Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:54 (2420162): wrapper (7.7.26015): starting
16:35:54 (2420162): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:35:54] Arguments: --nthreads 8
[2025-10-12 16:35:54] Threads: 8
[2025-10-12 16:35:54] Checking for CVMFS
[2025-10-12 16:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:35:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:35:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:35:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:35:55] 2.13.2.0 3657063 129731 463732 151636 2 320 32570329 32935936 22861 16776704 0 188392590 99.586 216096828 30632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:35:55] CVMFS is ok
[2025-10-12 16:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:35:55] Further information can be found at the LHC@home message board.
[2025-10-12 16:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:35:55] Checking for apptainer binary...
[2025-10-12 16:35:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:35:55] Running /usr/bin/apptainer --version
[2025-10-12 16:35:55] apptainer version 1.4.3-1.el9
[2025-10-12 16:35:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:35:55] c6-6-39-4.aglt2.org
[2025-10-12 16:35:55] apptainer works
[2025-10-12 16:35:55] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:35:55] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:35:55] Starting ATLAS job with PandaID=6840391002
[2025-10-12 16:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:15:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:15:31] 2025-10-13 00:22:43,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:15:31] 2025-10-13 00:22:43,217 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:15:31] 2025-10-13 00:22:43,218 | INFO     | sum of square deviations: 3392398585.945931
[2025-10-12 21:15:31] 2025-10-13 00:22:43,219 | INFO     | sum of deviations: -37959752796.78378
[2025-10-12 21:15:31] 2025-10-13 00:22:43,219 | INFO     | mean x: 1760308154.8648648
[2025-10-12 21:15:31] 2025-10-13 00:22:43,219 | INFO     | mean y: 2288181.207207207
[2025-10-12 21:15:31] 2025-10-13 00:22:43,219 | INFO     | -- intersect: 19699520305.303448
[2025-10-12 21:15:31] 2025-10-13 00:22:43,219 | INFO     | intersect: 19699520305.303448
[2025-10-12 21:15:31] 2025-10-13 00:22:43,220 | INFO     | chi2: 2.5237406864061525
[2025-10-12 21:15:31] 2025-10-13 00:22:43,220 | INFO     | sum of square deviations: 3168303464.5069265
[2025-10-12 21:15:31] 2025-10-13 00:22:43,221 | INFO     | sum of deviations: -23148851189.723503
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | mean x: 1760308002.3686635
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | mean y: 2298103.7465437786
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | -- intersect: 12863789577.465998
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | intersect: 12863789577.465998
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | chi2: 1.8520432208783386
[2025-10-12 21:15:31] 2025-10-13 00:22:43,222 | INFO     | current chi2=1.8520432208783386 (change=26.615153812982346 %)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,223 | INFO     | sum of square deviations: 2954314548.811308
[2025-10-12 21:15:31] 2025-10-13 00:22:43,224 | INFO     | sum of deviations: -22374913016.462265
[2025-10-12 21:15:31] 2025-10-13 00:22:43,224 | INFO     | mean x: 1760307849.8773584
[2025-10-12 21:15:31] 2025-10-13 00:22:43,224 | INFO     | mean y: 2298657.6745283017
[2025-10-12 21:15:31] 2025-10-13 00:22:43,224 | INFO     | -- intersect: 13334235515.59955
[2025-10-12 21:15:31] 2025-10-13 00:22:43,224 | INFO     | intersect: 13334235515.59955
[2025-10-12 21:15:31] 2025-10-13 00:22:43,225 | INFO     | chi2: 1.849445361035259
[2025-10-12 21:15:31] 2025-10-13 00:22:43,225 | INFO     | current chi2=1.849445361035259 (change=0.14026993613289118 %)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,225 | INFO     | right removable region: 211
[2025-10-12 21:15:31] 2025-10-13 00:22:43,225 | INFO     | sum of square deviations: 3168267352.76499
[2025-10-12 21:15:31] 2025-10-13 00:22:43,226 | INFO     | sum of deviations: -66729397785.22583
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | mean x: 1760308307.373272
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | mean y: 2307532.064516129
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | -- intersect: 37077560403.270584
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | intersect: 37077560403.270584
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | chi2: 1.1031402017164196
[2025-10-12 21:15:31] 2025-10-13 00:22:43,227 | INFO     | current chi2=1.1031402017164196 (change=56.2894790396509 %)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,228 | INFO     | sum of square deviations: 2954295147.7547216
[2025-10-12 21:15:31] 2025-10-13 00:22:43,229 | INFO     | sum of deviations: -65115874905.641495
[2025-10-12 21:15:31] 2025-10-13 00:22:43,229 | INFO     | mean x: 1760308459.8584905
[2025-10-12 21:15:31] 2025-10-13 00:22:43,229 | INFO     | mean y: 2306362.745283019
