Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:58 (20234): wrapper (7.7.26015): starting
16:20:58 (20234): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 16:20:58] Arguments: --nthreads 12
[2025-10-12 16:20:58] Threads: 12
[2025-10-12 16:20:58] Checking for CVMFS
[2025-10-12 16:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:20:59] 2.11.2.0 2925 223355 100964 151636 2 56 16591160 20275201 1 130560 1 110507125 99.984 13316372 12643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:20:59] CVMFS is ok
[2025-10-12 16:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:20:59] Further information can be found at the LHC@home message board.
[2025-10-12 16:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:20:59] Checking for apptainer binary...
[2025-10-12 16:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:20:59] Running /usr/bin/apptainer --version
[2025-10-12 16:20:59] apptainer version 1.3.2-1.el7
[2025-10-12 16:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:21:00] c-205-9.aglt2.org
[2025-10-12 16:21:00] apptainer works
[2025-10-12 16:21:00] Set ATHENA_PROC_NUMBER=12
[2025-10-12 16:21:00] Set ATHENA_CORE_NUMBER=12
[2025-10-12 16:21:00] Starting ATLAS job with PandaID=6840392448
[2025-10-12 16:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:33:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:33:40]  scope=mc23_13p6TeV
[2025-10-12 17:33:40]  status=None
[2025-10-12 17:33:40]  status_code=0
[2025-10-12 17:33:40]  storage_token=
[2025-10-12 17:33:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840392448/log.46676269._083909.job.log.tgz.1
[2025-10-12 17:33:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/92/log.46676269._083909.job.log.tgz.1
[2025-10-12 17:33:40]  workdir=None
[2025-10-12 17:33:40] ]
[2025-10-12 17:33:40] 2025-10-12 21:32:59,620 | INFO     | transferring file log.46676269._083909.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840392448/log.46676269._083909.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 17:33:40] 2025-10-12 21:32:59,620 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840392448/log.46676269._083909.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._083909.job
[2025-10-12 17:33:40] 2025-10-12 21:32:59,643 | INFO     | adding to output.list: log.46676269._083909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/92/log.46676269._083909.job.log.tg
[2025-10-12 17:33:40] 2025-10-12 21:32:59,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 17:33:40] 2025-10-12 21:32:59,644 | INFO     | summary of transferred files:
[2025-10-12 17:33:40] 2025-10-12 21:32:59,645 | INFO     |  -- lfn=log.46676269._083909.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 17:33:40] 2025-10-12 21:32:59,645 | INFO     | stage-out finished correctly
[2025-10-12 17:33:40] 2025-10-12 21:33:00,598 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 17:33:40] 2025-10-12 21:33:00,680 | INFO     | time since job start (4304s) is within the limit (172800.0s)
[2025-10-12 17:33:40] 2025-10-12 21:33:01,427 | INFO     | monitor loop #320: job 0:6840392448 is in state 'finished'
[2025-10-12 17:33:40] 2025-10-12 21:33:01,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:33:40] 2025-10-12 21:33:01,799 | INFO     | PID=23956 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:33:40] 2025-10-12 21:33:02,141 | INFO     | job 6840392448 has state=finished
[2025-10-12 17:33:40] 2025-10-12 21:33:02,141 | INFO     | preparing for final server update for job 6840392448 in state='finished'
[2025-10-12 17:33:40] 2025-10-12 21:33:02,142 | INFO     | this job has now completed (state=finished)
[2025-10-12 17:33:40] 2025-10-12 21:33:02,142 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 17:33:40] 2025-10-12 21:33:02,142 | INFO     | log transfer has been attempted: DONE
[2025-10-12 17:33:40] 2025-10-12 21:33:02,142 | INFO     | job 6840392448 has finished - writing final server update
[2025-10-12 17:33:40] 2025-10-12 21:33:02,143 | INFO     | total number of processed events: 400 (read)
[2025-10-12 17:33:40] 2025-10-12 21:33:02,144 | INFO     | executing command: lscpu
[2025-10-12 17:33:40] 2025-10-12 21:33:02,171 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 17:33:40] 2025-10-12 21:33:02,808 | INFO     | time since job start (4306s) is within the limit (172800.0s)
[2025-10-12 17:33:40] 2025-10-12 21:33:03,930 | INFO     | monitor loop #321: job 0:6840392448 is in state 'finished'
[2025-10-12 17:33:40] 2025-10-12 21:33:03,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:33:40] 2025-10-12 21:33:04,813 | INFO     | time since job start (4308s) is within the limit (172800.0s)
[2025-10-12 17:33:40] 2025-10-12 21:33:06,432 | INFO     | monitor loop #322: job 0:6840392448 is in state 'finished'
