Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:00:27 (842061): wrapper (7.7.26015): starting
18:00:27 (842061): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:00:27] Arguments: --nthreads 8
[2025-10-12 18:00:27] Threads: 8
[2025-10-12 18:00:27] Checking for CVMFS
[2025-10-12 18:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:00:28] 2.13.2.0 5032 6252 133452 151638 0 217 25050409 40960001 32047 16776704 0 28424718 99.748 17896905 27647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:00:28] CVMFS is ok
[2025-10-12 18:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:00:28] Further information can be found at the LHC@home message board.
[2025-10-12 18:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:00:28] Checking for apptainer binary...
[2025-10-12 18:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:00:28] Running /usr/bin/apptainer --version
[2025-10-12 18:00:28] apptainer version 1.4.3-1.el9
[2025-10-12 18:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:00:28] c-212-10.aglt2.org
[2025-10-12 18:00:28] apptainer works
[2025-10-12 18:00:28] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:00:28] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:00:28] Starting ATLAS job with PandaID=6840390092
[2025-10-12 18:00:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:27:19]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:27:19] 2025-10-13 00:26:38,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:27:19] 2025-10-13 00:26:38,815 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:27:19] 2025-10-13 00:26:38,816 | INFO     | sum of square deviations: 906721477.1188798
[2025-10-12 20:27:19] 2025-10-13 00:26:38,816 | INFO     | sum of deviations: 16373495259.461546
[2025-10-12 20:27:19] 2025-10-13 00:26:38,816 | INFO     | mean x: 1760310835.2027972
[2025-10-12 20:27:19] 2025-10-13 00:26:38,816 | INFO     | mean y: 2441883.846153846
[2025-10-12 20:27:19] 2025-10-13 00:26:38,816 | INFO     | -- intersect: -31785093586.203045
[2025-10-12 20:27:19] 2025-10-13 00:26:38,817 | INFO     | intersect: -31785093586.203045
[2025-10-12 20:27:19] 2025-10-13 00:26:38,817 | INFO     | chi2: 2.389289380156867
[2025-10-12 20:27:19] 2025-10-13 00:26:38,817 | INFO     | sum of square deviations: 814905344.4057965
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | sum of deviations: 24953611306.086952
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | mean x: 1760310682.710145
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | mean y: 2455690.652173913
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | -- intersect: -53900870451.270546
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | intersect: -53900870451.270546
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | chi2: 1.6199729193946728
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | current chi2=1.6199729193946728 (change=32.19854686298758 %)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,818 | INFO     | sum of square deviations: 729507936.6766943
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | sum of deviations: 23971313476.5564
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | mean x: 1760310530.218045
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | mean y: 2453936.6015037596
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | -- intersect: -57840584383.406456
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | intersect: -57840584383.406456
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | chi2: 1.6212919435685653
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | current chi2=1.6212919435685653 (change=-0.08142260639674068 %)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,819 | INFO     | right removable region: 132
[2025-10-12 20:27:19] 2025-10-13 00:26:38,820 | INFO     | sum of square deviations: 814887654.4057965
[2025-10-12 20:27:19] 2025-10-13 00:26:38,820 | INFO     | sum of deviations: -8353251625.202898
[2025-10-12 20:27:19] 2025-10-13 00:26:38,820 | INFO     | mean x: 1760310987.710145
[2025-10-12 20:27:19] 2025-10-13 00:26:38,820 | INFO     | mean y: 2482483.144927536
[2025-10-12 20:27:19] 2025-10-13 00:26:38,820 | INFO     | -- intersect: 18047081072.22829
[2025-10-12 20:27:19] 2025-10-13 00:26:38,821 | INFO     | intersect: 18047081072.22829
[2025-10-12 20:27:19] 2025-10-13 00:26:38,821 | INFO     | chi2: 0.8287784461556493
[2025-10-12 20:27:19] 2025-10-13 00:26:38,821 | INFO     | current chi2=0.8287784461556493 (change=65.31276399423679 %)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,821 | INFO     | sum of square deviations: 729472556.6766943
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | sum of deviations: -9306870137.481203
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | mean x: 1760311140.218045
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | mean y: 2484082.5338345864
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | -- intersect: 22461159235.726513
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | intersect: 22461159235.726513
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | chi2: 0.8084950848982192
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | current chi2=0.8084950848982192 (change=2.4473804008195454 %)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | left removable region: 20
[2025-10-12 20:27:19] 2025-10-13 00:26:38,822 | INFO     | sum of square deviations: 435612070.49107105
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | sum of deviations: 974404518.5178574
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | mean x: 1760311109.7589285
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | mean y: 2497253.9821428573
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | -- intersect: -3935077518.4814744
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | intersect: -3935077518.4814744
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | chi2: 0.0004740159507806051
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | -- intersect: -3935077518.4814744
[2025-10-12 20:27:19] 2025-10-13 00:26:38,823 | INFO     | current memory leak: 2.24 B/s (using 112 data points, chi2=0.00)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | could have reported an average CPU frequency of 2998 MHz (8 samples)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | ..............................
