Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:16 (2728): wrapper (7.7.26015): starting
23:55:16 (2728): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:55:16] Arguments: --nthreads 8
[2025-10-12 23:55:16] Threads: 8
[2025-10-12 23:55:16] Checking for CVMFS
[2025-10-12 23:55:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:55:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:55:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:55:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:55:16] 2.11.0.0 13282 1319 63340 151638 1 57 1909281 4096001 0 130560 0 1198302 99.453 716541 933 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 23:55:16] CVMFS is ok
[2025-10-12 23:55:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:55:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:55:16] Further information can be found at the LHC@home message board.
[2025-10-12 23:55:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:55:16] Checking for apptainer binary...
[2025-10-12 23:55:16] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 23:55:16] apptainer is not installed, using version from CVMFS
[2025-10-12 23:55:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:55:16] WARNING: Environment variable TMPDIR already has value [/tmp/job_10531863/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node022
[2025-10-12 23:55:16] apptainer works
[2025-10-12 23:55:16] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:55:16] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:55:16] Starting ATLAS job with PandaID=6840225093
[2025-10-12 23:55:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10531863/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:43:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:43:33]  replicas=None
[2025-10-13 00:43:33]  scope=mc23_13p6TeV
[2025-10-13 00:43:33]  status=None
[2025-10-13 00:43:33]  status_code=0
[2025-10-13 00:43:33]  storage_token=
[2025-10-13 00:43:33]  surl=/tmp/job_10531863/atlas/pilot/slots/0/PanDA_Pilot-6840225093/log.46676269._082387.job.log.tgz.1
[2025-10-13 00:43:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/70/log.46676269._082387.job.log.tgz.1
[2025-10-13 00:43:33]  workdir=None
[2025-10-13 00:43:33] ]
[2025-10-13 00:43:33] 2025-10-12 22:42:20,606 | INFO     | monitor loop #208: job 0:6840225093 is in state 'stageout'
[2025-10-13 00:43:33] 2025-10-12 22:42:20,618 | WARNING  | aborting job monitor tasks since payload process 16857 is not running
[2025-10-13 00:43:33] 2025-10-12 22:42:20,620 | INFO     | transferring file log.46676269._082387.job.log.tgz.1 from /tmp/job_10531863/atlas/pilot/slots/0/PanDA_Pilot-6840225093/log.46676269._082387.job.log.tgz.1 to /tmp/j
[2025-10-13 00:43:33] 2025-10-12 22:42:20,620 | INFO     | executing command: /usr/bin/env mv /tmp/job_10531863/atlas/pilot/slots/0/PanDA_Pilot-6840225093/log.46676269._082387.job.log.tgz.1 /tmp/job_10531863/atlas/pilot/sl
[2025-10-13 00:43:33] 2025-10-12 22:42:20,630 | INFO     | adding to output.list: log.46676269._082387.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/70/log.46676269._082387.job.log.tg
[2025-10-13 00:43:33] 2025-10-12 22:42:20,630 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:43:33] 2025-10-12 22:42:20,630 | INFO     | summary of transferred files:
[2025-10-13 00:43:33] 2025-10-12 22:42:20,630 | INFO     |  -- lfn=log.46676269._082387.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:43:33] 2025-10-12 22:42:20,631 | INFO     | stage-out finished correctly
[2025-10-13 00:43:33] 2025-10-12 22:42:21,688 | INFO     | time since job start (2819s) is within the limit (172800.0s)
[2025-10-13 00:43:33] 2025-10-12 22:42:22,346 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:43:33] 2025-10-12 22:42:23,121 | INFO     | monitor loop #209: job 0:6840225093 is in state 'finished'
[2025-10-13 00:43:33] 2025-10-12 22:42:23,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:43:33] 2025-10-12 22:42:23,694 | INFO     | time since job start (2821s) is within the limit (172800.0s)
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | job 6840225093 has state=finished
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | preparing for final server update for job 6840225093 in state='finished'
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:43:33] 2025-10-12 22:42:23,812 | INFO     | job 6840225093 has finished - writing final server update
[2025-10-13 00:43:33] 2025-10-12 22:42:23,813 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:43:33] 2025-10-12 22:42:23,813 | INFO     | executing command: lscpu
[2025-10-13 00:43:33] 2025-10-12 22:42:23,856 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:43:33] 2025-10-12 22:42:25,624 | INFO     | monitor loop #210: job 0:6840225093 is in state 'finished'
[2025-10-13 00:43:33] 2025-10-12 22:42:25,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:43:33] 2025-10-12 22:42:25,700 | INFO     | time since job start (2823s) is within the limit (172800.0s)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,223 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:43:33] 2025-10-12 22:42:26,232 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2497.6072109375
