Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:31 (2858995): wrapper (7.7.26015): starting
19:55:31 (2858995): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 19:55:31] Arguments: --nthreads 9
[2025-10-12 19:55:31] Threads: 9
[2025-10-12 19:55:31] Checking for CVMFS
[2025-10-12 19:55:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:55:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:55:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:55:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:55:31] 2.13.2.0 159327 94018 365748 151641 2 64 34609599 39288833 6440 16776704 1 88831621 99.609 97335666 36056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:55:31] CVMFS is ok
[2025-10-12 19:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:55:31] Further information can be found at the LHC@home message board.
[2025-10-12 19:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:55:31] Checking for apptainer binary...
[2025-10-12 19:55:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:55:31] Running /usr/bin/apptainer --version
[2025-10-12 19:55:31] apptainer version 1.4.3-1.el9
[2025-10-12 19:55:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:55:31] c-210-30.aglt2.org
[2025-10-12 19:55:31] apptainer works
[2025-10-12 19:55:31] Set ATHENA_PROC_NUMBER=9
[2025-10-12 19:55:31] Set ATHENA_CORE_NUMBER=9
[2025-10-12 19:55:31] Starting ATLAS job with PandaID=6840537061
[2025-10-12 19:55:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:41:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:41:02] 2025-10-13 01:40:18,318 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:41:02] 2025-10-13 01:40:18,318 | INFO     | sum of square deviations: 338832705.92233014
[2025-10-12 21:41:02] 2025-10-13 01:40:18,318 | INFO     | sum of deviations: -6631702141.436892
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | mean x: 1760316484.262136
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | mean y: 2598693.349514563
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | -- intersect: 34455868387.34372
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | intersect: 34455868387.34372
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | chi2: 2.2184468379326523
[2025-10-12 21:41:02] 2025-10-13 01:40:18,319 | INFO     | sum of square deviations: 291854013.0612237
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | sum of deviations: 382895608.9795918
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | mean x: 1760316331.7755103
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | mean y: 2620618.9081632653
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | -- intersect: -2306812740.538271
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | intersect: -2306812740.538271
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | chi2: 1.5485464173232555
[2025-10-12 21:41:02] 2025-10-13 01:40:18,320 | INFO     | current chi2=1.5485464173232555 (change=30.196820999040487 %)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | sum of square deviations: 249433545.1612902
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | sum of deviations: 641047812.9354857
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | mean x: 1760316179.2903225
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | mean y: 2621547.8172043012
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | -- intersect: -4521416452.281494
[2025-10-12 21:41:02] 2025-10-13 01:40:18,321 | INFO     | intersect: -4521416452.281494
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | chi2: 1.5506983209991
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | current chi2=1.5506983209991 (change=-0.13896281388608892 %)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | right removable region: 92
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | sum of square deviations: 291837543.0612237
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | sum of deviations: -20715965090.653057
[2025-10-12 21:41:02] 2025-10-13 01:40:18,322 | INFO     | mean x: 1760316636.7755103
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | mean y: 2643220.06122449
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | -- intersect: 124957978347.3414
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | intersect: 124957978347.3414
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | chi2: 0.8727671942333272
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | current chi2=0.8727671942333272 (change=60.65863831802929 %)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,323 | INFO     | sum of square deviations: 249400605.1612902
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | sum of deviations: -17240623166.580635
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | mean x: 1760316789.2903225
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | mean y: 2630553.688172043
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | -- intersect: 121690219877.42924
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | intersect: 121690219877.42924
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | chi2: 0.8580166133461096
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | current chi2=0.8580166133461096 (change=1.6900934160541035 %)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,324 | INFO     | left removable region: 20
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | sum of square deviations: 115724592.6111112
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | sum of deviations: -1252696488.5000014
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | mean x: 1760316758.8611112
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | mean y: 2614485.25
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | -- intersect: 19057705306.639442
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | intersect: 19057705306.639442
[2025-10-12 21:41:02] 2025-10-13 01:40:18,325 | INFO     | chi2: 0.04502979900020722
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | -- intersect: 19057705306.639442
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | current memory leak: -10.82 B/s (using 72 data points, chi2=0.05)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | could have reported an average CPU frequency of 2608 MHz (7 samples)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | ..............................
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | . Timing measurements:
[2025-10-12 21:41:02] 2025-10-13 01:40:18,326 | INFO     | . get job = 0 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . initial setup = 2 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . payload setup = 6 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . stage-in = 0 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . payload execution = 6240 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . stage-out = 0 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | . log creation = 0 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,327 | INFO     | ..............................