[2025-10-12 21:15:31] 2025-10-13 00:22:43,229 | INFO     | -- intersect: 38801417397.60675
[2025-10-12 21:15:31] 2025-10-13 00:22:43,229 | INFO     | intersect: 38801417397.60675
[2025-10-12 21:15:31] 2025-10-13 00:22:43,230 | INFO     | chi2: 1.0924250926593362
[2025-10-12 21:15:31] 2025-10-13 00:22:43,230 | INFO     | current chi2=1.0924250926593362 (change=0.9713279454788549 %)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,230 | INFO     | left removable region: 20
[2025-10-12 21:15:31] 2025-10-13 00:22:43,230 | INFO     | sum of square deviations: 2160510617.1937294
[2025-10-12 21:15:31] 2025-10-13 00:22:43,231 | INFO     | sum of deviations: -31943989353.88481
[2025-10-12 21:15:31] 2025-10-13 00:22:43,231 | INFO     | mean x: 1760308429.3455498
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | mean y: 2303954.664921466
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | -- intersect: 26029148386.286507
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | intersect: 26029148386.286507
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | chi2: 0.3408460007472779
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | -- intersect: 26029148386.286507
[2025-10-12 21:15:31] 2025-10-13 00:22:43,232 | INFO     | current memory leak: -14.79 B/s (using 191 data points, chi2=0.34)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | could have reported an average CPU frequency of 2869 MHz (11 samples)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | ..............................
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . Timing measurements:
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . get job = 0 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . initial setup = 2 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . payload setup = 11 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . stage-in = 0 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . payload execution = 13525 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,233 | INFO     | . stage-out = 3 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,234 | INFO     | . log creation = 0 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,234 | INFO     | ..............................
[2025-10-12 21:15:31] 2025-10-13 00:22:43,638 | INFO     | 
[2025-10-12 21:15:31] 2025-10-13 00:22:43,638 | INFO     | job summary report
[2025-10-12 21:15:31] 2025-10-13 00:22:43,638 | INFO     | --------------------------------------------------
[2025-10-12 21:15:31] 2025-10-13 00:22:43,638 | INFO     | PanDA job id: 6840391002
[2025-10-12 21:15:31] 2025-10-13 00:22:43,638 | INFO     | task id: 46676269
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | errors: (none)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | pilot state: finished 
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | transexitcode: 0
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | exeerrorcode: 0
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | exeerrordiag: 
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | exitcode: 0
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | exitmsg: OK
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | cpuconsumptiontime: 41381 s
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | nevents: 400
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | neventsw: 0
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | pid: 2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | pgrp: 2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | corecount: 8
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | event service: False
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | sizes: {0: 2348857, 8: 2349119, 11: 2349147, 13540: 2379267, 13541: 2379266, 13546: 2388348, 13549: 2388532, 13569: 2388726}
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | --------------------------------------------------
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | 
[2025-10-12 21:15:31] 2025-10-13 00:22:43,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 21:15:31] 2025-10-13 00:22:43,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | job 6840391002 has completed (purged errors)
[2025-10-12 21:15:31] 2025-10-13 00:22:43,680 | INFO     | overall cleanup function is called
[2025-10-12 21:15:31] 2025-10-13 00:22:44,700 | INFO     | --- collectZombieJob: --- 10, [2432214]
[2025-10-12 21:15:31] 2025-10-13 00:22:44,700 | INFO     | zombie collector waiting for pid 2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:44,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:15:31] 2025-10-13 00:22:44,700 | INFO     | collected zombie processes
[2025-10-12 21:15:31] 2025-10-13 00:22:44,701 | INFO     | will attempt to kill all subprocesses of pid=2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:45,221 | INFO     | process IDs to be killed: [2432214] (in reverse order)