[2025-10-13 00:43:33] 2025-10-12 22:42:26,243 | INFO     | using path: /tmp/job_10531863/atlas/pilot/slots/0/PanDA_Pilot-6840225093/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,243 | INFO     | extracted standard info from prmon json
[2025-10-13 00:43:33] 2025-10-12 22:42:26,243 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:43:33] 2025-10-12 22:42:26,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:43:33] 2025-10-12 22:42:26,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:43:33] 2025-10-12 22:42:26,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:43:33] 2025-10-12 22:42:26,244 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:43:33] 2025-10-12 22:42:26,244 | INFO     | sum of square deviations: 18381740.0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | sum of deviations: -1209822943.0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | mean x: 1760307608.0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | mean y: 2562750.2564102565
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | -- intersect: 115859958780.00389
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | intersect: 115859958780.00389
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | chi2: 0.05064533903580064
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | -- intersect: 115859958780.00389
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | current memory leak: -65.82 B/s (using 39 data points, chi2=0.05)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | could have reported an average CPU frequency of 2517 MHz (5 samples)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | ..............................
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . Timing measurements:
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . get job = 0 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . initial setup = 1 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . payload setup = 3 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . stage-in = 0 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . payload execution = 2795 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . stage-out = 0 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | . log creation = 0 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,245 | INFO     | ..............................
[2025-10-13 00:43:33] 2025-10-12 22:42:26,743 | INFO     | 
[2025-10-13 00:43:33] 2025-10-12 22:42:26,743 | INFO     | job summary report
[2025-10-13 00:43:33] 2025-10-12 22:42:26,743 | INFO     | --------------------------------------------------
[2025-10-13 00:43:33] 2025-10-12 22:42:26,743 | INFO     | PanDA job id: 6840225093
[2025-10-13 00:43:33] 2025-10-12 22:42:26,743 | INFO     | task id: 46676269
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | errors: (none)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | pilot state: finished 
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | transexitcode: 0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | exeerrorcode: 0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | exeerrordiag: 
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | exitcode: 0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | exitmsg: OK
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | cpuconsumptiontime: 19407 s
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | nevents: 400
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | neventsw: 0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | pid: 16857
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | pgrp: 16857
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | corecount: 8
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | event service: False
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | sizes: {0: 2348932, 1: 2348932, 3: 2349222, 11: 2349250, 2803: 2374716, 2804: 2374715, 2805: 2383927, 2807: 2383983, 2811: 2384209}
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | --------------------------------------------------
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | 
[2025-10-13 00:43:33] 2025-10-12 22:42:26,744 | INFO     | executing command: ls -lF /tmp/job_10531863/atlas/pilot/slots/0
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | job 6840225093 has completed (purged errors)
[2025-10-13 00:43:33] 2025-10-12 22:42:26,760 | INFO     | overall cleanup function is called
[2025-10-13 00:43:33] 2025-10-12 22:42:27,761 | INFO     | --- collectZombieJob: --- 10, [16857]
[2025-10-13 00:43:33] 2025-10-12 22:42:27,761 | INFO     | zombie collector waiting for pid 16857
[2025-10-13 00:43:33] 2025-10-12 22:42:27,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:43:33] 2025-10-12 22:42:27,761 | INFO     | collected zombie processes
[2025-10-13 00:43:33] 2025-10-12 22:42:27,761 | INFO     | will attempt to kill all subprocesses of pid=16857
[2025-10-13 00:43:33] 2025-10-12 22:42:27,925 | INFO     | process IDs to be killed: [16857] (in reverse order)