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . Timing measurements:
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . get job = 0 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . initial setup = 3 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . payload setup = 19 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . stage-in = 0 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . payload execution = 8678 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,824 | INFO     | . stage-out = 2 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,825 | INFO     | . log creation = 0 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,825 | INFO     | ..............................
[2025-10-12 20:27:19] 2025-10-13 00:26:38,899 | INFO     | 
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | job summary report
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | --------------------------------------------------
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | PanDA job id: 6840390092
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | task id: 46676269
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | errors: (none)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | pilot state: finished 
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | transexitcode: 0
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | exeerrorcode: 0
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | exeerrordiag: 
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | exitcode: 0
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | exitmsg: OK
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | cpuconsumptiontime: 35578 s
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | nevents: 400
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | neventsw: 0
[2025-10-12 20:27:19] 2025-10-13 00:26:38,900 | INFO     | pid: 856846
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | pgrp: 856846
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | corecount: 8
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | event service: False
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | sizes: {0: 2348856, 10: 2349118, 11: 2349146, 8702: 2377057, 8705: 2386055, 8707: 2386111, 8722: 2386433}
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | --------------------------------------------------
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | 
[2025-10-12 20:27:19] 2025-10-13 00:26:38,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:27:19] 2025-10-13 00:26:38,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | job 6840390092 has completed (purged errors)
[2025-10-12 20:27:19] 2025-10-13 00:26:38,944 | INFO     | overall cleanup function is called
[2025-10-12 20:27:19] 2025-10-13 00:26:39,954 | INFO     | --- collectZombieJob: --- 10, [856846]
[2025-10-12 20:27:19] 2025-10-13 00:26:39,955 | INFO     | zombie collector waiting for pid 856846
[2025-10-12 20:27:19] 2025-10-13 00:26:39,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:27:19] 2025-10-13 00:26:39,955 | INFO     | collected zombie processes
[2025-10-12 20:27:19] 2025-10-13 00:26:39,955 | INFO     | will attempt to kill all subprocesses of pid=856846
[2025-10-12 20:27:19] 2025-10-13 00:26:40,675 | INFO     | process IDs to be killed: [856846] (in reverse order)
[2025-10-12 20:27:19] 2025-10-13 00:26:40,862 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:27:19] 2025-10-13 00:26:40,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:27:19] 2025-10-13 00:26:40,914 | INFO     | did not find any defunct processes belonging to 856846
[2025-10-12 20:27:19] 2025-10-13 00:26:41,013 | INFO     | did not find any defunct processes belonging to 856846
[2025-10-12 20:27:19] 2025-10-13 00:26:41,014 | INFO     | ready for new job
[2025-10-12 20:27:19] 2025-10-13 00:26:41,014 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:27:19] 2025-10-13 00:26:41,023 | INFO     | ***************************************
[2025-10-12 20:27:19] 2025-10-13 00:26:41,024 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:27:19] 2025-10-13 00:26:41,024 | INFO     | ***************************************
[2025-10-12 20:27:19] 2025-10-13 00:26:41,024 | INFO     | 
[2025-10-12 20:27:19] 2025-10-13 00:26:41,032 | INFO     | architecture information:
[2025-10-12 20:27:19] 2025-10-13 00:26:41,033 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:27:19] 2025-10-13 00:26:41,155 | INFO     | cat /etc/os-release:
