Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:39:27 (2872031): wrapper (7.7.26015): starting
18:39:27 (2872031): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 18:39:27] Arguments: --nthreads 8
[2025-10-12 18:39:27] Threads: 8
[2025-10-12 18:39:27] Checking for CVMFS
[2025-10-12 18:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:39:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:39:28] 2.13.2.0 5112 6291 123692 151640 1 174 39252026 40960001 19689 16776704 0 19703411 99.888 4212032 28613 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 18:39:28] CVMFS is ok
[2025-10-12 18:39:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:39:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:39:28] Further information can be found at the LHC@home message board.
[2025-10-12 18:39:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:39:28] Checking for apptainer binary...
[2025-10-12 18:39:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:39:28] Running /usr/bin/apptainer --version
[2025-10-12 18:39:28] apptainer version 1.4.3-1.el9
[2025-10-12 18:39:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:39:28] c-212-2.aglt2.org
[2025-10-12 18:39:28] apptainer works
[2025-10-12 18:39:28] Set ATHENA_PROC_NUMBER=8
[2025-10-12 18:39:28] Set ATHENA_CORE_NUMBER=8
[2025-10-12 18:39:28] Starting ATLAS job with PandaID=6840392479
[2025-10-12 18:39:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:45:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:45:12] 2025-10-13 00:44:05,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:45:12] 2025-10-13 00:44:05,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:45:12] 2025-10-13 00:44:05,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:45:12] 2025-10-13 00:44:05,665 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:45:12] 2025-10-13 00:44:05,665 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 20:45:12] 2025-10-13 00:44:05,665 | INFO     | sum of deviations: -25375780125.49999
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | mean x: 1760312522.5
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | mean y: 2584800.7459016396
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | -- intersect: 79340437987.72064
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | intersect: 79340437987.72064
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | chi2: 2.443958928396707
[2025-10-12 20:45:12] 2025-10-13 00:44:05,666 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | sum of deviations: -15716418992.999998
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | mean x: 1760312370.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | mean y: 2606388.5897435895
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | -- intersect: 55713363039.427124
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | intersect: 55713363039.427124
[2025-10-12 20:45:12] 2025-10-13 00:44:05,667 | INFO     | chi2: 1.740641967507769
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | current chi2=1.740641967507769 (change=28.777773338045826 %)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | sum of deviations: -13948683401.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | mean x: 1760312217.5
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | mean y: 2610811.6785714286
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | -- intersect: 56369627708.77295
[2025-10-12 20:45:12] 2025-10-13 00:44:05,668 | INFO     | intersect: 56369627708.77295
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | chi2: 1.7395834995284927
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | current chi2=1.7395834995284927 (change=0.060809057751935354 %)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | right removable region: 111
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | sum of deviations: -43202761268.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | mean x: 1760312675.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,669 | INFO     | mean y: 2624882.2393162395
[2025-10-12 20:45:12] 2025-10-13 00:44:05,670 | INFO     | -- intersect: 153145585612.7593
[2025-10-12 20:45:12] 2025-10-13 00:44:05,670 | INFO     | intersect: 153145585612.7593
[2025-10-12 20:45:12] 2025-10-13 00:44:05,670 | INFO     | chi2: 0.955545921545268
[2025-10-12 20:45:12] 2025-10-13 00:44:05,670 | INFO     | current chi2=0.955545921545268 (change=60.901719319312456 %)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,670 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | sum of deviations: -40022073282.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | mean x: 1760312827.5
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | mean y: 2616815.5
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | -- intersect: 161732982172.12494
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | intersect: 161732982172.12494
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | chi2: 0.9432694035325924
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | current chi2=0.9432694035325924 (change=1.2847648381798895 %)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | left removable region: 20
[2025-10-12 20:45:12] 2025-10-13 00:44:05,671 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | sum of deviations: -20026607623.000004
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | mean x: 1760312797.0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | mean y: 2621602.901098901
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | -- intersect: 150887974160.48578
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | intersect: 150887974160.48578
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | chi2: 0.17921868148114858
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | -- intersect: 150887974160.48578
[2025-10-12 20:45:12] 2025-10-13 00:44:05,672 | INFO     | current memory leak: -85.72 B/s (using 91 data points, chi2=0.18)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | could have reported an average CPU frequency of 2911 MHz (8 samples)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | ..............................
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . Timing measurements:
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . get job = 0 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . initial setup = 3 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . payload setup = 10 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . stage-in = 0 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . payload execution = 7406 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . stage-out = 0 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | . log creation = 0 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,673 | INFO     | ..............................