[2025-10-13 00:43:33] 2025-10-12 22:42:27,979 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:43:33] 2025-10-12 22:42:27,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:43:33] 2025-10-12 22:42:27,986 | INFO     | did not find any defunct processes belonging to 16857
[2025-10-13 00:43:33] 2025-10-12 22:42:27,990 | INFO     | did not find any defunct processes belonging to 16857
[2025-10-13 00:43:33] 2025-10-12 22:42:27,991 | INFO     | ready for new job
[2025-10-13 00:43:33] 2025-10-12 22:42:27,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:43:33] 2025-10-12 22:42:27,991 | INFO     | ***************************************
[2025-10-13 00:43:33] 2025-10-12 22:42:27,992 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:43:33] 2025-10-12 22:42:27,992 | INFO     | ***************************************
[2025-10-13 00:43:33] 2025-10-12 22:42:27,992 | INFO     | 
[2025-10-13 00:43:33] 2025-10-12 22:42:28,007 | INFO     | architecture information:
[2025-10-13 00:43:33] 2025-10-12 22:42:28,007 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:43:33] 2025-10-12 22:42:28,014 | INFO     | cat /etc/os-release:
[2025-10-13 00:43:33] NAME="CentOS Linux"
[2025-10-13 00:43:33] VERSION="7 (Core)"
[2025-10-13 00:43:33] ID="centos"
[2025-10-13 00:43:33] ID_LIKE="rhel fedora"
[2025-10-13 00:43:33] VERSION_ID="7"
[2025-10-13 00:43:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:43:33] ANSI_COLOR="0;31"
[2025-10-13 00:43:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:43:33] HOME_URL="https://www.centos.org/"
[2025-10-13 00:43:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:43:33] 
[2025-10-13 00:43:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:43:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:43:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:43:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:43:33] 
[2025-10-13 00:43:33] 2025-10-12 22:42:28,014 | INFO     | ***************************************
[2025-10-13 00:43:33] 2025-10-12 22:42:28,517 | INFO     | executing command: df -mP /tmp/job_10531863/atlas/pilot/slots/0
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | INFO     | sufficient remaining disk space (226705276928 B)
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | INFO     | update_server=False
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:43:33] 2025-10-12 22:42:28,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:43:33] 2025-10-12 22:42:28,635 | INFO     | all payload control threads have been joined
[2025-10-13 00:43:33] 2025-10-12 22:42:28,699 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:43:33] 2025-10-12 22:42:29,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:43:33] 2025-10-12 22:42:29,132 | INFO     | aborting loop
[2025-10-13 00:43:33] 2025-10-12 22:42:29,368 | INFO     | all data control threads have been joined
[2025-10-13 00:43:33] 2025-10-12 22:42:29,501 | INFO     | all job control threads have been joined
[2025-10-13 00:43:33] 2025-10-12 22:42:29,531 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:29,551 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:29,640 | INFO     | [payload] control thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:29,726 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,137 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,167 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,374 | INFO     | [data] control thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,459 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,506 | INFO     | [job] control thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,625 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,705 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,748 | INFO     | [job] validate thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:30,953 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:31,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:43:33] 2025-10-12 22:42:32,317 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:32,532 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:39,490 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:43:33] 2025-10-12 22:42:40,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:43:33] 2025-10-12 22:42:58,981 | INFO     | PID=8025 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:43:33] 2025-10-12 22:42:58,981 | INFO     | .. there are 3 such processes running
[2025-10-13 00:43:33] 2025-10-12 22:42:58,981 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:43:33] 2025-10-12 22:42:58,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:43:33] 2025-10-12 22:42:58,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:43:33] 2025-10-12 22:43:26,940 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:43:33] 2025-10-12 22:43:28,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062568192)>']
[2025-10-13 00:43:33] 2025-10-12 22:43:28,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:43:33] 2025-10-12 22:43:28,125 | INFO     | [monitor] control thread has ended
[2025-10-13 00:43:33] 2025-10-12 22:43:33,032 | INFO     | all workflow threads have been joined
[2025-10-13 00:43:33] 2025-10-12 22:43:33,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:43:33] 2025-10-12 22:43:33,032 | INFO     | traces error code: 0