[2025-10-12 20:27:19] NAME="CentOS Linux"
[2025-10-12 20:27:19] VERSION="7 (Core)"
[2025-10-12 20:27:19] ID="centos"
[2025-10-12 20:27:19] ID_LIKE="rhel fedora"
[2025-10-12 20:27:19] VERSION_ID="7"
[2025-10-12 20:27:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:27:19] ANSI_COLOR="0;31"
[2025-10-12 20:27:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:27:19] HOME_URL="https://www.centos.org/"
[2025-10-12 20:27:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:27:19] 
[2025-10-12 20:27:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:27:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:27:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:27:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:27:19] 
[2025-10-12 20:27:19] 2025-10-13 00:26:41,155 | INFO     | ***************************************
[2025-10-12 20:27:19] 2025-10-13 00:26:41,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:27:19] 2025-10-13 00:26:41,713 | INFO     | sufficient remaining disk space (127737528320 B)
[2025-10-12 20:27:19] 2025-10-13 00:26:41,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:27:19] 2025-10-13 00:26:41,714 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:27:19] 2025-10-13 00:26:41,714 | INFO     | update_server=False
[2025-10-12 20:27:19] 2025-10-13 00:26:41,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:27:19] 2025-10-13 00:26:41,925 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:27:19] 2025-10-13 00:26:41,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:27:19] 2025-10-13 00:26:41,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:27:19] 2025-10-13 00:26:41,926 | INFO     | will abort loop
[2025-10-12 20:27:19] 2025-10-13 00:26:42,308 | INFO     | all payload control threads have been joined
[2025-10-12 20:27:19] 2025-10-13 00:26:42,376 | INFO     | all data control threads have been joined
[2025-10-12 20:27:19] 2025-10-13 00:26:42,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:27:19] 2025-10-13 00:26:42,720 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:42,932 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,006 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,314 | INFO     | [payload] control thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,327 | INFO     | all job control threads have been joined
[2025-10-12 20:27:19] 2025-10-13 00:26:43,383 | INFO     | [data] control thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,463 | INFO     | [job] validate thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,472 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,599 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:27:19] 2025-10-13 00:26:43,768 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:27:19] 2025-10-13 00:26:43,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:43,992 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:44,004 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:44,333 | INFO     | [job] control thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:44,422 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:44,923 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:26:47,707 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:27:19] 2025-10-13 00:27:11,451 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:27:19] 2025-10-13 00:27:13,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077350106944)>', '<ExcThread(monitor, started 140076868695808)>']
[2025-10-12 20:27:19] 2025-10-13 00:27:13,849 | INFO     | PID=848081 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | INFO     | .. there are 37 such processes running
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:27:19] 2025-10-13 00:27:13,850 | INFO     | [monitor] control thread has ended
[2025-10-12 20:27:19] 2025-10-13 00:27:18,358 | INFO     | all workflow threads have been joined
[2025-10-12 20:27:19] 2025-10-13 00:27:18,359 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:27:19] 2025-10-13 00:27:18,359 | INFO     | traces error code: 0
[2025-10-12 20:27:19] 2025-10-13 00:27:18,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:27:19] 2025-10-13 00:27:18,630 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:27:19] 2025-10-13 00:27:18,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:27:19] 2025-10-13 00:27:18,643 [wrapper] pilotpid: 848081
[2025-10-12 20:27:19] 2025-10-13 00:27:18,646 [wrapper] Pilot exit status: 0