[2025-10-12 17:33:40] 2025-10-12 21:33:06,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:33:40] 2025-10-12 21:33:06,818 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,109 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 17:33:40] 2025-10-12 21:33:08,113 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 17:33:40] 2025-10-12 21:33:08,116 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840392448/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,117 | INFO     | extracted standard info from prmon json
[2025-10-12 17:33:40] 2025-10-12 21:33:08,117 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:33:40] 2025-10-12 21:33:08,117 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:33:40] 2025-10-12 21:33:08,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:33:40] 2025-10-12 21:33:08,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:33:40] 2025-10-12 21:33:08,119 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | sum of deviations: -4867924806.0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | mean x: 1760302731.5
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | mean y: 2881411.0625
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | -- intersect: 105446164568.06773
[2025-10-12 17:33:40] 2025-10-12 21:33:08,120 | INFO     | intersect: 105446164568.06773
[2025-10-12 17:33:40] 2025-10-12 21:33:08,121 | INFO     | chi2: 0.10851305253200605
[2025-10-12 17:33:40] 2025-10-12 21:33:08,121 | INFO     | -- intersect: 105446164568.06773
[2025-10-12 17:33:40] 2025-10-12 21:33:08,121 | INFO     | current memory leak: -59.90 B/s (using 64 data points, chi2=0.11)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,121 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,121 | INFO     | ..............................
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . Timing measurements:
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . get job = 0 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . initial setup = 2 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . payload setup = 7 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . stage-in = 0 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . payload execution = 4276 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . stage-out = 0 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | . log creation = 0 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,122 | INFO     | ..............................
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | 
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | job summary report
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | --------------------------------------------------
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | PanDA job id: 6840392448
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | task id: 46676269
[2025-10-12 17:33:40] 2025-10-12 21:33:08,205 | INFO     | errors: (none)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | pilot state: finished 
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | transexitcode: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | exeerrorcode: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | exeerrordiag: 
[2025-10-12 17:33:40] 2025-10-12 21:33:08,206 | INFO     | exitcode: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | exitmsg: OK
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | cpuconsumptiontime: 45497 s
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | nevents: 400
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | neventsw: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | pid: 30999
[2025-10-12 17:33:40] 2025-10-12 21:33:08,207 | INFO     | pgrp: 30999
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | corecount: 12
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | event service: False
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 12: 2349175, 4287: 2375195, 4288: 2384193, 4289: 2384377, 4296: 2384571}
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | --------------------------------------------------
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | 
[2025-10-12 17:33:40] 2025-10-12 21:33:08,208 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:33:40] 2025-10-12 21:33:08,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:33:40] 2025-10-12 21:33:08,235 | INFO     | job 6840392448 has completed (purged errors)
[2025-10-12 17:33:40] 2025-10-12 21:33:08,235 | INFO     | overall cleanup function is called
[2025-10-12 17:33:40] 2025-10-12 21:33:09,244 | INFO     | --- collectZombieJob: --- 10, [30999]
[2025-10-12 17:33:40] 2025-10-12 21:33:09,244 | INFO     | zombie collector waiting for pid 30999
[2025-10-12 17:33:40] 2025-10-12 21:33:09,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:33:40] 2025-10-12 21:33:09,244 | INFO     | collected zombie processes
[2025-10-12 17:33:40] 2025-10-12 21:33:09,244 | INFO     | will attempt to kill all subprocesses of pid=30999
[2025-10-12 17:33:40] 2025-10-12 21:33:09,335 | INFO     | process IDs to be killed: [30999] (in reverse order)
[2025-10-12 17:33:40] 2025-10-12 21:33:09,439 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:33:40] 2025-10-12 21:33:09,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:33:40] 2025-10-12 21:33:09,444 | INFO     | did not find any defunct processes belonging to 30999