[2025-10-13 00:43:33] 2025-10-12 22:43:33,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:43:33] 2025-10-12 22:43:33,130 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:43:33] 2025-10-12 22:43:33,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:43:33] 2025-10-12 22:43:33,133 [wrapper] pilotpid: 8025
[2025-10-13 00:43:33] 2025-10-12 22:43:33,134 [wrapper] Pilot exit status: 0
[2025-10-13 00:43:33] 2025-10-12 22:43:33,140 [wrapper] pandaids: 6840225093
[2025-10-13 00:43:33] 2025-10-12 22:43:33,178 [wrapper] cleanup supervisor_pilot 26274 8026
[2025-10-13 00:43:33] 2025-10-12 22:43:33,179 [wrapper] Test setup, not cleaning
[2025-10-13 00:43:33] 2025-10-12 22:43:33,181 [wrapper] apfmon messages muted
[2025-10-13 00:43:33] 2025-10-12 22:43:33,182 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:43:33] 2025-10-12 22:43:33,184 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:43:33]  *** Error codes and diagnostics ***
[2025-10-13 00:43:33]     "exeErrorCode": 0,
[2025-10-13 00:43:33]     "exeErrorDiag": "",
[2025-10-13 00:43:33]     "pilotErrorCode": 0,
[2025-10-13 00:43:33]     "pilotErrorDiag": "",
[2025-10-13 00:43:33]  *** Listing of results directory ***
[2025-10-13 00:43:33] total 405188
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      5112 Oct 12 17:35 queuedata.json
[2025-10-13 00:43:33] -rwx------ 1 mf493845 unix-user     36292 Oct 12 17:36 runpilot2-wrapper.sh
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user       100 Oct 12 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:43:33] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 22:59 run_atlas
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user       105 Oct 12 22:59 job.xml
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user 219598899 Oct 12 23:55 EVNT.46676267._004577.pool.root.1
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 23:55 start_atlas.sh
[2025-10-13 00:43:33] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 23:55 shared
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user    569680 Oct 12 23:55 input.tar.gz
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      6393 Oct 12 23:55 init_data.xml
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user         0 Oct 12 23:55 boinc_setup_complete
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      8192 Oct 12 23:55 boinc_mmap_file
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user         0 Oct 12 23:55 boinc_lockfile
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      2549 Oct 12 23:55 pandaJob.out
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    975528 Oct 12 23:55 agis_schedconf.cvmfs.json
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user   1560580 Oct 12 23:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:43:33] drwx------ 5 mf493845 unix-user       440 Oct 12 23:55 pilot3
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user 189917619 Oct 13 00:41 HITS.46676269._082387.pool.root.1
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      1018 Oct 13 00:42 memory_monitor_summary.json
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user        95 Oct 13 00:42 pilot_heartbeat.json
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    311420 Oct 13 00:42 log.46676269._082387.job.log.tgz.1
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      7778 Oct 13 00:42 heartbeat.json
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      4906 Oct 13 00:43 pilotlog.txt
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    443825 Oct 13 00:43 log.46676269._082387.job.log.1
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user       357 Oct 13 00:43 output.list
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user       620 Oct 13 00:43 runtime_log
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    778240 Oct 13 00:43 result.tar.gz
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user      9076 Oct 13 00:43 runtime_log.err
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user       644 Oct 13 00:43 583KDmSIDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAJUMDmnQUAWo.diag
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user     22302 Oct 13 00:43 stderr.txt
[2025-10-13 00:43:33] HITS file was successfully produced:
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user 189917619 Oct 13 00:41 shared/HITS.pool.root.1
[2025-10-13 00:43:33]  *** Contents of shared directory: ***
[2025-10-13 00:43:33] total 401260
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user 219598899 Oct 12 23:55 ATLAS.root_0
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 23:55 start_atlas.sh
[2025-10-13 00:43:33] -rw-r--r-- 2 mf493845 unix-user    569680 Oct 12 23:55 input.tar.gz
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user 189917619 Oct 13 00:41 HITS.pool.root.1
[2025-10-13 00:43:33] -rw------- 1 mf493845 unix-user    778240 Oct 13 00:43 result.tar.gz
00:43:34 (2728): run_atlas exited; CPU time 19465.733486
00:43:34 (2728): called boinc_finish(0)

</stderr_txt>
]]>

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