Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:18:59 (1827440): wrapper (7.7.26015): starting
16:18:59 (1827440): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:18:59] Arguments: --nthreads 8
[2025-10-12 16:18:59] Threads: 8
[2025-10-12 16:18:59] Checking for CVMFS
[2025-10-12 16:19:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:19:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:19:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:19:01] 2.13.2.0 4001654 129715 473156 151636 1 20 29644093 32935936 18168 16776704 25 243040710 99.585 259493979 22386 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 16:19:01] CVMFS is ok
[2025-10-12 16:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:19:01] Further information can be found at the LHC@home message board.
[2025-10-12 16:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:19:01] Checking for apptainer binary...
[2025-10-12 16:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:19:01] Running /usr/bin/apptainer --version
[2025-10-12 16:19:01] apptainer version 1.4.3-1.el9
[2025-10-12 16:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:19:02] c7-11-13.aglt2.org
[2025-10-12 16:19:02] apptainer works
[2025-10-12 16:19:02] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:19:02] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:19:02] Starting ATLAS job with PandaID=6840182604
[2025-10-12 16:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:41:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:41:58] 2025-10-13 01:40:47,338 | INFO     | time since job start (19193s) is within the limit (172800.0s)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,679 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 21:41:58] 2025-10-13 01:40:47,705 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3271.6316562500015
[2025-10-12 21:41:58] 2025-10-13 01:40:47,792 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840182604/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,793 | INFO     | extracted standard info from prmon json
[2025-10-12 21:41:58] 2025-10-13 01:40:47,793 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:41:58] 2025-10-13 01:40:47,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:41:58] 2025-10-13 01:40:47,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:41:58] 2025-10-13 01:40:47,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:41:58] 2025-10-13 01:40:47,811 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:41:58] 2025-10-13 01:40:47,812 | INFO     | sum of square deviations: 9327717761.710646
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | sum of deviations: 59553510253.49191
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | mean x: 1760310146.511254
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | mean y: 2091161.4308681672
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | -- intersect: -11236740355.31071
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | intersect: -11236740355.31071
[2025-10-12 21:41:58] 2025-10-13 01:40:47,814 | INFO     | chi2: 7.165796834328241
[2025-10-12 21:41:58] 2025-10-13 01:40:47,822 | INFO     | sum of square deviations: 8885183032.604574
[2025-10-12 21:41:58] 2025-10-13 01:40:47,824 | INFO     | sum of deviations: 93765446530.18633
[2025-10-12 21:41:58] 2025-10-13 01:40:47,824 | INFO     | mean x: 1760309994.0359478
[2025-10-12 21:41:58] 2025-10-13 01:40:47,824 | INFO     | mean y: 2102827.8921568627
[2025-10-12 21:41:58] 2025-10-13 01:40:47,824 | INFO     | -- intersect: -18574470329.537354
[2025-10-12 21:41:58] 2025-10-13 01:40:47,825 | INFO     | intersect: -18574470329.537354
[2025-10-12 21:41:58] 2025-10-13 01:40:47,825 | INFO     | chi2: 5.580859677612571
[2025-10-12 21:41:58] 2025-10-13 01:40:47,825 | INFO     | current chi2=5.580859677612571 (change=22.118086702136466 %)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,825 | INFO     | right removable region: 305
[2025-10-12 21:41:58] 2025-10-13 01:40:47,825 | INFO     | sum of square deviations: 8884896332.604574
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | sum of deviations: -22536670904.25818
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | mean x: 1760310299.0359478
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | mean y: 2119395.114379085
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | -- intersect: 4467172493.502067
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | intersect: 4467172493.502067
[2025-10-12 21:41:58] 2025-10-13 01:40:47,839 | INFO     | chi2: 3.3967845319422665
[2025-10-12 21:41:58] 2025-10-13 01:40:47,840 | INFO     | current chi2=3.3967845319422665 (change=52.59725316702063 %)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,840 | INFO     | sum of square deviations: 8456326152.232545
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | sum of deviations: -59165151299.09296
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | mean x: 1760310451.5581396
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | mean y: 2132396.405315615
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | -- intersect: 12318241345.48076