[2025-10-12 20:27:19] 2025-10-13 00:27:18,662 [wrapper] pandaids: 6840390092
[2025-10-12 20:27:19] 2025-10-13 00:27:18,776 [wrapper] cleanup supervisor_pilot 1338591 848082
[2025-10-12 20:27:19] 2025-10-13 00:27:18,779 [wrapper] Test setup, not cleaning
[2025-10-12 20:27:19] 2025-10-13 00:27:18,781 [wrapper] apfmon messages muted
[2025-10-12 20:27:19] 2025-10-13 00:27:18,783 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:27:19] 2025-10-13 00:27:18,786 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:27:19]  *** Error codes and diagnostics ***
[2025-10-12 20:27:19]     "exeErrorCode": 0,
[2025-10-12 20:27:19]     "exeErrorDiag": "",
[2025-10-12 20:27:19]     "pilotErrorCode": 0,
[2025-10-12 20:27:19]     "pilotErrorDiag": "",
[2025-10-12 20:27:19]  *** Listing of results directory ***
[2025-10-12 20:27:19] total 408720
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 20:27:19] -rwx------. 1 boincer umatlas     36292 Oct 12 12:13 runpilot2-wrapper.sh
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:13 queuedata.json
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:27:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:00 run_atlas
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:00 job.xml
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas 223762258 Oct 12 18:00 EVNT.46676267._004731.pool.root.1
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:00 start_atlas.sh
[2025-10-12 20:27:19] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:00 shared
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 18:00 input.tar.gz
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:00 boinc_lockfile
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 18:00 pandaJob.out
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas    975528 Oct 12 18:00 agis_schedconf.cvmfs.json
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:27:19] drwx------. 5 boincer umatlas      4096 Oct 12 18:00 pilot3
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas      6944 Oct 12 20:22 init_data.xml
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas 187830592 Oct 12 20:25 HITS.46676269._083218.pool.root.1
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas       530 Oct 12 20:25 boinc_task_state.xml
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas      1043 Oct 12 20:26 memory_monitor_summary.json
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas    375094 Oct 12 20:26 log.46676269._083218.job.log.tgz.1
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas        95 Oct 12 20:26 pilot_heartbeat.json
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas      7783 Oct 12 20:26 heartbeat.json
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas      5010 Oct 12 20:27 pilotlog.txt
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:27 boinc_mmap_file
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas   1138145 Oct 12 20:27 log.46676269._083218.job.log.1
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas        27 Oct 12 20:27 wrapper_checkpoint.txt
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas       357 Oct 12 20:27 output.list
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:27 runtime_log
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas   1536000 Oct 12 20:27 result.tar.gz
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 20:27 runtime_log.err
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas       654 Oct 12 20:27 h52MDmPsDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnakNDmzvpFWo.diag
[2025-10-12 20:27:19] -rw-r--r--. 1 boincer umatlas     20991 Oct 12 20:27 stderr.txt
[2025-10-12 20:27:19] HITS file was successfully produced:
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas 187830592 Oct 12 20:25 shared/HITS.pool.root.1
[2025-10-12 20:27:19]  *** Contents of shared directory: ***
[2025-10-12 20:27:19] total 404036
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas 223762258 Oct 12 18:00 ATLAS.root_0
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:00 start_atlas.sh
[2025-10-12 20:27:19] -rw-r--r--. 2 boincer umatlas    569673 Oct 12 18:00 input.tar.gz
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas 187830592 Oct 12 20:25 HITS.pool.root.1
[2025-10-12 20:27:19] -rw-------. 1 boincer umatlas   1536000 Oct 12 20:27 result.tar.gz
20:27:20 (842061): run_atlas exited; CPU time 35896.235382
20:27:20 (842061): called boinc_finish(0)

</stderr_txt>
]]>

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