[2025-10-12 21:41:02] 2025-10-13 01:40:18,701 | INFO     | 
[2025-10-12 21:41:02] 2025-10-13 01:40:18,701 | INFO     | job summary report
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | --------------------------------------------------
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | PanDA job id: 6840537061
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | task id: 46676269
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | errors: (none)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | pilot state: finished 
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | transexitcode: 0
[2025-10-12 21:41:02] 2025-10-13 01:40:18,702 | INFO     | exeerrorcode: 0
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | exeerrordiag: 
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | exitcode: 0
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | exitmsg: OK
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | cpuconsumptiontime: 48288 s
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | nevents: 400
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | neventsw: 0
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | pid: 2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | pgrp: 2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | corecount: 9
[2025-10-12 21:41:02] 2025-10-13 01:40:18,703 | INFO     | event service: False
[2025-10-12 21:41:02] 2025-10-13 01:40:18,704 | INFO     | sizes: {0: 2348684, 1: 2348883, 5: 2349145, 11: 2349201, 6250: 2375956, 6252: 2385138, 6257: 2385276}
[2025-10-12 21:41:02] 2025-10-13 01:40:18,704 | INFO     | --------------------------------------------------
[2025-10-12 21:41:02] 2025-10-13 01:40:18,704 | INFO     | 
[2025-10-12 21:41:02] 2025-10-13 01:40:18,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:41:02] 2025-10-13 01:40:18,726 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,726 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:41:02] 2025-10-13 01:40:18,729 | INFO     | job 6840537061 has completed (purged errors)
[2025-10-12 21:41:02] 2025-10-13 01:40:18,729 | INFO     | overall cleanup function is called
[2025-10-12 21:41:02] 2025-10-13 01:40:19,737 | INFO     | --- collectZombieJob: --- 10, [2869181]
[2025-10-12 21:41:02] 2025-10-13 01:40:19,737 | INFO     | zombie collector waiting for pid 2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:19,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:41:02] 2025-10-13 01:40:19,738 | INFO     | collected zombie processes
[2025-10-12 21:41:02] 2025-10-13 01:40:19,738 | INFO     | will attempt to kill all subprocesses of pid=2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:19,940 | INFO     | process IDs to be killed: [2869181] (in reverse order)
[2025-10-12 21:41:02] 2025-10-13 01:40:19,990 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:41:02] 2025-10-13 01:40:19,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:41:02] 2025-10-13 01:40:19,996 | INFO     | did not find any defunct processes belonging to 2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:20,001 | INFO     | did not find any defunct processes belonging to 2869181
[2025-10-12 21:41:02] 2025-10-13 01:40:20,001 | INFO     | ready for new job
[2025-10-12 21:41:02] 2025-10-13 01:40:20,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:41:02] 2025-10-13 01:40:20,003 | INFO     | ***************************************
[2025-10-12 21:41:02] 2025-10-13 01:40:20,003 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:41:02] 2025-10-13 01:40:20,003 | INFO     | ***************************************
[2025-10-12 21:41:02] 2025-10-13 01:40:20,003 | INFO     | 
[2025-10-12 21:41:02] 2025-10-13 01:40:20,004 | INFO     | architecture information:
[2025-10-12 21:41:02] 2025-10-13 01:40:20,005 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:41:02] 2025-10-13 01:40:20,016 | INFO     | cat /etc/os-release:
[2025-10-12 21:41:02] NAME="CentOS Linux"
[2025-10-12 21:41:02] VERSION="7 (Core)"
[2025-10-12 21:41:02] ID="centos"
[2025-10-12 21:41:02] ID_LIKE="rhel fedora"
[2025-10-12 21:41:02] VERSION_ID="7"
[2025-10-12 21:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:41:02] ANSI_COLOR="0;31"
[2025-10-12 21:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:41:02] HOME_URL="https://www.centos.org/"
[2025-10-12 21:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:41:02] 
[2025-10-12 21:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:41:02] 
[2025-10-12 21:41:02] 2025-10-13 01:40:20,017 | INFO     | ***************************************
[2025-10-12 21:41:02] 2025-10-13 01:40:20,519 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:41:02] 2025-10-13 01:40:20,532 | INFO     | sufficient remaining disk space (52663681024 B)
[2025-10-12 21:41:02] 2025-10-13 01:40:20,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:41:02] 2025-10-13 01:40:20,533 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:41:02] 2025-10-13 01:40:20,533 | INFO     | update_server=False
[2025-10-12 21:41:02] 2025-10-13 01:40:20,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:41:02] 2025-10-13 01:40:20,720 | INFO     | all payload control threads have been joined
[2025-10-12 21:41:02] 2025-10-13 01:40:20,822 | INFO     | all job control threads have been joined
[2025-10-12 21:41:02] 2025-10-13 01:40:20,853 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:41:02] 2025-10-13 01:40:20,853 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:41:02] 2025-10-13 01:40:20,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:02] 2025-10-13 01:40:20,854 | INFO     | will abort loop
[2025-10-12 21:41:02] 2025-10-13 01:40:20,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:41:02] 2025-10-13 01:40:21,227 | INFO     | all data control threads have been joined
