-13 08:04:36,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:05:08] 2025-10-13 08:04:36,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:05:08] 2025-10-13 08:04:36,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | sum of square deviations: 115715658.0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | sum of deviations: -10279272687.0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | mean x: 1760340376.5
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | mean y: 2453794.361111111
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | -- intersect: 156377304568.48666
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | intersect: 156377304568.48666
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | chi2: 0.07386723777044656
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | -- intersect: 156377304568.48666
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | current memory leak: -88.83 B/s (using 72 data points, chi2=0.07)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,045 | INFO     | could have reported an average CPU frequency of 3857 MHz (6 samples)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | ..............................
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . Timing measurements:
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . get job = 0 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . initial setup = 1 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . payload setup = 2 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . stage-in = 0 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . payload execution = 4761 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . stage-out = 0 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | . log creation = 0 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,046 | INFO     | ..............................
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | 
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | job summary report
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | --------------------------------------------------
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | PanDA job id: 6840081625
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | task id: 46676269
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | errors: (none)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | pilot state: finished 
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | transexitcode: 0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | exeerrorcode: 0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | exeerrordiag: 
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | exitcode: 0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | exitmsg: OK
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | cpuconsumptiontime: 13677 s
[2025-10-13 10:05:08] 2025-10-13 08:04:36,077 | INFO     | nevents: 400
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | neventsw: 0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | pid: 3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | pgrp: 3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | corecount: 3
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | event service: False
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | sizes: {0: 2348860, 2: 2349122, 10: 2349150, 4767: 2375538, 4768: 2384542, 4771: 2384598, 4776: 2384920}
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | --------------------------------------------------
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | 
[2025-10-13 10:05:08] 2025-10-13 08:04:36,078 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | job 6840081625 has completed (purged errors)
[2025-10-13 10:05:08] 2025-10-13 08:04:36,090 | INFO     | overall cleanup function is called
[2025-10-13 10:05:08] 2025-10-13 08:04:37,097 | INFO     | --- collectZombieJob: --- 10, [3446978]
[2025-10-13 10:05:08] 2025-10-13 08:04:37,097 | INFO     | zombie collector waiting for pid 3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:37,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:05:08] 2025-10-13 08:04:37,097 | INFO     | collected zombie processes
[2025-10-13 10:05:08] 2025-10-13 08:04:37,097 | INFO     | will attempt to kill all subprocesses of pid=3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:37,140 | INFO     | process IDs to be killed: [3446978] (in reverse order)
[2025-10-13 10:05:08] 2025-10-13 08:04:37,164 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:05:08] 2025-10-13 08:04:37,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:05:08] 2025-10-13 08:04:37,165 | INFO     | did not find any defunct processes belonging to 3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:37,166 | INFO     | did not find any defunct processes belonging to 3446978
[2025-10-13 10:05:08] 2025-10-13 08:04:37,166 | INFO     | ready for new job
