Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:22:12 (3124802): wrapper (7.7.26015): starting
16:22:12 (3124802): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 16:22:12] Arguments: --nthreads 9
[2025-10-12 16:22:12] Threads: 9
[2025-10-12 16:22:12] Checking for CVMFS
[2025-10-12 16:22:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:22:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:22:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:22:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:22:14] 2.13.2.0 1173468 124290 182672 151636 3 246 37891097 40960000 24000 16776704 0 255188600 99.763 156544081 36041 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:22:14] CVMFS is ok
[2025-10-12 16:22:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:22:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:22:14] Further information can be found at the LHC@home message board.
[2025-10-12 16:22:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:22:14] Checking for apptainer binary...
[2025-10-12 16:22:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:22:14] Running /usr/bin/apptainer --version
[2025-10-12 16:22:14] apptainer version 1.4.3-1.el9
[2025-10-12 16:22:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:22:15] c-212-20.aglt2.org
[2025-10-12 16:22:15] apptainer works
[2025-10-12 16:22:15] Set ATHENA_PROC_NUMBER=9
[2025-10-12 16:22:15] Set ATHENA_CORE_NUMBER=9
[2025-10-12 16:22:15] Starting ATLAS job with PandaID=6840390885
[2025-10-12 16:22:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:32:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:32:44] 2025-10-13 03:31:38,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:32:44] 2025-10-13 03:31:38,414 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:32:44] 2025-10-13 03:31:38,415 | INFO     | sum of square deviations: 22646952773.34205
[2025-10-12 23:32:44] 2025-10-13 03:31:38,439 | INFO     | sum of deviations: 48790642759.289536
[2025-10-12 23:32:44] 2025-10-13 03:31:38,439 | INFO     | mean x: 1760313513.5526316
[2025-10-12 23:32:44] 2025-10-13 03:31:38,439 | INFO     | mean y: 2540466.0550239235
[2025-10-12 23:32:44] 2025-10-13 03:31:38,439 | INFO     | -- intersect: -3789882675.5340047
[2025-10-12 23:32:44] 2025-10-13 03:31:38,440 | INFO     | intersect: -3789882675.5340047
[2025-10-12 23:32:44] 2025-10-13 03:31:38,440 | INFO     | chi2: 5.036458567251043
[2025-10-12 23:32:44] 2025-10-13 03:31:38,441 | INFO     | sum of square deviations: 21843882250.12597
[2025-10-12 23:32:44] 2025-10-13 03:31:38,468 | INFO     | sum of deviations: 47764089879.95405
[2025-10-12 23:32:44] 2025-10-13 03:31:38,468 | INFO     | mean x: 1760313361.0460048
[2025-10-12 23:32:44] 2025-10-13 03:31:38,468 | INFO     | mean y: 2540271.0024213074
[2025-10-12 23:32:44] 2025-10-13 03:31:38,468 | INFO     | -- intersect: -3846581631.007488
[2025-10-12 23:32:44] 2025-10-13 03:31:38,468 | INFO     | intersect: -3846581631.007488
[2025-10-12 23:32:44] 2025-10-13 03:31:38,469 | INFO     | chi2: 5.037380532566141
[2025-10-12 23:32:44] 2025-10-13 03:31:38,469 | INFO     | current chi2=5.037380532566141 (change=-0.018305825468177078 %)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,469 | INFO     | right removable region: 412
[2025-10-12 23:32:44] 2025-10-13 03:31:38,470 | INFO     | sum of square deviations: 21843944960.82804
[2025-10-12 23:32:44] 2025-10-13 03:31:38,490 | INFO     | sum of deviations: -87132855557.56903
[2025-10-12 23:32:44] 2025-10-13 03:31:38,491 | INFO     | mean x: 1760313666.0532687
[2025-10-12 23:32:44] 2025-10-13 03:31:38,491 | INFO     | mean y: 2566253.1622276027
[2025-10-12 23:32:44] 2025-10-13 03:31:38,491 | INFO     | -- intersect: 7024244648.4927025