[2025-10-12 20:45:12] 2025-10-13 00:44:05,793 | INFO     | 
[2025-10-12 20:45:12] 2025-10-13 00:44:05,793 | INFO     | job summary report
[2025-10-12 20:45:12] 2025-10-13 00:44:05,794 | INFO     | --------------------------------------------------
[2025-10-12 20:45:12] 2025-10-13 00:44:05,794 | INFO     | PanDA job id: 6840392479
[2025-10-12 20:45:12] 2025-10-13 00:44:05,794 | INFO     | task id: 46676269
[2025-10-12 20:45:12] 2025-10-13 00:44:05,794 | INFO     | errors: (none)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | pilot state: finished 
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | transexitcode: 0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | exeerrorcode: 0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | exeerrordiag: 
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | exitcode: 0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | exitmsg: OK
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | cpuconsumptiontime: 38282 s
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | nevents: 400
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | neventsw: 0
[2025-10-12 20:45:12] 2025-10-13 00:44:05,795 | INFO     | pid: 2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | pgrp: 2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | corecount: 8
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | event service: False
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349147, 12: 2349175, 7421: 2376483, 7422: 2376482, 7424: 2385664, 7426: 2385720, 7432: 2385914}
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | --------------------------------------------------
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | 
[2025-10-12 20:45:12] 2025-10-13 00:44:05,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 20:45:12] 2025-10-13 00:44:05,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | job 6840392479 has completed (purged errors)
[2025-10-12 20:45:12] 2025-10-13 00:44:05,861 | INFO     | overall cleanup function is called
[2025-10-12 20:45:12] 2025-10-13 00:44:06,895 | INFO     | --- collectZombieJob: --- 10, [2884532]
[2025-10-12 20:45:12] 2025-10-13 00:44:06,895 | INFO     | zombie collector waiting for pid 2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:06,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:45:12] 2025-10-13 00:44:06,895 | INFO     | collected zombie processes
[2025-10-12 20:45:12] 2025-10-13 00:44:06,896 | INFO     | will attempt to kill all subprocesses of pid=2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:07,380 | INFO     | process IDs to be killed: [2884532] (in reverse order)
[2025-10-12 20:45:12] 2025-10-13 00:44:07,519 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:45:12] 2025-10-13 00:44:07,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:45:12] 2025-10-13 00:44:07,539 | INFO     | did not find any defunct processes belonging to 2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:07,557 | INFO     | did not find any defunct processes belonging to 2884532
[2025-10-12 20:45:12] 2025-10-13 00:44:07,558 | INFO     | ready for new job
[2025-10-12 20:45:12] 2025-10-13 00:44:07,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:45:12] 2025-10-13 00:44:07,561 | INFO     | ***************************************
[2025-10-12 20:45:12] 2025-10-13 00:44:07,561 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:45:12] 2025-10-13 00:44:07,561 | INFO     | ***************************************
[2025-10-12 20:45:12] 2025-10-13 00:44:07,561 | INFO     | 
[2025-10-12 20:45:12] 2025-10-13 00:44:07,612 | INFO     | architecture information:
[2025-10-12 20:45:12] 2025-10-13 00:44:07,620 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:45:12] 2025-10-13 00:44:07,681 | INFO     | cat /etc/os-release:
[2025-10-12 20:45:12] NAME="CentOS Linux"
[2025-10-12 20:45:12] VERSION="7 (Core)"
[2025-10-12 20:45:12] ID="centos"
[2025-10-12 20:45:12] ID_LIKE="rhel fedora"
[2025-10-12 20:45:12] VERSION_ID="7"
[2025-10-12 20:45:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:45:12] ANSI_COLOR="0;31"
[2025-10-12 20:45:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:45:12] HOME_URL="https://www.centos.org/"
[2025-10-12 20:45:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:45:12] 
[2025-10-12 20:45:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:45:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:45:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:45:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:45:12] 
[2025-10-12 20:45:12] 2025-10-13 00:44:07,681 | INFO     | ***************************************
[2025-10-12 20:45:12] 2025-10-13 00:44:08,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 20:45:12] 2025-10-13 00:44:08,210 | INFO     | sufficient remaining disk space (126913347584 B)
[2025-10-12 20:45:12] 2025-10-13 00:44:08,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:45:12] 2025-10-13 00:44:08,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:45:12] 2025-10-13 00:44:08,211 | INFO     | update_server=False
[2025-10-12 20:45:12] 2025-10-13 00:44:08,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:45:12] 2025-10-13 00:44:08,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:45:12] 2025-10-13 00:44:08,365 | INFO     | all payload control threads have been joined
[2025-10-12 20:45:12] 2025-10-13 00:44:08,680 | INFO     | all data control threads have been joined
[2025-10-12 20:45:12] 2025-10-13 00:44:08,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:45:12] 2025-10-13 00:44:08,819 | INFO     | aborting loop
[2025-10-12 20:45:12] 2025-10-13 00:44:09,216 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,271 | INFO     | all job control threads have been joined
[2025-10-12 20:45:12] 2025-10-13 00:44:09,325 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,371 | INFO     | [payload] control thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,521 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,669 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,688 | INFO     | [data] control thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,776 | INFO     | [job] validate thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,825 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:09,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:10,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:45:12] 2025-10-13 00:44:10,238 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:10,276 | INFO     | [job] control thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:10,507 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:10,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:45:12] 2025-10-13 00:44:10,811 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:11,817 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:14,215 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:45:12] 2025-10-13 00:44:39,036 | INFO     | PID=2875736 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:45:12] 2025-10-13 00:44:39,036 | INFO     | .. there are 16 such processes running