[2025-10-13 10:05:08] 2025-10-13 08:04:37,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:05:08] 2025-10-13 08:04:37,167 | INFO     | ***************************************
[2025-10-13 10:05:08] 2025-10-13 08:04:37,167 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:05:08] 2025-10-13 08:04:37,167 | INFO     | ***************************************
[2025-10-13 10:05:08] 2025-10-13 08:04:37,167 | INFO     | 
[2025-10-13 10:05:08] 2025-10-13 08:04:37,168 | INFO     | architecture information:
[2025-10-13 10:05:08] 2025-10-13 08:04:37,168 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:05:08] 2025-10-13 08:04:37,176 | INFO     | cat /etc/os-release:
[2025-10-13 10:05:08] NAME="CentOS Linux"
[2025-10-13 10:05:08] VERSION="7 (Core)"
[2025-10-13 10:05:08] ID="centos"
[2025-10-13 10:05:08] ID_LIKE="rhel fedora"
[2025-10-13 10:05:08] VERSION_ID="7"
[2025-10-13 10:05:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:05:08] ANSI_COLOR="0;31"
[2025-10-13 10:05:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:05:08] HOME_URL="https://www.centos.org/"
[2025-10-13 10:05:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:05:08] 
[2025-10-13 10:05:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:05:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:05:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:05:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:05:08] 
[2025-10-13 10:05:08] 2025-10-13 08:04:37,176 | INFO     | ***************************************
[2025-10-13 10:05:08] 2025-10-13 08:04:37,679 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 10:05:08] 2025-10-13 08:04:37,691 | INFO     | sufficient remaining disk space (338124865536 B)
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | INFO     | update_server=False
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:05:08] 2025-10-13 08:04:37,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:05:08] 2025-10-13 08:04:37,736 | INFO     | all payload control threads have been joined
[2025-10-13 10:05:08] 2025-10-13 08:04:37,792 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:05:08] 2025-10-13 08:04:37,792 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:05:08] 2025-10-13 08:04:37,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:05:08] 2025-10-13 08:04:37,793 | INFO     | will abort loop
[2025-10-13 10:05:08] 2025-10-13 08:04:38,621 | INFO     | all data control threads have been joined
[2025-10-13 10:05:08] 2025-10-13 08:04:38,698 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:38,698 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:38,742 | INFO     | [payload] control thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:38,798 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:05:08] 2025-10-13 08:04:39,139 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,273 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,325 | INFO     | all job control threads have been joined
[2025-10-13 10:05:08] 2025-10-13 08:04:39,446 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,627 | INFO     | [data] control thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,874 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:39,962 | INFO     | [job] validate thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:40,071 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:40,123 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:40,331 | INFO     | [job] control thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:41,057 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:41,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:47,967 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:05:08] 2025-10-13 08:04:48,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:05:08] 2025-10-13 08:04:51,699 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:05:08] 2025-10-13 08:04:53,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548315572032)>', '<ExcThread(monitor, started 140547830310656)>']
[2025-10-13 10:05:08] 2025-10-13 08:04:58,559 | INFO     | all workflow threads have been joined
[2025-10-13 10:05:08] 2025-10-13 08:04:58,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:05:08] 2025-10-13 08:04:58,560 | INFO     | traces error code: 0
[2025-10-13 10:05:08] 2025-10-13 08:04:58,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:05:08] 2025-10-13 08:05:08,469 | INFO     | PID=3440536 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:05:08] 2025-10-13 08:05:08,469 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:05:08] 2025-10-13 08:05:08,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:05:08] 2025-10-13 08:05:08,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:05:08] 2025-10-13 08:05:08,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:05:08] 2025-10-13 08:05:08,470 | INFO     | [monitor] control thread has ended