[2025-10-12 23:32:44] 2025-10-13 03:31:38,491 | INFO     | intersect: 7024244648.4927025
[2025-10-12 23:32:44] 2025-10-13 03:31:38,492 | INFO     | chi2: 1.1771793925670602
[2025-10-12 23:32:44] 2025-10-13 03:31:38,492 | INFO     | current chi2=1.1771793925670602 (change=76.62684251546264 %)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,492 | INFO     | sum of square deviations: 21060146810.8138
[2025-10-12 23:32:44] 2025-10-13 03:31:38,497 | INFO     | sum of deviations: -132236816723.0294
[2025-10-12 23:32:44] 2025-10-13 03:31:38,498 | INFO     | mean x: 1760313818.5539215
[2025-10-12 23:32:44] 2025-10-13 03:31:38,498 | INFO     | mean y: 2574988.455882353
[2025-10-12 23:32:44] 2025-10-13 03:31:38,498 | INFO     | -- intersect: 11055598402.310041
[2025-10-12 23:32:44] 2025-10-13 03:31:38,498 | INFO     | intersect: 11055598402.310041
[2025-10-12 23:32:44] 2025-10-13 03:31:38,499 | INFO     | chi2: 0.5322634170797691
[2025-10-12 23:32:44] 2025-10-13 03:31:38,499 | INFO     | current chi2=0.5322634170797691 (change=54.78485093770891 %)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,499 | INFO     | sum of square deviations: 20295325760.798965
[2025-10-12 23:32:44] 2025-10-13 03:31:38,503 | INFO     | sum of deviations: -121835693354.08926
[2025-10-12 23:32:44] 2025-10-13 03:31:38,503 | INFO     | mean x: 1760313971.0545905
[2025-10-12 23:32:44] 2025-10-13 03:31:38,503 | INFO     | mean y: 2572902.913151365
[2025-10-12 23:32:44] 2025-10-13 03:31:38,503 | INFO     | -- intersect: 10569985109.647951
[2025-10-12 23:32:44] 2025-10-13 03:31:38,503 | INFO     | intersect: 10569985109.647951
[2025-10-12 23:32:44] 2025-10-13 03:31:38,504 | INFO     | chi2: 0.5108103004490951
[2025-10-12 23:32:44] 2025-10-13 03:31:38,504 | INFO     | current chi2=0.5108103004490951 (change=4.030545016295723 %)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,504 | INFO     | left removable region: 30
[2025-10-12 23:32:44] 2025-10-13 03:31:38,505 | INFO     | sum of square deviations: 17285004578.743496
[2025-10-12 23:32:44] 2025-10-13 03:31:38,508 | INFO     | sum of deviations: -59231011261.81677
[2025-10-12 23:32:44] 2025-10-13 03:31:38,508 | INFO     | mean x: 1760314245.5445027
[2025-10-12 23:32:44] 2025-10-13 03:31:38,508 | INFO     | mean y: 2559868.7539267014
[2025-10-12 23:32:44] 2025-10-13 03:31:38,509 | INFO     | -- intersect: 6034678195.78085
[2025-10-12 23:32:44] 2025-10-13 03:31:38,509 | INFO     | intersect: 6034678195.78085
[2025-10-12 23:32:44] 2025-10-13 03:31:38,509 | INFO     | chi2: 0.3375470782065403
[2025-10-12 23:32:44] 2025-10-13 03:31:38,509 | INFO     | -- intersect: 6034678195.78085
[2025-10-12 23:32:44] 2025-10-13 03:31:38,509 | INFO     | current memory leak: -3.43 B/s (using 382 data points, chi2=0.34)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,511 | INFO     | could have reported an average CPU frequency of 3145 MHz (18 samples)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,511 | INFO     | ..............................
[2025-10-12 23:32:44] 2025-10-13 03:31:38,511 | INFO     | . Timing measurements:
[2025-10-12 23:32:44] 2025-10-13 03:31:38,511 | INFO     | . get job = 0 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,511 | INFO     | . initial setup = 8 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | . payload setup = 62 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | . stage-in = 0 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | . payload execution = 25512 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | . stage-out = 4 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | . log creation = 0 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,512 | INFO     | ..............................