[2025-10-12 20:45:12] 2025-10-13 00:44:39,036 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:45:12] 2025-10-13 00:44:39,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:45:12] 2025-10-13 00:44:39,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:45:12] 2025-10-13 00:45:05,865 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:45:12] 2025-10-13 00:45:06,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395675096896)>', '<ExcThread(monitor, started 140395333793536)>']
[2025-10-12 20:45:12] 2025-10-13 00:45:07,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:45:12] 2025-10-13 00:45:07,194 | INFO     | [monitor] control thread has ended
[2025-10-12 20:45:12] 2025-10-13 00:45:11,937 | INFO     | all workflow threads have been joined
[2025-10-12 20:45:12] 2025-10-13 00:45:11,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:45:12] 2025-10-13 00:45:11,937 | INFO     | traces error code: 0
[2025-10-12 20:45:12] 2025-10-13 00:45:11,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:45:12] 2025-10-13 00:45:12,185 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:45:12] 2025-10-13 00:45:12,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:45:12] 2025-10-13 00:45:12,192 [wrapper] pilotpid: 2875736
[2025-10-12 20:45:12] 2025-10-13 00:45:12,196 [wrapper] Pilot exit status: 0
[2025-10-12 20:45:12] 2025-10-13 00:45:12,208 [wrapper] pandaids: 6840392479
[2025-10-12 20:45:12] 2025-10-13 00:45:12,310 [wrapper] cleanup supervisor_pilot 3105359 2875737
[2025-10-12 20:45:12] 2025-10-13 00:45:12,315 [wrapper] Test setup, not cleaning
[2025-10-12 20:45:12] 2025-10-13 00:45:12,317 [wrapper] apfmon messages muted
[2025-10-12 20:45:12] 2025-10-13 00:45:12,320 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:45:12] 2025-10-13 00:45:12,323 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:45:12]  *** Error codes and diagnostics ***
[2025-10-12 20:45:12]     "exeErrorCode": 0,
[2025-10-12 20:45:12]     "exeErrorDiag": "",
[2025-10-12 20:45:12]     "pilotErrorCode": 0,
[2025-10-12 20:45:12]     "pilotErrorDiag": "",
[2025-10-12 20:45:12]  *** Listing of results directory ***
[2025-10-12 20:45:12] total 417692
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:47 queuedata.json
[2025-10-12 20:45:12] -rwx------. 1 boincer umatlas     36292 Oct 12 12:47 runpilot2-wrapper.sh
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:45:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 18:39 run_atlas
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 18:39 job.xml
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas 221454250 Oct 12 18:39 EVNT.46676267._004785.pool.root.1
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:39 start_atlas.sh
[2025-10-12 20:45:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 18:39 shared
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 18:39 input.tar.gz
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 18:39 boinc_lockfile
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 18:39 pandaJob.out
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas    975603 Oct 12 18:39 agis_schedconf.cvmfs.json
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:45:12] drwx------. 5 boincer umatlas      4096 Oct 12 18:39 pilot3
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 20:38 init_data.xml
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas 199547853 Oct 12 20:43 HITS.46676269._083940.pool.root.1
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas       530 Oct 12 20:43 boinc_task_state.xml
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas      1042 Oct 12 20:43 memory_monitor_summary.json
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas    359775 Oct 12 20:43 log.46676269._083940.job.log.tgz.1
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas        95 Oct 12 20:44 pilot_heartbeat.json
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas      7786 Oct 12 20:44 heartbeat.json
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:45 boinc_mmap_file
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas        27 Oct 12 20:45 wrapper_checkpoint.txt
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas      4825 Oct 12 20:45 pilotlog.txt
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas   1048455 Oct 12 20:45 log.46676269._083940.job.log.1
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas       357 Oct 12 20:45 output.list
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:45 runtime_log
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas   1423360 Oct 12 20:45 result.tar.gz
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas       654 Oct 12 20:45 txIODmLPES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsikNDmda2hWo.diag
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 20:45 runtime_log.err
[2025-10-12 20:45:12] -rw-r--r--. 1 boincer umatlas     20899 Oct 12 20:45 stderr.txt
[2025-10-12 20:45:12] HITS file was successfully produced:
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas 199547853 Oct 12 20:43 shared/HITS.pool.root.1
[2025-10-12 20:45:12]  *** Contents of shared directory: ***
[2025-10-12 20:45:12] total 413112
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas 221454250 Oct 12 18:39 ATLAS.root_0
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 18:39 start_atlas.sh
[2025-10-12 20:45:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 18:39 input.tar.gz
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas 199547853 Oct 12 20:43 HITS.pool.root.1
[2025-10-12 20:45:12] -rw-------. 1 boincer umatlas   1423360 Oct 12 20:45 result.tar.gz
20:45:13 (2872031): run_atlas exited; CPU time 38520.827652
20:45:13 (2872031): called boinc_finish(0)

</stderr_txt>
]]>

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