[2025-10-13 10:05:08] 2025-10-13 08:05:08,516 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:05:08] 2025-10-13 08:05:08,518 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:05:08] 2025-10-13 08:05:08,520 [wrapper] pilotpid: 3440536
[2025-10-13 10:05:08] 2025-10-13 08:05:08,522 [wrapper] Pilot exit status: 0
[2025-10-13 10:05:08] 2025-10-13 08:05:08,529 [wrapper] pandaids: 6840081625
[2025-10-13 10:05:08] 2025-10-13 08:05:08,545 [wrapper] cleanup supervisor_pilot 3458751 3440537
[2025-10-13 10:05:08] 2025-10-13 08:05:08,548 [wrapper] Test setup, not cleaning
[2025-10-13 10:05:08] 2025-10-13 08:05:08,550 [wrapper] apfmon messages muted
[2025-10-13 10:05:08] 2025-10-13 08:05:08,552 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:05:08] 2025-10-13 08:05:08,554 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:05:08]  *** Error codes and diagnostics ***
[2025-10-13 10:05:08]     "exeErrorCode": 0,
[2025-10-13 10:05:08]     "exeErrorDiag": "",
[2025-10-13 10:05:08]     "pilotErrorCode": 0,
[2025-10-13 10:05:08]     "pilotErrorDiag": "",
[2025-10-13 10:05:08]  *** Listing of results directory ***
[2025-10-13 10:05:08] total 400336
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:41 queuedata.json
[2025-10-13 10:05:08] -rwx------ 1 boinc boinc     36292 Oct 12 15:43 runpilot2-wrapper.sh
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc       100 Oct 13 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:05:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 08:44 run_atlas
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc       105 Oct 13 08:44 job.xml
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc 219249616 Oct 13 08:44 EVNT.46676267._004018.pool.root.1
[2025-10-13 10:05:08] drwxrwx--x 2 boinc boinc      4096 Oct 13 08:44 shared
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc    569681 Oct 13 08:44 input.tar.gz
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:44 start_atlas.sh
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:44 boinc_setup_complete
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc      6442 Oct 13 08:44 init_data.xml
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 08:44 boinc_lockfile
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc      2550 Oct 13 08:44 pandaJob.out
[2025-10-13 10:05:08] -rw------- 1 boinc boinc    972849 Oct 13 08:44 agis_schedconf.cvmfs.json
[2025-10-13 10:05:08] -rw------- 1 boinc boinc   1560580 Oct 13 08:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:05:08] drwx------ 5 boinc boinc      4096 Oct 13 08:44 pilot3
[2025-10-13 10:05:08] -rw------- 1 boinc boinc        95 Oct 13 10:04 pilot_heartbeat.json
[2025-10-13 10:05:08] -rw------- 1 boinc boinc 184866009 Oct 13 10:04 HITS.46676269._079780.pool.root.1
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:04 boinc_task_state.xml
[2025-10-13 10:05:08] -rw------- 1 boinc boinc      1021 Oct 13 10:04 memory_monitor_summary.json
[2025-10-13 10:05:08] -rw------- 1 boinc boinc    259203 Oct 13 10:04 log.46676269._079780.job.log.tgz.1
[2025-10-13 10:05:08] -rw------- 1 boinc boinc      7771 Oct 13 10:04 heartbeat.json
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:04 boinc_mmap_file
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:04 wrapper_checkpoint.txt
[2025-10-13 10:05:08] -rw------- 1 boinc boinc       747 Oct 13 10:05 pilotlog.txt
[2025-10-13 10:05:08] -rw------- 1 boinc boinc    705420 Oct 13 10:05 log.46676269._079780.job.log.1
[2025-10-13 10:05:08] -rw------- 1 boinc boinc       357 Oct 13 10:05 output.list
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:05 runtime_log
[2025-10-13 10:05:08] -rw------- 1 boinc boinc    983040 Oct 13 10:05 result.tar.gz
[2025-10-13 10:05:08] -rw------- 1 boinc boinc       662 Oct 13 10:05 vyDMDmbXBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU4jNDm71ov9m.diag
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc      8797 Oct 13 10:05 runtime_log.err
[2025-10-13 10:05:08] -rw-r--r-- 1 boinc boinc     21980 Oct 13 10:05 stderr.txt
[2025-10-13 10:05:08] HITS file was successfully produced:
[2025-10-13 10:05:08] -rw------- 1 boinc boinc 184866009 Oct 13 10:04 shared/HITS.pool.root.1
[2025-10-13 10:05:08]  *** Contents of shared directory: ***
[2025-10-13 10:05:08] total 396192
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc 219249616 Oct 13 08:44 ATLAS.root_0
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc    569681 Oct 13 08:44 input.tar.gz
[2025-10-13 10:05:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 08:44 start_atlas.sh
[2025-10-13 10:05:08] -rw------- 1 boinc boinc 184866009 Oct 13 10:04 HITS.pool.root.1
[2025-10-13 10:05:08] -rw------- 1 boinc boinc    983040 Oct 13 10:05 result.tar.gz
10:05:10 (3436818): run_atlas exited; CPU time 13695.422432
10:05:10 (3436818): called boinc_finish(0)

</stderr_txt>
]]>

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