[2025-10-12 17:33:40] 2025-10-12 21:33:09,447 | INFO     | did not find any defunct processes belonging to 30999
[2025-10-12 17:33:40] 2025-10-12 21:33:09,448 | INFO     | ready for new job
[2025-10-12 17:33:40] 2025-10-12 21:33:09,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:33:40] 2025-10-12 21:33:09,449 | INFO     | ***************************************
[2025-10-12 17:33:40] 2025-10-12 21:33:09,449 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:33:40] 2025-10-12 21:33:09,449 | INFO     | ***************************************
[2025-10-12 17:33:40] 2025-10-12 21:33:09,449 | INFO     | 
[2025-10-12 17:33:40] 2025-10-12 21:33:09,450 | INFO     | architecture information:
[2025-10-12 17:33:40] 2025-10-12 21:33:09,451 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:33:40] 2025-10-12 21:33:09,465 | INFO     | cat /etc/os-release:
[2025-10-12 17:33:40] NAME="CentOS Linux"
[2025-10-12 17:33:40] VERSION="7 (Core)"
[2025-10-12 17:33:40] ID="centos"
[2025-10-12 17:33:40] ID_LIKE="rhel fedora"
[2025-10-12 17:33:40] VERSION_ID="7"
[2025-10-12 17:33:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:33:40] ANSI_COLOR="0;31"
[2025-10-12 17:33:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:33:40] HOME_URL="https://www.centos.org/"
[2025-10-12 17:33:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:33:40] 
[2025-10-12 17:33:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:33:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:33:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:33:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:33:40] 
[2025-10-12 17:33:40] 2025-10-12 21:33:09,465 | INFO     | ***************************************
[2025-10-12 17:33:40] 2025-10-12 21:33:09,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:33:40] 2025-10-12 21:33:09,985 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-10-12 17:33:40] 2025-10-12 21:33:09,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:33:40] 2025-10-12 21:33:09,985 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:33:40] 2025-10-12 21:33:09,985 | INFO     | update_server=False
[2025-10-12 17:33:40] 2025-10-12 21:33:09,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:33:40] 2025-10-12 21:33:09,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:33:40] 2025-10-12 21:33:09,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:33:40] 2025-10-12 21:33:09,986 | INFO     | aborting loop
[2025-10-12 17:33:40] 2025-10-12 21:33:10,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:33:40] 2025-10-12 21:33:10,474 | INFO     | all job control threads have been joined
[2025-10-12 17:33:40] 2025-10-12 21:33:10,664 | INFO     | all payload control threads have been joined
[2025-10-12 17:33:40] 2025-10-12 21:33:10,834 | INFO     | all data control threads have been joined
[2025-10-12 17:33:40] 2025-10-12 21:33:10,991 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:10,992 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:10,992 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,022 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:33:40] 2025-10-12 21:33:11,222 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,479 | INFO     | [job] control thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,504 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,669 | INFO     | [payload] control thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,683 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,713 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:11,835 | INFO     | [data] control thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:12,164 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:12,248 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:12,423 | INFO     | [job] validate thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:15,189 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:20,932 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:33:40] 2025-10-12 21:33:21,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:33:40] 2025-10-12 21:33:22,481 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:33:40] 2025-10-12 21:33:24,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183901538112)>', '<ExcThread(monitor, started 140182917453568)>']
[2025-10-12 17:33:40] 2025-10-12 21:33:29,260 | INFO     | all workflow threads have been joined
[2025-10-12 17:33:40] 2025-10-12 21:33:29,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:33:40] 2025-10-12 21:33:29,260 | INFO     | traces error code: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:29,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:33:40] 2025-10-12 21:33:40,024 | INFO     | PID=23956 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:33:40] 2025-10-12 21:33:40,025 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:33:40] 2025-10-12 21:33:40,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:33:40] 2025-10-12 21:33:40,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:33:40] 2025-10-12 21:33:40,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:33:40] 2025-10-12 21:33:40,026 | INFO     | [monitor] control thread has ended