[2025-10-12 21:15:31] 2025-10-13 00:22:45,428 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:15:31] 2025-10-13 00:22:45,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:15:31] 2025-10-13 00:22:45,448 | INFO     | did not find any defunct processes belonging to 2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:45,462 | INFO     | did not find any defunct processes belonging to 2432214
[2025-10-12 21:15:31] 2025-10-13 00:22:45,463 | INFO     | ready for new job
[2025-10-12 21:15:31] 2025-10-13 00:22:45,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:15:31] 2025-10-13 00:22:45,465 | INFO     | ***************************************
[2025-10-12 21:15:31] 2025-10-13 00:22:45,465 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:15:31] 2025-10-13 00:22:45,465 | INFO     | ***************************************
[2025-10-12 21:15:31] 2025-10-13 00:22:45,465 | INFO     | 
[2025-10-12 21:15:31] 2025-10-13 00:22:45,481 | INFO     | architecture information:
[2025-10-12 21:15:31] 2025-10-13 00:22:45,481 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:15:31] 2025-10-13 00:22:45,506 | INFO     | cat /etc/os-release:
[2025-10-12 21:15:31] NAME="CentOS Linux"
[2025-10-12 21:15:31] VERSION="7 (Core)"
[2025-10-12 21:15:31] ID="centos"
[2025-10-12 21:15:31] ID_LIKE="rhel fedora"
[2025-10-12 21:15:31] VERSION_ID="7"
[2025-10-12 21:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:15:31] ANSI_COLOR="0;31"
[2025-10-12 21:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:15:31] HOME_URL="https://www.centos.org/"
[2025-10-12 21:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:15:31] 
[2025-10-12 21:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:15:31] 
[2025-10-12 21:15:31] 2025-10-13 00:22:45,507 | INFO     | ***************************************
[2025-10-12 21:15:31] 2025-10-13 00:22:46,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 21:15:31] 2025-10-13 00:22:46,080 | INFO     | sufficient remaining disk space (75187093504 B)
[2025-10-12 21:15:31] 2025-10-13 00:22:46,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:15:31] 2025-10-13 00:22:46,081 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:15:31] 2025-10-13 00:22:46,081 | INFO     | update_server=False
[2025-10-12 21:15:31] 2025-10-13 00:22:46,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:15:31] 2025-10-13 00:22:46,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:15:31] 2025-10-13 00:22:46,507 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:15:31] 2025-10-13 00:22:46,507 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:15:31] 2025-10-13 00:22:46,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:15:31] 2025-10-13 00:22:46,508 | INFO     | will abort loop
[2025-10-12 21:15:31] 2025-10-13 00:22:46,763 | INFO     | all data control threads have been joined
[2025-10-12 21:15:31] 2025-10-13 00:22:46,965 | INFO     | all job control threads have been joined
[2025-10-12 21:15:31] 2025-10-13 00:22:47,087 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:15:31] 2025-10-13 00:22:47,272 | INFO     | all payload control threads have been joined
[2025-10-12 21:15:31] 2025-10-13 00:22:47,513 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,536 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,635 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,765 | INFO     | [job] validate thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,770 | INFO     | [data] control thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,813 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:47,971 | INFO     | [job] control thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,020 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,088 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,286 | INFO     | [payload] control thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:15:31] 2025-10-13 00:22:48,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,569 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:48,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:49,357 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:22:51,275 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:15:31] 2025-10-13 00:23:16,232 | INFO     | PID=2424564 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:15:31] 2025-10-13 00:23:16,233 | INFO     | .. there are 31 such processes running
[2025-10-12 21:15:31] 2025-10-13 00:23:16,255 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:15:31] 2025-10-13 00:23:16,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:15:31] 2025-10-13 00:23:16,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:15:31] 2025-10-13 00:23:38,853 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:15:31] 2025-10-13 00:23:40,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313605797696)>', '<ExcThread(monitor, started 140312815068928)>']
[2025-10-12 21:15:31] 2025-10-13 00:23:40,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:15:31] 2025-10-13 00:23:40,442 | INFO     | [monitor] control thread has ended
[2025-10-12 21:15:31] 2025-10-13 00:23:45,243 | INFO     | all workflow threads have been joined