[2025-10-12 23:32:44] 2025-10-13 03:31:38,666 | INFO     | 
[2025-10-12 23:32:44] 2025-10-13 03:31:38,693 | INFO     | job summary report
[2025-10-12 23:32:44] 2025-10-13 03:31:38,693 | INFO     | --------------------------------------------------
[2025-10-12 23:32:44] 2025-10-13 03:31:38,693 | INFO     | PanDA job id: 6840390885
[2025-10-12 23:32:44] 2025-10-13 03:31:38,693 | INFO     | task id: 46676269
[2025-10-12 23:32:44] 2025-10-13 03:31:38,693 | INFO     | errors: (none)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | pilot state: finished 
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | transexitcode: 0
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | exeerrorcode: 0
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | exeerrordiag: 
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | exitcode: 0
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | exitmsg: OK
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | cpuconsumptiontime: 37446 s
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | nevents: 400
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | neventsw: 0
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | pid: 3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | pgrp: 3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | corecount: 9
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | event service: False
[2025-10-12 23:32:44] 2025-10-13 03:31:38,694 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348913, 4: 2348941, 14: 2348969, 25: 2349125, 32: 2349415, 36: 2349443, 25579: 2385499, 25584: 2394497, 25586: 2394
[2025-10-12 23:32:44] 2025-10-13 03:31:38,695 | INFO     | --------------------------------------------------
[2025-10-12 23:32:44] 2025-10-13 03:31:38,695 | INFO     | 
[2025-10-12 23:32:44] 2025-10-13 03:31:38,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:32:44] 2025-10-13 03:31:38,890 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | job 6840390885 has completed (purged errors)
[2025-10-12 23:32:44] 2025-10-13 03:31:38,892 | INFO     | overall cleanup function is called
[2025-10-12 23:32:44] 2025-10-13 03:31:40,039 | INFO     | --- collectZombieJob: --- 10, [3137342]
[2025-10-12 23:32:44] 2025-10-13 03:31:40,039 | INFO     | zombie collector waiting for pid 3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:40,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:32:44] 2025-10-13 03:31:40,040 | INFO     | collected zombie processes
[2025-10-12 23:32:44] 2025-10-13 03:31:40,040 | INFO     | will attempt to kill all subprocesses of pid=3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:41,201 | INFO     | PID=3130178 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:32:44] 2025-10-13 03:31:41,201 | INFO     | .. there are 24 such processes running
[2025-10-12 23:32:44] 2025-10-13 03:31:41,281 | INFO     | process IDs to be killed: [3137342] (in reverse order)
[2025-10-12 23:32:44] 2025-10-13 03:31:41,787 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:32:44] 2025-10-13 03:31:41,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:32:44] 2025-10-13 03:31:41,815 | INFO     | did not find any defunct processes belonging to 3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:41,838 | INFO     | did not find any defunct processes belonging to 3137342
[2025-10-12 23:32:44] 2025-10-13 03:31:41,839 | INFO     | ready for new job
[2025-10-12 23:32:44] 2025-10-13 03:31:41,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:32:44] 2025-10-13 03:31:41,843 | INFO     | ***************************************
[2025-10-12 23:32:44] 2025-10-13 03:31:41,843 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:32:44] 2025-10-13 03:31:41,843 | INFO     | ***************************************
[2025-10-12 23:32:44] 2025-10-13 03:31:41,843 | INFO     | 
[2025-10-12 23:32:44] 2025-10-13 03:31:41,850 | INFO     | architecture information:
[2025-10-12 23:32:44] 2025-10-13 03:31:41,850 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:32:44] 2025-10-13 03:31:41,896 | INFO     | cat /etc/os-release:
[2025-10-12 23:32:44] NAME="CentOS Linux"
[2025-10-12 23:32:44] VERSION="7 (Core)"
[2025-10-12 23:32:44] ID="centos"
[2025-10-12 23:32:44] ID_LIKE="rhel fedora"
[2025-10-12 23:32:44] VERSION_ID="7"
[2025-10-12 23:32:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:32:44] ANSI_COLOR="0;31"
[2025-10-12 23:32:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:32:44] HOME_URL="https://www.centos.org/"
[2025-10-12 23:32:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:32:44] 
[2025-10-12 23:32:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:32:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:32:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:32:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:32:44] 
[2025-10-12 23:32:44] 2025-10-13 03:31:41,900 | INFO     | ***************************************
[2025-10-12 23:32:44] 2025-10-13 03:31:42,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:32:44] 2025-10-13 03:31:42,642 | INFO     | sufficient remaining disk space (127632670720 B)
[2025-10-12 23:32:44] 2025-10-13 03:31:42,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:32:44] 2025-10-13 03:31:42,645 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:32:44] 2025-10-13 03:31:42,645 | INFO     | update_server=False
[2025-10-12 23:32:44] 2025-10-13 03:31:42,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:32:44] 2025-10-13 03:31:42,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:32:44] 2025-10-13 03:31:42,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:32:44] 2025-10-13 03:31:42,663 | INFO     | aborting loop
[2025-10-12 23:32:44] 2025-10-13 03:31:42,961 | INFO     | all job control threads have been joined
[2025-10-12 23:32:44] 2025-10-13 03:31:43,516 | INFO     | all payload control threads have been joined
[2025-10-12 23:32:44] 2025-10-13 03:31:43,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:32:44] 2025-10-13 03:31:43,651 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,669 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,707 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,717 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,734 | INFO     | [job] validate thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,745 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:43,793 | INFO     | all data control threads have been joined