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | intersect: 12318241345.48076
[2025-10-12 21:41:58] 2025-10-13 01:40:47,842 | INFO     | chi2: 2.5899961771322215
[2025-10-12 21:41:58] 2025-10-13 01:40:47,847 | INFO     | current chi2=2.5899961771322215 (change=23.751531697794412 %)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,847 | INFO     | left removable region: 20
[2025-10-12 21:41:58] 2025-10-13 01:40:47,847 | INFO     | sum of square deviations: 7178248393.07369
[2025-10-12 21:41:58] 2025-10-13 01:40:47,849 | INFO     | sum of deviations: -44367304031.9263
[2025-10-12 21:41:58] 2025-10-13 01:40:47,849 | INFO     | mean x: 1760310573.6210527
[2025-10-12 21:41:58] 2025-10-13 01:40:47,849 | INFO     | mean y: 2152494.954385965
[2025-10-12 21:41:58] 2025-10-13 01:40:47,849 | INFO     | -- intersect: 10882276744.460566
[2025-10-12 21:41:58] 2025-10-13 01:40:47,849 | INFO     | intersect: 10882276744.460566
[2025-10-12 21:41:58] 2025-10-13 01:40:47,850 | INFO     | chi2: 0.6510057522926169
[2025-10-12 21:41:58] 2025-10-13 01:40:47,850 | INFO     | -- intersect: 10882276744.460566
[2025-10-12 21:41:58] 2025-10-13 01:40:47,850 | INFO     | current memory leak: -6.18 B/s (using 285 data points, chi2=0.65)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,850 | INFO     | could have reported an average CPU frequency of 3257 MHz (14 samples)
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | ..............................
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . Timing measurements:
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . get job = 0 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . initial setup = 9 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . payload setup = 84 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . stage-in = 0 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . payload execution = 18970 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . stage-out = 3 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | . log creation = 0 s
[2025-10-12 21:41:58] 2025-10-13 01:40:47,859 | INFO     | ..............................
[2025-10-12 21:41:58] 2025-10-13 01:40:48,106 | INFO     | 
[2025-10-12 21:41:58] 2025-10-13 01:40:48,106 | INFO     | job summary report
[2025-10-12 21:41:58] 2025-10-13 01:40:48,106 | INFO     | --------------------------------------------------
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | PanDA job id: 6840182604
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | task id: 46676269
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | errors: (none)
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | pilot state: finished 
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | transexitcode: 0
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | exeerrorcode: 0
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | exeerrordiag: 
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | exitcode: 0
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | exitmsg: OK
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | cpuconsumptiontime: 33593 s
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | nevents: 400
[2025-10-12 21:41:58] 2025-10-13 01:40:48,107 | INFO     | neventsw: 0
[2025-10-12 21:41:58] 2025-10-13 01:40:48,108 | INFO     | pid: 1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:48,108 | INFO     | pgrp: 1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:48,108 | INFO     | corecount: 8
[2025-10-12 21:41:58] 2025-10-13 01:40:48,108 | INFO     | event service: False
[2025-10-12 21:41:58] 2025-10-13 01:40:48,108 | INFO     | sizes: {0: 2348685, 1: 2348884, 12: 2348884, 23: 2348912, 34: 2348940, 45: 2348968, 55: 2349414, 19058: 2381769, 19062: 2390823, 19092: 2390961}
[2025-10-12 21:41:58] 2025-10-13 01:40:48,127 | INFO     | --------------------------------------------------
[2025-10-12 21:41:58] 2025-10-13 01:40:48,127 | INFO     | 
[2025-10-12 21:41:58] 2025-10-13 01:40:48,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 21:41:58] 2025-10-13 01:40:48,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:41:58] 2025-10-13 01:40:48,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:41:58] 2025-10-13 01:40:48,488 | INFO     | job 6840182604 has completed (purged errors)
[2025-10-12 21:41:58] 2025-10-13 01:40:48,488 | INFO     | overall cleanup function is called
[2025-10-12 21:41:58] 2025-10-13 01:40:49,506 | INFO     | --- collectZombieJob: --- 10, [1842732]
[2025-10-12 21:41:58] 2025-10-13 01:40:49,506 | INFO     | zombie collector waiting for pid 1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:49,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:41:58] 2025-10-13 01:40:49,506 | INFO     | collected zombie processes
[2025-10-12 21:41:58] 2025-10-13 01:40:49,506 | INFO     | will attempt to kill all subprocesses of pid=1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:51,380 | INFO     | process IDs to be killed: [1842732] (in reverse order)