[2025-10-12 21:15:31] 2025-10-13 00:23:45,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:15:31] 2025-10-13 00:23:45,245 | INFO     | traces error code: 0
[2025-10-12 21:15:31] 2025-10-13 00:23:45,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:15:31] 2025-10-13 00:23:46,129 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:15:31] 2025-10-13 00:23:46,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:15:31] 2025-10-13 00:23:46,137 [wrapper] pilotpid: 2424564
[2025-10-12 21:15:31] 2025-10-13 00:23:46,179 [wrapper] Pilot exit status: 0
[2025-10-12 21:15:31] 2025-10-13 00:23:46,323 [wrapper] pandaids: 6840391002
[2025-10-12 21:15:31] 2025-10-13 00:23:47,061 [wrapper] cleanup supervisor_pilot 3212749 2424565
[2025-10-12 21:15:31] 2025-10-13 00:23:47,090 [wrapper] Test setup, not cleaning
[2025-10-12 21:15:31] 2025-10-13 00:23:47,134 [wrapper] apfmon messages muted
[2025-10-12 21:15:31] 2025-10-13 00:23:47,160 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:15:31] 2025-10-13 00:23:47,224 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:15:31]  *** Error codes and diagnostics ***
[2025-10-12 21:15:31]     "exeErrorCode": 0,
[2025-10-12 21:15:31]     "exeErrorDiag": "",
[2025-10-12 21:15:31]     "pilotErrorCode": 0,
[2025-10-12 21:15:31]     "pilotErrorDiag": "",
[2025-10-12 21:15:31]  *** Listing of results directory ***
[2025-10-12 21:15:31] total 411828
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:40 queuedata.json
[2025-10-12 21:15:31] -rwx------. 1 boincer umatlas     36292 Oct 12 12:42 runpilot2-wrapper.sh
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:42 pilot3.tar.gz
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:15:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:35 run_atlas
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:35 job.xml
[2025-10-12 21:15:31] -rw-r--r--. 2 boincer umatlas 222033690 Oct 12 16:35 EVNT.46676267._004753.pool.root.1
[2025-10-12 21:15:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:35 start_atlas.sh
[2025-10-12 21:15:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:35 shared
[2025-10-12 21:15:31] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:35 input.tar.gz
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:35 boinc_lockfile
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:35 pandaJob.out
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas    975536 Oct 12 16:36 agis_schedconf.cvmfs.json
[2025-10-12 21:15:31] drwx------. 5 boincer umatlas      4096 Oct 12 16:36 pilot3
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas 191490064 Oct 12 20:21 HITS.46676269._083774.pool.root.1
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas       529 Oct 12 20:21 boinc_task_state.xml
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas      1043 Oct 12 20:22 memory_monitor_summary.json
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas    445016 Oct 12 20:22 log.46676269._083774.job.log.tgz.1
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas      7829 Oct 12 20:22 heartbeat.json
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas        95 Oct 12 20:23 pilot_heartbeat.json
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas      5010 Oct 12 20:23 pilotlog.txt
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas   1698099 Oct 12 20:23 log.46676269._083774.job.log.1
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas       357 Oct 12 20:23 output.list
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:23 runtime_log
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas   2160640 Oct 12 20:23 result.tar.gz
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 20:23 runtime_log.err
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas       657 Oct 12 20:23 oLJNDmHKES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhhkNDmdIzbFo.diag
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 21:11 init_data.xml
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:15 wrapper_checkpoint.txt
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:15 boinc_mmap_file
[2025-10-12 21:15:31] -rw-r--r--. 1 boincer umatlas     21026 Oct 12 21:15 stderr.txt
[2025-10-12 21:15:31] HITS file was successfully produced:
[2025-10-12 21:15:31] -rw-------. 1 boincer umatlas 191490064 Oct 12 20:21 shared/HITS.pool.root.1
[2025-10-12 21:15:31]  *** Contents of shared directory: ***
[2025-10-12 21:15:32] total 406528
[2025-10-12 21:15:32] -rw-r--r--. 2 boincer umatlas 222033690 Oct 12 16:35 ATLAS.root_0
[2025-10-12 21:15:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:35 start_atlas.sh
[2025-10-12 21:15:32] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 16:35 input.tar.gz
[2025-10-12 21:15:32] -rw-------. 1 boincer umatlas 191490064 Oct 12 20:21 HITS.pool.root.1
[2025-10-12 21:15:32] -rw-------. 1 boincer umatlas   2160640 Oct 12 20:23 result.tar.gz
21:15:33 (2420162): run_atlas exited; CPU time 41787.944969
21:15:33 (2420162): called boinc_finish(0)

</stderr_txt>
]]>

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