[2025-10-12 21:41:02] 2025-10-13 01:40:21,538 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:21,609 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:21,725 | INFO     | [payload] control thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:21,827 | INFO     | [job] control thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:21,858 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:21,894 | INFO     | [job] validate thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,229 | INFO     | [data] control thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,351 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,753 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,792 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,850 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:22,905 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:23,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:02] 2025-10-13 01:40:23,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:41:02] 2025-10-13 01:40:24,410 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:27,521 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:41:02] 2025-10-13 01:40:41,656 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-12 21:41:02] 2025-10-13 01:40:50,467 | INFO     | PID=2862769 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:41:02] 2025-10-13 01:40:50,467 | INFO     | .. there are 6 such processes running
[2025-10-12 21:41:02] 2025-10-13 01:40:50,468 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:41:02] 2025-10-13 01:40:50,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:41:02] 2025-10-13 01:40:50,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:41:02] 2025-10-13 01:40:55,133 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:41:02] 2025-10-13 01:40:56,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548030973760)>', '<ExcThread(monitor, started 140547083720448)>']
[2025-10-12 21:41:02] 2025-10-13 01:40:57,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:41:02] 2025-10-13 01:40:57,503 | INFO     | [monitor] control thread has ended
[2025-10-12 21:41:02] 2025-10-13 01:41:01,912 | INFO     | all workflow threads have been joined
[2025-10-12 21:41:02] 2025-10-13 01:41:01,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:41:02] 2025-10-13 01:41:01,913 | INFO     | traces error code: 0
[2025-10-12 21:41:02] 2025-10-13 01:41:01,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:41:02] 2025-10-13 01:41:02,076 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:41:02] 2025-10-13 01:41:02,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:41:02] 2025-10-13 01:41:02,083 [wrapper] pilotpid: 2862769
[2025-10-12 21:41:02] 2025-10-13 01:41:02,086 [wrapper] Pilot exit status: 0
[2025-10-12 21:41:02] 2025-10-13 01:41:02,097 [wrapper] pandaids: 6840537061
[2025-10-12 21:41:02] 2025-10-13 01:41:02,143 [wrapper] cleanup supervisor_pilot 3002337 2862770
[2025-10-12 21:41:02] 2025-10-13 01:41:02,147 [wrapper] Test setup, not cleaning
[2025-10-12 21:41:02] 2025-10-13 01:41:02,150 [wrapper] apfmon messages muted
[2025-10-12 21:41:02] 2025-10-13 01:41:02,153 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:41:02] 2025-10-13 01:41:02,156 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:41:02]  *** Error codes and diagnostics ***
[2025-10-12 21:41:02]     "exeErrorCode": 0,
[2025-10-12 21:41:02]     "exeErrorDiag": "",
[2025-10-12 21:41:02]     "pilotErrorCode": 0,
[2025-10-12 21:41:02]     "pilotErrorDiag": "",
[2025-10-12 21:41:02]  *** Listing of results directory ***
[2025-10-12 21:41:02] total 406460
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:45 queuedata.json
[2025-10-12 21:41:02] -rwx------. 1 boincer umatlas     36292 Oct 12 14:46 runpilot2-wrapper.sh
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:41:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:55 run_atlas
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:55 job.xml
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas 220990140 Oct 12 19:55 EVNT.46676267._004419.pool.root.1
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 19:55 input.tar.gz
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:55 start_atlas.sh
[2025-10-12 21:41:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:55 shared
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:55 boinc_lockfile
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 19:55 pandaJob.out
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas    975603 Oct 12 19:55 agis_schedconf.cvmfs.json
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:41:02] drwx------. 5 boincer umatlas      4096 Oct 12 19:55 pilot3
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas 188821370 Oct 12 21:39 HITS.46676269._086480.pool.root.1
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas       529 Oct 12 21:39 boinc_task_state.xml
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas      1037 Oct 12 21:40 memory_monitor_summary.json
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas    354040 Oct 12 21:40 log.46676269._086480.job.log.tgz.1
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas      6658 Oct 12 21:40 init_data.xml
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas      7817 Oct 12 21:40 heartbeat.json
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas        95 Oct 12 21:40 pilot_heartbeat.json
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:40 boinc_mmap_file
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:41 wrapper_checkpoint.txt
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas      5009 Oct 12 21:41 pilotlog.txt
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas    896517 Oct 12 21:41 log.46676269._086480.job.log.1
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas       357 Oct 12 21:41 output.list
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:41 runtime_log
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas   1269760 Oct 12 21:41 result.tar.gz
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 21:41 runtime_log.err
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas       653 Oct 12 21:41 CAFNDmTGGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt8kNDme1pcDm.diag
[2025-10-12 21:41:02] -rw-r--r--. 1 boincer umatlas     20977 Oct 12 21:41 stderr.txt
[2025-10-12 21:41:02] HITS file was successfully produced:
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas 188821370 Oct 12 21:39 shared/HITS.pool.root.1
[2025-10-12 21:41:02]  *** Contents of shared directory: ***
[2025-10-12 21:41:02] total 402032
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas 220990140 Oct 12 19:55 ATLAS.root_0
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 19:55 input.tar.gz
[2025-10-12 21:41:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:55 start_atlas.sh
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas 188821370 Oct 12 21:39 HITS.pool.root.1
[2025-10-12 21:41:02] -rw-------. 1 boincer umatlas   1269760 Oct 12 21:41 result.tar.gz
21:41:03 (2858995): run_atlas exited; CPU time 48299.678749
21:41:03 (2858995): called boinc_finish(0)

</stderr_txt>
]]>

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