[2025-10-12 21:41:58] 2025-10-13 01:40:52,221 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:41:58] 2025-10-13 01:40:52,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:41:58] 2025-10-13 01:40:52,283 | INFO     | did not find any defunct processes belonging to 1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:52,314 | INFO     | did not find any defunct processes belonging to 1842732
[2025-10-12 21:41:58] 2025-10-13 01:40:52,314 | INFO     | ready for new job
[2025-10-12 21:41:58] 2025-10-13 01:40:52,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:41:58] 2025-10-13 01:40:52,317 | INFO     | ***************************************
[2025-10-12 21:41:58] 2025-10-13 01:40:52,317 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:41:58] 2025-10-13 01:40:52,317 | INFO     | ***************************************
[2025-10-12 21:41:58] 2025-10-13 01:40:52,317 | INFO     | 
[2025-10-12 21:41:58] 2025-10-13 01:40:52,343 | INFO     | architecture information:
[2025-10-12 21:41:58] 2025-10-13 01:40:52,373 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:41:58] 2025-10-13 01:40:52,576 | INFO     | cat /etc/os-release:
[2025-10-12 21:41:58] NAME="CentOS Linux"
[2025-10-12 21:41:58] VERSION="7 (Core)"
[2025-10-12 21:41:58] ID="centos"
[2025-10-12 21:41:58] ID_LIKE="rhel fedora"
[2025-10-12 21:41:58] VERSION_ID="7"
[2025-10-12 21:41:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:41:58] ANSI_COLOR="0;31"
[2025-10-12 21:41:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:41:58] HOME_URL="https://www.centos.org/"
[2025-10-12 21:41:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:41:58] 
[2025-10-12 21:41:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:41:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:41:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:41:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:41:58] 
[2025-10-12 21:41:58] 2025-10-13 01:40:52,576 | INFO     | ***************************************
[2025-10-12 21:41:58] 2025-10-13 01:40:53,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 21:41:58] 2025-10-13 01:40:53,382 | INFO     | sufficient remaining disk space (95729745920 B)
[2025-10-12 21:41:58] 2025-10-13 01:40:53,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:41:58] 2025-10-13 01:40:53,383 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:41:58] 2025-10-13 01:40:53,383 | INFO     | update_server=False
[2025-10-12 21:41:58] 2025-10-13 01:40:53,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:41:58] 2025-10-13 01:40:53,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:58] 2025-10-13 01:40:53,703 | INFO     | all job control threads have been joined
[2025-10-12 21:41:58] 2025-10-13 01:40:53,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:41:58] 2025-10-13 01:40:53,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:41:58] 2025-10-13 01:40:53,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:41:58] 2025-10-13 01:40:53,840 | INFO     | will abort loop
[2025-10-12 21:41:58] 2025-10-13 01:40:53,905 | INFO     | all data control threads have been joined
[2025-10-12 21:41:58] 2025-10-13 01:40:53,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:41:58] 2025-10-13 01:40:54,289 | INFO     | all payload control threads have been joined
[2025-10-12 21:41:58] 2025-10-13 01:40:54,389 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,395 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,709 | INFO     | [job] control thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,716 | INFO     | [job] validate thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,830 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,846 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:54,911 | INFO     | [data] control thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,074 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,296 | INFO     | [payload] control thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,345 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,815 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,880 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,888 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:55,936 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:40:56,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:41:58] 2025-10-13 01:41:00,182 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:41:58] 2025-10-13 01:41:22,063 | INFO     | PID=1832841 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:41:58] 2025-10-13 01:41:22,063 | INFO     | .. there are 21 such processes running
[2025-10-12 21:41:58] 2025-10-13 01:41:22,064 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:41:58] 2025-10-13 01:41:22,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:41:58] 2025-10-13 01:41:22,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:41:58] 2025-10-13 01:41:31,213 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:41:58] 2025-10-13 01:41:31,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055773935424)>', '<ExcThread(monitor, started 140054982813440)>']
[2025-10-12 21:41:58] 2025-10-13 01:41:32,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:41:58] 2025-10-13 01:41:32,163 | INFO     | [monitor] control thread has ended