[2025-10-12 17:33:40] 2025-10-12 21:33:40,110 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:33:40] 2025-10-12 21:33:40,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:33:40] 2025-10-12 21:33:40,117 [wrapper] pilotpid: 23956
[2025-10-12 17:33:40] 2025-10-12 21:33:40,121 [wrapper] Pilot exit status: 0
[2025-10-12 17:33:40] 2025-10-12 21:33:40,138 [wrapper] pandaids: 6840392448
[2025-10-12 17:33:40] 2025-10-12 21:33:40,177 [wrapper] cleanup supervisor_pilot  9776 23957
[2025-10-12 17:33:40] 2025-10-12 21:33:40,181 [wrapper] Test setup, not cleaning
[2025-10-12 17:33:40] 2025-10-12 21:33:40,186 [wrapper] apfmon messages muted
[2025-10-12 17:33:40] 2025-10-12 21:33:40,190 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:33:40] 2025-10-12 21:33:40,194 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:33:40]  *** Error codes and diagnostics ***
[2025-10-12 17:33:40]     "exeErrorCode": 0,
[2025-10-12 17:33:40]     "exeErrorDiag": "",
[2025-10-12 17:33:40]     "pilotErrorCode": 0,
[2025-10-12 17:33:40]     "pilotErrorDiag": "",
[2025-10-12 17:33:40]  *** Listing of results directory ***
[2025-10-12 17:33:40] total 411056
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:47 queuedata.json
[2025-10-12 17:33:40] -rwx------ 1 boincer umatlas     36292 Oct 12 12:47 runpilot2-wrapper.sh
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:33:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 16:20 run_atlas
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 16:20 job.xml
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas 221060547 Oct 12 16:20 EVNT.46676267._004783.pool.root.1
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:20 start_atlas.sh
[2025-10-12 17:33:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 16:20 shared
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 16:20 input.tar.gz
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 16:20 boinc_lockfile
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 16:21 pandaJob.out
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas    975536 Oct 12 16:21 agis_schedconf.cvmfs.json
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas   1560580 Oct 12 16:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:33:40] drwx------ 5 boincer umatlas      4096 Oct 12 16:21 pilot3
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 17:31 init_data.xml
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas 193915327 Oct 12 17:32 HITS.46676269._083909.pool.root.1
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 17:32 boinc_task_state.xml
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas      1049 Oct 12 17:32 memory_monitor_summary.json
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas    393853 Oct 12 17:32 log.46676269._083909.job.log.tgz.1
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas      7855 Oct 12 17:33 heartbeat.json
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:33 boinc_mmap_file
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 17:33 wrapper_checkpoint.txt
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas       745 Oct 12 17:33 pilotlog.txt
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas        95 Oct 12 17:33 pilot_heartbeat.json
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas    627775 Oct 12 17:33 log.46676269._083909.job.log.1
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas       357 Oct 12 17:33 output.list
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:33 runtime_log
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas   1044480 Oct 12 17:33 result.tar.gz
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas       658 Oct 12 17:33 u3pNDmLPES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaikNDm8lhx3n.diag
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 17:33 runtime_log.err
[2025-10-12 17:33:40] -rw-r--r-- 1 boincer umatlas     21998 Oct 12 17:33 stderr.txt
[2025-10-12 17:33:40] HITS file was successfully produced:
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas 193915327 Oct 12 17:32 shared/HITS.pool.root.1
[2025-10-12 17:33:40]  *** Contents of shared directory: ***
[2025-10-12 17:33:40] total 406852
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas 221060547 Oct 12 16:20 ATLAS.root_0
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 16:20 start_atlas.sh
[2025-10-12 17:33:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 16:20 input.tar.gz
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas 193915327 Oct 12 17:32 HITS.pool.root.1
[2025-10-12 17:33:40] -rw------- 1 boincer umatlas   1044480 Oct 12 17:33 result.tar.gz
17:33:41 (20234): run_atlas exited; CPU time 45476.595340
17:33:41 (20234): called boinc_finish(0)

</stderr_txt>
]]>

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