[2025-10-12 23:32:44] 2025-10-13 03:31:43,792 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,020 | INFO     | [job] control thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,522 | INFO     | [payload] control thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,570 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,629 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,638 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,652 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:44,799 | INFO     | [data] control thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:31:45,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:32:44] 2025-10-13 03:31:49,441 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:32:44] 2025-10-13 03:32:14,785 | INFO     | PID=3130178 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:32:44] 2025-10-13 03:32:14,785 | INFO     | .. there are 24 such processes running
[2025-10-12 23:32:44] 2025-10-13 03:32:14,786 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:32:44] 2025-10-13 03:32:14,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:32:44] 2025-10-13 03:32:14,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:32:44] 2025-10-13 03:32:37,086 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:32:44] 2025-10-13 03:32:38,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621227853632)>', '<ExcThread(monitor, started 139620954117888)>']
[2025-10-12 23:32:44] 2025-10-13 03:32:38,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:32:44] 2025-10-13 03:32:38,955 | INFO     | [monitor] control thread has ended
[2025-10-12 23:32:44] 2025-10-13 03:32:43,103 | INFO     | all workflow threads have been joined
[2025-10-12 23:32:44] 2025-10-13 03:32:43,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:32:44] 2025-10-13 03:32:43,103 | INFO     | traces error code: 0
[2025-10-12 23:32:44] 2025-10-13 03:32:43,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:32:44] 2025-10-13 03:32:43,488 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:32:44] 2025-10-13 03:32:43,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:32:44] 2025-10-13 03:32:43,499 [wrapper] pilotpid: 3130178
[2025-10-12 23:32:44] 2025-10-13 03:32:43,503 [wrapper] Pilot exit status: 0
[2025-10-12 23:32:44] 2025-10-13 03:32:43,532 [wrapper] pandaids: 6840390885
[2025-10-12 23:32:44] 2025-10-13 03:32:43,938 [wrapper] cleanup supervisor_pilot   61585 3130179
[2025-10-12 23:32:44] 2025-10-13 03:32:43,941 [wrapper] Test setup, not cleaning
[2025-10-12 23:32:44] 2025-10-13 03:32:43,943 [wrapper] apfmon messages muted
[2025-10-12 23:32:44] 2025-10-13 03:32:43,946 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:32:44] 2025-10-13 03:32:43,948 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:32:44]  *** Error codes and diagnostics ***
[2025-10-12 23:32:44]     "exeErrorCode": 0,
[2025-10-12 23:32:44]     "exeErrorDiag": "",
[2025-10-12 23:32:44]     "pilotErrorCode": 0,
[2025-10-12 23:32:44]     "pilotErrorDiag": "",
[2025-10-12 23:32:44]  *** Listing of results directory ***
[2025-10-12 23:32:44] total 408084
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 23:32:44] -rwx------. 1 boincer umatlas     36292 Oct 12 12:37 runpilot2-wrapper.sh
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:37 queuedata.json
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:32:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:22 run_atlas
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:22 job.xml
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas 223374255 Oct 12 16:22 EVNT.46676267._004748.pool.root.1
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:22 start_atlas.sh
[2025-10-12 23:32:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:22 shared
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 16:22 input.tar.gz
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:22 boinc_lockfile
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:22 pandaJob.out
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas    975536 Oct 12 16:23 agis_schedconf.cvmfs.json
[2025-10-12 23:32:44] drwx------. 5 boincer umatlas      4096 Oct 12 16:23 pilot3
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas      6947 Oct 12 23:30 init_data.xml
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas 182846287 Oct 12 23:30 HITS.46676269._083657.pool.root.1
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:30 boinc_task_state.xml
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas      1046 Oct 12 23:31 memory_monitor_summary.json
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas    632411 Oct 12 23:31 log.46676269._083657.job.log.tgz.1
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas        95 Oct 12 23:31 pilot_heartbeat.json
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas      7801 Oct 12 23:31 heartbeat.json
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:32 boinc_mmap_file
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:32 wrapper_checkpoint.txt
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas      4825 Oct 12 23:32 pilotlog.txt
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas   3244469 Oct 12 23:32 log.46676269._083657.job.log.1
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas       357 Oct 12 23:32 output.list
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:32 runtime_log
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas   3891200 Oct 12 23:32 result.tar.gz
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas       662 Oct 12 23:32 zsoKDmOFES8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDQUMDmONDWPm.diag
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 23:32 runtime_log.err
[2025-10-12 23:32:44] -rw-r--r--. 1 boincer umatlas     21154 Oct 12 23:32 stderr.txt
[2025-10-12 23:32:44] HITS file was successfully produced:
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas 182846287 Oct 12 23:30 shared/HITS.pool.root.1
[2025-10-12 23:32:44]  *** Contents of shared directory: ***
[2025-10-12 23:32:44] total 401088
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas 223374255 Oct 12 16:22 ATLAS.root_0
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:22 start_atlas.sh
[2025-10-12 23:32:44] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 16:22 input.tar.gz
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas 182846287 Oct 12 23:30 HITS.pool.root.1
[2025-10-12 23:32:44] -rw-------. 1 boincer umatlas   3891200 Oct 12 23:32 result.tar.gz
23:32:45 (3124802): run_atlas exited; CPU time 38260.032947
23:32:45 (3124802): called boinc_finish(0)

</stderr_txt>
]]>

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