[2025-10-12 21:41:58] 2025-10-13 01:41:36,592 | INFO     | all workflow threads have been joined
[2025-10-12 21:41:58] 2025-10-13 01:41:36,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:41:58] 2025-10-13 01:41:36,592 | INFO     | traces error code: 0
[2025-10-12 21:41:58] 2025-10-13 01:41:36,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:41:58] 2025-10-13 01:41:37,364 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:41:58] 2025-10-13 01:41:37,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:41:58] 2025-10-13 01:41:37,371 [wrapper] pilotpid: 1832841
[2025-10-12 21:41:58] 2025-10-13 01:41:37,373 [wrapper] Pilot exit status: 0
[2025-10-12 21:41:58] 2025-10-13 01:41:37,494 [wrapper] pandaids: 6840182604
[2025-10-12 21:41:58] 2025-10-13 01:41:38,017 [wrapper] cleanup supervisor_pilot 2758388 1832842
[2025-10-12 21:41:58] 2025-10-13 01:41:38,028 [wrapper] Test setup, not cleaning
[2025-10-12 21:41:58] 2025-10-13 01:41:38,032 [wrapper] apfmon messages muted
[2025-10-12 21:41:58] 2025-10-13 01:41:38,059 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:41:58] 2025-10-13 01:41:38,108 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:41:58]  *** Error codes and diagnostics ***
[2025-10-12 21:41:58]     "exeErrorCode": 0,
[2025-10-12 21:41:58]     "exeErrorDiag": "",
[2025-10-12 21:41:58]     "pilotErrorCode": 0,
[2025-10-12 21:41:58]     "pilotErrorDiag": "",
[2025-10-12 21:41:58]  *** Listing of results directory ***
[2025-10-12 21:41:58] total 414080
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:53 queuedata.json
[2025-10-12 21:41:58] -rwx------. 1 boincer umatlas     36292 Oct 12 10:53 runpilot2-wrapper.sh
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:41:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:18 run_atlas
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:18 job.xml
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas 219706033 Oct 12 16:18 EVNT.46676267._004542.pool.root.1
[2025-10-12 21:41:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:18 shared
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 16:18 input.tar.gz
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:18 start_atlas.sh
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:18 boinc_lockfile
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 16:19 pandaJob.out
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas    975536 Oct 12 16:20 agis_schedconf.cvmfs.json
[2025-10-12 21:41:58] drwx------. 5 boincer umatlas      4096 Oct 12 16:20 pilot3
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas      6899 Oct 12 21:37 init_data.xml
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas 194994290 Oct 12 21:38 HITS.46676269._081419.pool.root.1
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:38 boinc_task_state.xml
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas      1045 Oct 12 21:40 memory_monitor_summary.json
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas    495309 Oct 12 21:40 log.46676269._081419.job.log.tgz.1
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas      7799 Oct 12 21:40 heartbeat.json
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas        95 Oct 12 21:41 pilot_heartbeat.json
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas      5010 Oct 12 21:41 pilotlog.txt
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas   2208222 Oct 12 21:41 log.46676269._081419.job.log.1
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas       357 Oct 12 21:41 output.list
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:41 runtime_log
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas   2723840 Oct 12 21:41 result.tar.gz
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas       659 Oct 12 21:41 sipKDmSdCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCLkNDmAyCDRm.diag
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 21:41 runtime_log.err
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:41 wrapper_checkpoint.txt
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:41 boinc_mmap_file
[2025-10-12 21:41:58] -rw-r--r--. 1 boincer umatlas     21143 Oct 12 21:41 stderr.txt
[2025-10-12 21:41:58] HITS file was successfully produced:
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas 194994290 Oct 12 21:38 shared/HITS.pool.root.1
[2025-10-12 21:41:58]  *** Contents of shared directory: ***
[2025-10-12 21:41:58] total 408232
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas 219706033 Oct 12 16:18 ATLAS.root_0
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 16:18 input.tar.gz
[2025-10-12 21:41:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:18 start_atlas.sh
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas 194994290 Oct 12 21:38 HITS.pool.root.1
[2025-10-12 21:41:58] -rw-------. 1 boincer umatlas   2723840 Oct 12 21:41 result.tar.gz
21:42:00 (1827440): run_atlas exited; CPU time 33904.277671
21:42:00 (1827440): called boinc_finish(0)

</stderr_txt>
]]>

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